CSPI04G13210.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAATAGAAGGAGAACATCCAAAATTAAGTGTGAAGATGGATTTTGGTATATGGTGGAAATTAAGGTGAACGAGTGGCGCAAACCACAGAGAAGATCATGGCTTCTTCTTCTCATCTATCCGCCATTCCCCTCCGCCGTCCCTCTTCCTCCTCTCCACCTTCCTTATCCCACTGTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTGCAACTTTCTTGGAATTTATGCCCAATTGTCGACTATACTGTATCCTTGCGTTGTTGCATACTTCTATCCCCCATCTCCTCTGTTCAATTTATATTTTTGTATTTCTTTTCCGTTTTGCCCATTCAGTTGTTTTGTTTCTTACTTATCGGTGGAAGAATGTGATTTTTCTTTTTGGTTGAAAAGCTGATTTTCCTTCGGTCATTTCTTTTTTGTGGACTGCTTGTGTAATCTTATCCCTTTCTTCTCGAGTTTCGTTTTTGGTGTTTGTCATCCTCATCTCCTATTGTTATTTCGGGTTATCTTAATCTTGCTCTGTCACATGTTTTGTGCTGCCTGATTTGCTTATATTCATTTTCCCTTTATGCTCTGTGATAATACTATCTTACTCAGCTGGTTAACCACAAGTGTTAGAATTAAGTAATCTTTTTTCTCAGTTCCAAAGGGGTATTTTGTTTAAGTAGTTCATCAGATCTCCTTCCAATAGTTATGGAAGGTCATTCTAAATTGAAGTTGCCAACGCTTTCCTTTAAACAGAATGGAACCCCATCGTCAGGACCTCATCCCATAAGTTCTATTGCCTTATATGAGATGCTGGACTTGTTAACGTTTTCATGTGTATGTCAATCTAATGCCTAGATTGGTGCGATTTTGCAGTAAATTAGAAGGTTAAGTCAAGATAGCATTACATGATGAAATGCTTTGGTAGTAGTGCAGAATCATAACGATATTTTCTGGTTCTTGTACTAATCTGACATTGATTTGTATTGGACTGTCTTAAATATATCGATCATTCCATGGAAAAGCTTTGACACTCATTTTTCTGAATTCAGCAGCTAACTTAAAGCCTGTTGTGCTTCATGTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGGGATTCAAAAACACCATCAAAACCGCTGAAGGTAAGGATCTAGGTTACTTTTTTGTCTTGTTAGCTTTATTTCTTCGTAGTGACAGCTTATTCATGATATCAATACACGCTTAAGTAATTAACAAACACAGCGCTCCAAATGGGGAAGCAACATGTTGAGCTTATATATGTGTAGTTCCTCACATGATGTGCGTCTTTTGACATGGCTTGCGTAGCCTTCCAAATTTTTAAATGTGGGTGGTCGAAAAATGTAAAATTCCATTGGAATCTGACAAGGTTCTAAAGCCTTGTAGACTTTCTCATTAGTTTTTCAAAGCAATCAATTAACCATCTTTTAGACAGTGTTACCTTAAATGCATTTTCAAGTCTCTGTGATTTGATGTTTTAAGAATATAAATCTGATCATCTCTCTGTGACAGCATTGAGACGGGAACGTGTAGCTTTTTTAATATGTAATCTTAAGTAGGTTACTGCACTTTTGTCGTCCAATTAGTTATATATAACAACCTTTGTGACCACAGGGAACTCAAAAGTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACGTTGATGAAGAGTTATGGGGGCACGGTGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGCGTGCCGAAATTGTGGAGGAAGTGGTGCTGTACTTTGTAAGCATGTCTTCTTCTTTTTTATTATTTGTTAGAAATAACAGCTTTTGGTCGTTAGATATAATTTTTATTCTTCTTTCATGAAAGGCCTGTGATTTAAAAGTAATGAGCTTCTCCATGGACTTATAAAATTTAGAAGTCAAGGAAATAAAGCATATATACCGAACTTGAAAAGAAATATTTTGGTAAAGATAAAGTTATTTGTGTATTCTTTTGTAAAAAAAGTTCTTCAAGTTCTCTTTCAAACACGTTGTAAAAAAAAACTTACATCATTTTGGCATCCTTTTCATTGTTCATGTATTCGGACAAAAAAATCATCAAATACTTCCTCATATGAGCTTATCTTTGGAGTTAAAATACTTCTTTCCTTTTCTTTTCTTATCTTCCTCGCTTTGAGTTTTTCCTCTCTAAAGATGTATAGAAGTTTGATGAGACATACATTTTTTTTTATCTATCTATGCTCCCTATTTTCCATGGGATGCTTACTTTTCTTTGTTTTAGGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAACTATTCATCTTGCTTACAAATTATGGTGACCTCATTAATGAATGTTTCATAAATCTGCATGGTTTCAGTTTGATACAACTTCACGTCTGTTTAAAAGCATTGTCCTGTCCTCTTGTAATGCTGTAGCCTTGAGACATAGAAAATCGATTTCTCTCTCTCTCTCTCTTTAATGTCCAGAAATATAGACCATGGCGAATGGTCAATGTTTTGATTCACCATGTTCTCTCATATGATCAAGTCGTGGTTAGATATTAAAACTAAAACATTCCTTGGGTGTCAATATGCTGTTAAACCCACTGTGAAATCTGAAGCAAGAATCTTGGTTTCTTTGTTGCATTCATCACTTGTCTTTGTTACCGACTGACAATTTCTGTATTGACCAACTACAACTGGCAACTAGAGAAAATTCTTGATTCATATGGATTTGAAATGTATCACATTTAAACTTCCAATATCTGTGCTCATCTCTTACCCTCTGTACTAACTTTCAAAATTTATTGTGACAGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGGACTGGTTTACCAAACAACAAAGGTCTCCTAAGAAGGCCCGACGCACGACAATTGCTTGATAAGATGTACAACGGTCGCTTATTACCAAATTCCTGAACTTCATCTCTCCTTGCAAAATTGGCTCCATGCCCATAGATGGTAATAGATGTATAACTTGTTTCTAGTTGGTAGAAGTTACCTAATTGCGGCTTTTGTCATGGTTGCTTCATGACGGAGTTCAGTGAGTGGAAAAACATAGCTATGGAGTTAGACGGCAATCTTGTTTACAGCCTCTAGTCGTCAAATGCATATTGTTTATACCAAAGAGAAAGCATAATCATATCAATTTCAACCTATATTATAAATATGGAAGTCTGGTTATTGCAAATGAATAGAAAAAATCGAAAGACTAAGAACTAATCTTGATGGATGTTAATCAGACATGGGCAACTTGATTACAAAAAAAGAAAAAGAAAAAAAAGAAAAAACCACAACTCTCGACATTTTGGGGCTGCAAAGCCGTAGAGGAAACAATCAATTCCTCAAGTTTATAATTACTTCCATTTTGCACTGCCTCCCGTAGTGAATATAGAAGCTAAAGCCTTCCTCGAAAATGAAGCAGTAGATTTAAGTATACAACTCTCTGATATGATGCCAACCTAGTTCGAGTTTCGAGCGTGAATGTGGCTTCATATATCACGAATCCCGGACACTTATCACGGGCTGAAAGGCTTGAAGTTGCTTGCATTGCTATTCTCCAGCATAAATTCCGACAAACCCCATTCTTGTACATTGATATAGATCACTTACTGTTCAATGCTACAACATTT