CSPI04G08440.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI04G08440.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGuanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
LocationChr4 : 6182414 .. 6191487 (+)
Sequence length639
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAATATCATAAAAATTTGGGATTATACGAAGAATATTTACAACCATGGATTCTCTGTAACTTTCCCAACCACTCACTTTCTTCTCTTCCAATTGTGAAATACGGTTGGTCCATTTCTCCATTTCTCCTTAACAAAATCACAAATACGATTGAGCCCTTTTCCCTCCTTTGTTTAATTTTTGGTTTTGGTTCACAATTTTTGATTCTCTTTTGAAGGAGAATCATCTGCTAGAATGCGCTCATGTCACCTTCGGAGCTCAACCACAGCCACTGTTTCCACTACTGTGATGTTCCCTCACAAGTTTTATTTCCGTTTTTCCCCAATTTTCCGGCCGAGGGTACTTGGTCGCTCCGTGAAATTCCGCCGCCTTTTTGATCGAATTAGTCCTGTACCTGTTGTTACTGCGTCCATCAATTCTGTCATCGCCTCTGGAAATGTTATTGCAGCTGCTGCAGCCGCTGCCTCCGGCTCTGGATCTGTTCATGGTGCTGTCACTTCTGCAATCACGCATGTTGCTGTTACGGCCGTCGCTATTGCCTCTGGAGCTTGTCTCTCTACAAAGGTGGATTTCCTTTGGCCCAAAGTGGAAGAGCAACCAGGTTTCATTTCATCATCCAAGTTTATTGTTGTTGCTATTATCGTTATCGTTGATATTACGTTTGGAGATTGGAACATGGTTAGAGGAAACGGGTTTTTTGGGGTGGGATTAGTTATTGATTAAGCTTCAAACGGTTTTACTAGTCAAGTTGCTGATAGACCACCCATCATACACCAATACAGTAGGAGAAGGAATAGGAAAGAGAAGAAGGAAGGGAAGTTGGTTATGTAACCAACTGCAGGTGGGGACCACAGGTGGTGGAGCGTCCACGCACGATCCACTGAGGGGGGACCACGGTAGGGGAGTGAGGGAGCGAATATAAATAAAGAAGAGAAGGAAAGGAGAGGGCACGATTTTTGGTTGTCAAGAATCCTACTGTTTAATTCTTGAAAGATAGAATAGCAGGTGAGGGAGAGGGAGCCGTCGACTGAGAGAATTCTGTATTTTCTTTGGCCAATTTTCATCTTAGTAATATCGCATATATTTCATCCGTCTATATTGAGAGTTGGAACGGTGAGGATCCATCAATTTGGTATCAGAGCCCGTCGATCCAAAAAGTAGTGGGGAAATCATGGTTCAAACCAGAAGTGAAGAGAGAAGAGACACACACGAACAAGAACTCAACAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATCTTAGTAATATCGCATATATTTCATCCTTCTATATTGAGAGTTGGAACGGTGAGGATCCATCAATTTGGTATCAGAGCCCGTCGATCCAAAAAGTAGTGGGGAAATCATGGTTCAAACCAGAAGTGAAGAGAGAAGAGACACACACGAACAATAACTCAACAAAATTCCGGTGATGGAGGAGAAAATTACTGTGATGTCGCAAAACATGGAAAACTTGCAGGCTCAAGTGGAGAAAACACACCAGATGGTGATGATCTTCATGGAGATGATGGCCAAGGAACGGGTACTAGCAAGCGGAAAAGGTATCGACTCGCCAGTACAAGAAACATGGATGGGAAAAACGGTGGAGGGAGAAAGTTCAGCAAGTAAAGAAACAACAAATGGGACGACAGAAAAGAAGGAAGACGGCGAAGGAGATGGCAATGATCGAAACAAATTCAAAAAAGTAGAAATGCCTGTATTCGATGGAGATGACCCAGATTCATGGCTGTTCCGAGCAGAGAGATACTTTCAAATACACAAACTAACGGATTCTAAAAAACTTACGGTTGCCACAATCAGCTTTGAAGGACCCGCACTCAACTGGTATCGATCGCAGGAGGAAAGAGACAAGTTCACCTGCTGGTTAAATTTAAAGGAGCGATTACTAATTCGATTTCGATCATCCCGCGAAGGCTCCTTGTACGGCCGGTTCTTGCGAATTCAGCAGGAATCAAGTATGGAAGAATATCGGAATCTCTTCGATAAGTGGGTGGCCCCATTATCGGATATTCCGGAAAAGATCGTGGAAGAGACATTCATGGGAGGATTGTTACCGTGGATTAAGGTAGAGATGGAGTTCTGCAATCCCGTGGGATTAGCCGAAATGCGCAAATGGTGGAACAACGAGAGATCCTGAGGAGGGAAGCAAATTTACCAGGATATTTGGGAATGAAAATCTCAAATAGCAGCTATCCTACAACCAAAACATATGCTGATTTAAAAGAACAGGGGAATAAGGGGAACACAGTATTTCCAATACGAACGATTACCCTGAGAGGATCGCCGACGAAGGAGATTAAGAAAGAAGGACTCTCTAGACGACTCAGACGCTGAATTCCAAGCCAAGAGAGAGAAGGGACTCTGTTTTAAGTGTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGAGCTGCAGCACGACCCGGGAGAAGTAGTAGAGTTATGTATTAACTCAGTAGTGGGATTGACAAATCCGGGAACCATGAAGATAAGAGGCACACTCCCAGGTAAGGAAGTCGTCGTGCTGGTCGATTGTGGAGCCACCCACAACTTCATATCCGATCGGCTAGTCAAGACACTGAAAATACCCACAAAAGACACTGCCAACTATGGGGTGATACTGGGGTCAGGAACAGCCATCAAAGGCAAGGGAGTGTGTGAAAAAGTAGAGTTGAATCTCATCGGATGGACAGTCGTGGAGAATTTCCTACCACTGGAACTAGGAGGGGTAGATTTGATATTGGGAATGCAATGGTTACATTCCTTGGGAGTGACGGAGATGGATTGGAGGAATCTAACCATGTCTTTCTTTCACAACAGTAGAAAAGTGGTGCTAAAAGGAGATCCAAGCTTGACTAAAACTCAAGTGAGTCTAAAAAATCTCACTAAATCATGGGTGGAAACGGATACGGGGTATCTGATCGAGTGCAGAACATTGGAGGCACGTCAAACTGAGATAAAAACTGAAGAGAACGAAATTGAACCGGAGGGCTTCAGGGCGGTTCTAACACAATATAAGGATGTCTTCGAGGAGCCTAAGGGACTGCCTCCCAGCAGGGATATTGAACACCATATACACATAAGGGGAGGAGCAGACCCGGTGAATGTCCGGCATTATCGGTACGCATTCCAACAGAAGGAAGAACTGGAAAAACTGGTGGACGAAATGATGGCGTCAGGAATTATACGCCCTAGCACAAGTCCCTACTCCAGTCCCGTTCTCTTGGTCAAGAAAAAAGATGGGAGCTGGCGATTCTGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGCGCTCATGTCACCTTCGGAGCTCAACCACAGCCACTGTTTCCACTACTGTGATGTTCCCTCACAAGTTTTATTTCCGTTTTTCCCCAATTTTCCGGCCGAGGGTACTTGGTCGCTCCGTGAAATTCCGCCGCCTTTTTGATCGAATTAGTCCTGTACCTGTTGTTACTGCGTCCATCAATTCTGTCATCGCCTCTGGAAATGTTATTGCAGCTGCTGCAGCCGCTGCCTCCGGCTCTGGATCTGTTCATGGTGCTGTCACTTCTGCAATCACGCATGTTGCTGTTACGGCCGTCGCTATTGCCTCTGGAGCTTGTCTCTCTACAAAGGTGGATTTCCTTTGGCCCAAAGTGGAAGAGCAACCAGGTTCTCTTGTATTGGATGGAGTTGACGTAACTGGATATCTTATATTTGAGGATACCAAGGTGCAAAAGGCTATTGAGTTTGCAAAAAAGGCTCATCATGGACAGCTGCGGAAAACTGGAGACCCTTATTTAACTCATTGCATCCACACTGGAAAAATCTTAGCTGCTTTAGTTCCACCCACCGGTAACAGGGTGCTATCAAACAAATACTACAGAACTCCAAAATTCTTTACCACATTTCCTACAAAAGAAGGGTATTTCAGAAATGACTGA

