CSPI04G13310.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTTGTGAAGGGAGAAATCTGAGGTGGTTGAATGAGATTCACACACGTGAACCAACAAGGTACGATAAGAATTAAGAACTGCTATATCTTCTTCTAAGTAGGGCTGATTAACATAAATTGAGAGAAGACCATAGTTCAAATTCAATATGAGATGAGCCAAGCCAAGTGTCCTTATGCTGCCTTTTGTTGTTCTATCTATGTAGACACGATCGCACAACCTCTGCAAAACTACAATGGACTATCGAGACATGAAATACCAAAATAGCCCCTAAATTTGCTTCTAAATTTAGTTCGTAGTACGCGTGGCCTTTTGTAGTTCTACCTCCACAATACCAAAATTACCCCTAAATTTTACTAAAACAATTCTTCTTCGCAGCCCTAAATTCTTCTTCCTCACCAACTTCCAAGCACTTCCCGCTCCCTTCCGGCGCTTTTCCGGCCACCGTTTCTTGCTCATCCAAGGTTAGAAATCTATTCATTTTTCTTCTTCTTCACTCGTTATTCTATTTCATCTTACGTTTTTCTTTCTTGTCTCATTTTCTATTTCGCTTGGTTCTTATTTAATTATGTGTGGATCCACTATGTGTTTCTGTGCTGCTTTGGAGATTATTTTGGTACTTTTATCGTTGGATTTCTCCGTTTATCTCTCGTTTTTTTCCTTCTTTTTTCTGAAACCTTGATTCCTTTTCCATCGGTGTGAGATCAATTGATTCTGTTCATCGACTATAGATTCCTTGTTACTTTGGACGTTTCTGTTTATAAATTTAATCGATTATTTTTTGGATTTTGGTTTCCTTTTCTGAATTTGAATCTGTCGTTTATTTCGAAATCAAATTAGTGACTTTTTGAGTTTCCAATTTCTTCTATTTTTAGGCGTCTTTCTATCTCAACACCACTTAACTTCAACGTCTGTTCTAAATTTTCCCCTGATTATGTTCCTTCTCCATTCATCTAGTTCATCGACTTCAAGATCGTTATATCGAGTAGAGCACATTTAAAGTGGTGTTCTTATATTTCAGCTCTATTGCTACTTATAATCACAGCACTTATACGTCTAATTTATTTTTTTTCCCTTACAAACGTAGTCGTCATGAAGCCCCAAACAATTGTACTGTCGCAGTAAATCATGTTCTGGAGTTTTTCGATGCTAAAAAATGGGGAGATCCCCCTAAGCTCAAAATGCGGATGGCTCTTTGTTTTTTTCTTTTCGAAATAATCTCTGCATAGATGTTTTTGAAGTTTTTGTTTTGAAGAAAGCCACAGGCATCAAGCAGTGGACAATGGTGGCATGCGAAAAACACTTGATTGAGGTCATTACTGTCCAACCAAGAAAGAGAGCAAACTGAAGGCATGAGATAGTTGGATGCTATCATCCTTTGAAAATCATCAGAAGTACTAGACTACTGTTTGGCATAATCGATAAGAGGATGTCGATTCTCTTTGGACTTCCATAAAGCTGCAAAACCCTTCTTATTCAAAGGGGAAGAAGAAGGTAAGCCTCTGATAGGATTAATCCTATCAGTCTCTTGATTGGGATATCACAAAACGGAAGAATCTAGAGACAAAAATTGAATATGGTCAGTCATCAGTGGTGACAGCACTGACAGGTCGTTGAACGCACAACTTCTTTGTTTGAGAGCAGATATTTGAGGGTGTTCTCTAGCATCCTTCTGATGGAATGTAGGAAGCTAAGAAATTTTAGCTTTGTTAGTGGCTATTTCAAGAACCAAGTTCAATTGATTTTTTTGGCAAATATTAAATTTAGCTACCTAGCATGTATAAGGTGGCTATTGAAACTAGAGAGGAACTCGAGTTCAATTGACGGGAAATTATTCCTGAATGTGCTGATTTCCTAGTGAGAATTTCTAATCGAGGAGATAATGGCACATGCTTTAGCAAACCTTGTGGCTCCTTCGTTCACATTATGTGCAATGGTTGGAACTCTGATCCTTTCTCTGTCATCCTCTCCTTCCCTATTTCATACCCTCTGTTAAATTTTCTCTACTTAAGACCACAAATATGAAATTTGTTTATTCAGTATTACATTACCCTCTTGGCTTGTTTGTTACTTGGTTTCTGTAATTTTCTTGTGTCTTAATTTCTTGGTATCTTTTTGCATCTAGAGTGGCTTATGCCCAATTATATGGGTCAATTTTTTAATTGCCTTCTTTTGATTTTAGATTGTTCTGCTTCTTTTAAGCCGTGTCTGAAGTTATTTGCATATTCTGCATTTACCCATGGGGGAGGACGATAAGCAGGTACAATTTTGAGTTTCTATGCTGATAAACAAATTTATGTTTCTAAATTGTTTTAAGAATTATAGTTGAATGACTTGAAATTTGAAAATTTAAAATCACCATCTACAACTTGATTTAAAATAAATCCTGGATCTTTGAAGGGAAACCAATTTTACAACAATACAAAATTGAAAAAGAAAACAAAGAAAACAAACTTTAAAAATAATTGAAACATAATTTTATAAAAAGGGCCTTCTTTTTGTATCTCCTTGGATTATTTCATGTCAATGTAATAATTTCTTATCCAAAAAAAAAGAAAGAAATTGAAGCATAATTTTCTTAGTGGAAGCTATTCTTCTAAACAATTTCCTAACTGCCTTTTCATTTCTTTTACAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTCGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGGCAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAATAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGACTGTTTGTAAGGATATGGCTCCATCTAGAGAAGTGCTTGCATAAGCGATTAATTTTGTGTTAATGTAACCCACTTCTCTGATGAGGCATTTTCTTGGAATTTTATCGTCACTGCTGCAGTATTCCTGATCAATATTTTCTTTAGAATCTCTCTAGTTGGAAACGGCTGATGTTTCTTGATCAATTCAGCTTCTTGTTTCACTTAACTCTCAAGGCTTTTGTGTTAGATTCTAGGTTCTATATTTTAAATTCTTTTTTCTTTTTTGTCTTTCTTGTGTAATATACTCCGTGGTTAATATGATCGTACAGCCTGCAAAAGATGCTTGTTTGGGTTTTATCCCTCTTACGTCTATCCCTTTATCAAAGAATCAGTGTGGTTTTGGGGCTATGCTTACAATTTTCTTTATGTGATTATCACATTTCTTTATCTGTTTTGTAATTGTCTGAATCATATGCTGCCCGAGCTGCCGAGCATCAAGTTTTGCATCATTCGTATGAGCTTCCTTAGTAAAATTGGATATATTCATTTGATTGCGCTGACCCTCGTACGACCTCTAGATTCTGAATGTTCTTTTTCTTTTTTGTTGCCATTGATAAAATTGGCACTGCTACTAACATCTCTCATGTTCTTGATAACTCGGGTGCCAGTGGCTGAACAGGGCGCAGTTAGAATGGTTGAAAGGTATAAGCTGTAAGATTTTGCTTCCATGATCTGGGAAAAGGGCTGTTGCTGTATCCGGTAAGTTTACTTCTTGTGTAATGCTTCATTGGATACTCTAATGGAAGTATTTGTGACCTTTTCTTAACAATCTTATAAATTATTTTTCTGTCCTCAGTATTGTAATTAGCAAAATAATTTTGGTTGTGATTTTGAAGTTAGGGTTTGGCAGCTGCATGTGAAAGGCGGGCTTAGGTGGGTTTCCTCAACCAGGTTTTTGACAAGCACTACAATGTTGTTCTTCAGTAGTGCATTGATTTAAAATTTGACCTCTGCCTCCATACTCTAAACTGCCCTATTCTTTGTTGCCATTGATGTAAGCCTTCCATTAGGTACATACTAATGCTAAGTTGCCACAAACGGCAACTTCTCATTTGGACAATTTTCCATTTTTGTGTAGCAAGTACATCAACTTCTGTAATTATGCATCATTGATTTGTTTTCTTATTATTATTTAATAAAAAGTTGCATATTCTCTCCCTTTTCCTCA ATGGGGGAGGACGATAAGCAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTCGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGGCAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAATAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGA ATGGGGGAGGACGATAAGCAGGATAGACAAAAGATGGCAAATCTTCATCTAAGATCAGAAATGATTAGTATGGGACATCCACCTATGGCAAACCAGCCTCATGTAATCAATCAGTCTCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAAGCCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGGCAAATCTTCTGGCTCAACCTCAGGCCATGCAGCAATCCCAGATGATCATGAATCATTCTCTGCCACCTATGATGAGTGGCAACTATAAGGTGTGGGCACATCCACAAGCCCCTTTGGATCCCAACAAGAAGTACCGCAACTTCCCAAAACCTAGCTATGGAAATATGAAGCAATCAAGATCGGGTCGAGGCAATTGGAAGGGAAAAGGCGTTGGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACTGGGTTCCATAAGTGGTCCAAATAATGCTGCAGGTTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTAGAAAGTTTTACTCTAAAAAGAAGTTCGGCAATAGGTTTGCACCTTATGCACCTCGGAATACCACTTCTTTTTTAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCACTTGTGTCTCCTAGTCCTGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCACCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTACGGGGGTCTGAGAATAAGGTGGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACACTTGGAGGTAGAGCGCAGATTGGACCATGACTTGAGCCGATTTGAAATGATATACCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAGGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAGACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGATGATGTGAATGAGGAAGTAGTGGAGAATGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACGACACCAAGATGTTGATGTTGATTCTAAAGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAAAATGTGCGGGTGAAGATTTCAAGAGAGGGAAAGTGGTTGAAGAGAAATACATAGTGAATGATGAAATGGTGAAGGAATCAAATGAACAGATTCCAGAACACTGTGTGGCAAAAGATGAAGAATTTAAGGGTGAACTTATTTCGAGGAAGGTAAATGAATGTGACAATATGAATGAAAACTTGGGTAATATTCTGCACACGGATTCAGGGGTTGGAAGTGTAGCCATGGCCAATGATGAAGCAGAACAGAATAGAGTTGTACCTGTAAAAATAGCTTTAGATGTAAAGGAAGGATGTGAAGAAACAAGGGAGGATTCTGTATCAGGAAACTGA