ATGGCTTCTTCTTCTCATCTATCCGCCATTCCCCTCCGCCGTCCCTCTTCCTCCTCTCCACCTTCCTTATCCCACTCAGCTAACTTAAAGCCTGTTGTGCTTCATGTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGGGATTCAAAAACACCATCAAAACCGCTGAAGGGAACTCAAAAGTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACGTTGATGAAGAGTTATGGGGGCACGGTGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGCGTGCCGAAATTGTGGAGGAAGTGGTGCTGTACTTTGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGGACTGGTTTACCAAACAACAAAGGTCTCCTAAGAAGGCCCGACGCACGACAATTGCTTGATAAGATGTACAACGGTCGCTTATTACCAAATTCCTGA ATGGCTTCTTCTTCTCATCTATCCGCCATTCCCCTCCGCCGTCCCTCTTCCTCCTCTCCACCTTCCTTATCCCACTCAGCTAACTTAAAGCCTGTTGTGCTTCATGTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGGGATTCAAAAACACCATCAAAACCGCTGAAGGGAACTCAAAAGTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACGTTGATGAAGAGTTATGGGGGCACGGTGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGCGTGCCGAAATTGTGGAGGAAGTGGTGCTGTACTTTGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGGACTGGTTTACCAAACAACAAAGGTCTCCTAAGAAGGCCCGACGCACGACAATTGCTTGATAAGATGTACAACGGTCGCTTATTACCAAATTCCTGA
BLAST of CSPI04G13210.1 vs. Swiss-Prot
Match: EDA3_ARATH (Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic OS=Arabidopsis thaliana GN=EDA3 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.1e-53 Identity = 115/190 (60.53%), Postives = 137/190 (72.11%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TrEMBL
Match: A0A0A0KX46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G285690 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.3e-103 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TrEMBL
Match: W9QT54_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005170 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.9e-66 Identity = 139/187 (74.33%), Postives = 151/187 (80.75%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TrEMBL
Match: M5WD03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012044mg PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64 Identity = 134/187 (71.66%), Postives = 147/187 (78.61%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TrEMBL
Match: A0A061GSA8_THECC (DnaJ/Hsp40 cysteine-rich domain superfamily protein OS=Theobroma cacao GN=TCM_040304 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.2e-61 Identity = 128/187 (68.45%), Postives = 146/187 (78.07%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TrEMBL
Match: B9T070_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0768760 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 8.1e-61 Identity = 125/188 (66.49%), Postives = 145/188 (77.13%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. TAIR10
Match: AT2G34860.1 (AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein) HSP 1 Score: 209.5 bits (532), Expect = 1.7e-54 Identity = 115/190 (60.53%), Postives = 137/190 (72.11%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. NCBI nr
Match: gi|449448800|ref|XP_004142153.1| (PREDICTED: uncharacterized protein LOC101213672 isoform X1 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 1.9e-103 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. NCBI nr
Match: gi|778693024|ref|XP_011653566.1| (PREDICTED: uncharacterized protein LOC101213672 isoform X2 [Cucumis sativus]) HSP 1 Score: 377.5 bits (968), Expect = 1.4e-101 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. NCBI nr
Match: gi|659097729|ref|XP_008449782.1| (PREDICTED: uncharacterized protein LOC103491567 [Cucumis melo]) HSP 1 Score: 357.1 bits (915), Expect = 1.9e-95 Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. NCBI nr
Match: gi|703087013|ref|XP_010093161.1| (hypothetical protein L484_005170 [Morus notabilis]) HSP 1 Score: 259.6 bits (662), Expect = 4.1e-66 Identity = 139/187 (74.33%), Postives = 151/187 (80.75%), Query Frame = 1
BLAST of CSPI04G13210.1 vs. NCBI nr
Match: gi|595829920|ref|XP_007205964.1| (hypothetical protein PRUPE_ppa012044mg [Prunus persica]) HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64 Identity = 134/187 (71.66%), Postives = 147/187 (78.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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