Coding sequence (CDS)

ATGCGCTCATGTCACCTTCGGAGCTCAACCACAGCCACTGTTTCCACTACTGTGATGTTCCCTCACAAGTTTTATTTCCGTTTTTCCCCAATTTTCCGGCCGAGGGTACTTGGTCGCTCCGTGAAATTCCGCCGCCTTTTTGATCGAATTAGTCCTGTACCTGTTGTTACTGCGTCCATCAATTCTGTCATCGCCTCTGGAAATGTTATTGCAGCTGCTGCAGCCGCTGCCTCCGGCTCTGGATCTGTTCATGGTGCTGTCACTTCTGCAATCACGCATGTTGCTGTTACGGCCGTCGCTATTGCCTCTGGAGCTTGTCTCTCTACAAAGGTGGATTTCCTTTGGCCCAAAGTGGAAGAGCAACCAGGTTCTCTTGTATTGGATGGAGTTGACGTAACTGGATATCTTATATTTGAGGATACCAAGGTGCAAAAGGCTATTGAGTTTGCAAAAAAGGCTCATCATGGACAGCTGCGGAAAACTGGAGACCCTTATTTAACTCATTGCATCCACACTGGAAAAATCTTAGCTGCTTTAGTTCCACCCACCGGTAACAGGGTGCTATCAAACAAATACTACAGAACTCCAAAATTCTTTACCACATTTCCTACAAAAGAAGGGTATTTCAGAAATGACTGA
Homology
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BLAST of CSPI04G08440.1 vs. Swiss-Prot
Match: RSH3L_ARATH (Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana GN=RSH3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-07
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 137 IFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILA 178
           IFED  V KA   A+KAH GQ+R TGDPYL HC+ T  +LA
Sbjct: 209 IFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLA 249

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BLAST of CSPI04G08440.1 vs. Swiss-Prot
Match: RSH3C_ARATH (Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana GN=RSH3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-07
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 137 IFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILA 178
           IFED  V KA   A+KAH GQ+R TGDPYL HC+ T  +LA
Sbjct: 209 IFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLA 249

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BLAST of CSPI04G08440.1 vs. TrEMBL
Match: A0A0A0KXQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092440 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.0e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND 213
           PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND
Sbjct: 181 PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND 212

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BLAST of CSPI04G08440.1 vs. TrEMBL
Match: M0ZIH7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000537 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.5e-53
Identity = 120/175 (68.57%), Postives = 141/175 (80.57%), Query Frame = 1 

Query: 19  MFPHK--FYFRFSPI---FRPRVLGRSVKFRRLFDRISPVPVVTASINSVIASGNVIAAA 78
           MF H+     R +P+   F  + L R+VKFR + D+I P   V++S++SV+ SGN IAAA
Sbjct: 1   MFCHRRALILRKNPLLLFFPCQGLRRNVKFRCVLDQIVPKFTVSSSLSSVLTSGNAIAAA 60

Query: 79  AAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEEQPGSLVLDGVDVT 138
           AA + GS  VHGAVTSAIT VAVTAVAIASGACLSTKVDFLWPKV+EQPGSL+LDGVDVT
Sbjct: 61  AAVSGGS--VHGAVTSAITQVAVTAVAIASGACLSTKVDFLWPKVDEQPGSLLLDGVDVT 120

Query: 139 GYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALVPPTGNRVL 189
           GY IF D KVQKAI FA+KAH+GQLR+TG+PYLTHCIHTGKI+A LVPPTG R +
Sbjct: 121 GYPIFNDDKVQKAIAFARKAHYGQLRRTGEPYLTHCIHTGKIVAVLVPPTGKRAI 173

[Close]
BLAST of CSPI04G08440.1 vs. TrEMBL
Match: A0A0V0IWA3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 120/177 (67.80%), Postives = 142/177 (80.23%), Query Frame = 1 