BLAST of CSPI04G13310.1 vs. TrEMBL
Match: A0A0A0L0I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286320 PE=4 SV=1) HSP 1 Score: 1046.6 bits (2705), Expect = 1.1e-302 Identity = 543/546 (99.45%), Postives = 544/546 (99.63%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. TrEMBL
Match: A0A0A0KZ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286340 PE=4 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 2.9e-175 Identity = 340/428 (79.44%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. TrEMBL
Match: A0A151RX10_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031322 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 8.1e-125 Identity = 286/539 (53.06%), Postives = 365/539 (67.72%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. TrEMBL
Match: I1NJ98_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G244700 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 6.0e-120 Identity = 289/528 (54.73%), Postives = 344/528 (65.15%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. TrEMBL
Match: A0A0B2R002_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032868 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 6.0e-120 Identity = 289/528 (54.73%), Postives = 344/528 (65.15%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. TAIR10
Match: AT5G19900.1 (AT5G19900.1 PRLI-interacting factor, putative) HSP 1 Score: 343.2 bits (879), Expect = 3.0e-94 Identity = 249/512 (48.63%), Postives = 308/512 (60.16%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. NCBI nr
Match: gi|778693053|ref|XP_011653569.1| (PREDICTED: uncharacterized protein LOC101211007 [Cucumis sativus]) HSP 1 Score: 1046.6 bits (2705), Expect = 1.5e-302 Identity = 543/546 (99.45%), Postives = 544/546 (99.63%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. NCBI nr
Match: gi|659097701|ref|XP_008449767.1| (PREDICTED: uncharacterized protein LOC103491553 [Cucumis melo]) HSP 1 Score: 1020.0 bits (2636), Expect = 1.5e-294 Identity = 531/546 (97.25%), Postives = 534/546 (97.80%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. NCBI nr
Match: gi|778693057|ref|XP_004142245.2| (PREDICTED: uncharacterized protein LOC101217509 [Cucumis sativus]) HSP 1 Score: 623.2 bits (1606), Expect = 4.2e-175 Identity = 340/428 (79.44%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. NCBI nr
Match: gi|659097693|ref|XP_008449762.1| (PREDICTED: uncharacterized protein LOC103491551 [Cucumis melo]) HSP 1 Score: 620.5 bits (1599), Expect = 2.7e-174 Identity = 337/428 (78.74%), Postives = 365/428 (85.28%), Query Frame = 1
BLAST of CSPI04G13310.1 vs. NCBI nr
Match: gi|1021568446|ref|XP_016175447.1| (PREDICTED: uncharacterized protein LOC107618036 [Arachis ipaensis]) HSP 1 Score: 457.2 bits (1175), Expect = 4.0e-125 Identity = 304/558 (54.48%), Postives = 359/558 (64.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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