Query: 17  TVMFPHK--FYFRFSPI---FRPRVLGRSVKFRRLFDRISPVPVVTASINSVIASGNVIA 76
           + MF H+     R +P+   F  + L R+VKFR + D+I P   V++S++SV+ SGN IA
Sbjct: 7   STMFCHRRALILRKNPLLLFFPCQGLRRNVKFRCVLDQIVPKFTVSSSLSSVLTSGNAIA 66

Query: 77  AAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEEQPGSLVLDGVD 136
           AAAA + GS  VHGAVTSAIT VAVTAVAIASGACLSTKVDFLWPKV+EQPGSL+LDGVD
Sbjct: 67  AAAAVSGGS--VHGAVTSAITQVAVTAVAIASGACLSTKVDFLWPKVDEQPGSLLLDGVD 126

Query: 137 VTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALVPPTGNRVL 189
           VTGY IF D KVQKAI FA+KAH+GQLR+TG+PYLTHCIHTGKI+AALVP TG R +
Sbjct: 127 VTGYSIFSDDKVQKAIAFARKAHNGQLRRTGEPYLTHCIHTGKIVAALVPSTGKRAI 181

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BLAST of CSPI04G08440.1 vs. TrEMBL
Match: A0A022PW27_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a001298mg PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.5e-52
Identity = 117/188 (62.23%), Postives = 142/188 (75.53%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           M SCH  +   +  ++ ++  + F+F           G+S KFRRL   I+P   V+AS+
Sbjct: 1   MSSCHTSTMFVSPKTSLILRRNPFFF-----------GKSPKFRRLLGPIAPKFAVSASL 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
            +V+ SGNVIAAAA+A  GSGS+HGAV+SAIT VAVTAVAIASGACLSTKV+FLWPKV+E
Sbjct: 61  GTVLVSGNVIAAAASA--GSGSLHGAVSSAITQVAVTAVAIASGACLSTKVEFLWPKVDE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGS VLDGVDVTGY IF D KVQKAI FA+KAH GQ+RKTG+PYL+HCIHTGKI+A LV
Sbjct: 121 QPGSHVLDGVDVTGYPIFNDGKVQKAIAFARKAHQGQIRKTGEPYLSHCIHTGKIVAVLV 175

Query: 181 PPTGNRVL 189
           P  G R +
Sbjct: 181 PSNGKRAI 175

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BLAST of CSPI04G08440.1 vs. TrEMBL
Match: K4BJA8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.6e-52
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 1 

Query: 17  TVMFPHK--FYFRFSPI---FRPRVLGRSVKFRRLFDRISPVPVVTASINSVIASGNVIA 76
           + MF H+     R +P+   F  + L R+VKFR + D+I P   V++S++SV+ SGN IA
Sbjct: 7   STMFCHRSALILRKNPLLLFFPCQGLRRNVKFRCVLDQIVPKFTVSSSLSSVLTSGNAIA 66

Query: 77  AAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEEQPGSLVLDGVD 136
           AAAA + GS  VHGAVTSAIT VAVTAVAIASGACLSTKVDFLWPKV+EQPGSL+LDGVD
Sbjct: 67  AAAAVSGGS--VHGAVTSAITQVAVTAVAIASGACLSTKVDFLWPKVDEQPGSLLLDGVD 126

Query: 137 VTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALVPPTGNRVL 189
           VTGY IF D KVQKAI FA+KAH+GQLR+TG+PYLTHCIHTGKI+A LVP TG R +
Sbjct: 127 VTGYPIFNDDKVQKAIAFARKAHNGQLRRTGEPYLTHCIHTGKIVAVLVPSTGKRAI 181

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BLAST of CSPI04G08440.1 vs. TAIR10
Match: AT1G54130.1 (AT1G54130.1 RELA/SPOT homolog 3)

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 137 IFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILA 178
           IFED  V KA   A+KAH GQ+R TGDPYL HC+ T  +LA
Sbjct: 209 IFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLA 249

[Close]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match: gi|700198471|gb|KGN53629.1| (hypothetical protein Csa_4G092440 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 1.5e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND 213
           PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND
Sbjct: 181 PPTGNRVLSNKYYRTPKFFTTFPTKEGYFRND 212

[Close]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match: gi|778691723|ref|XP_011653337.1| (PREDICTED: uncharacterized protein LOC101208449 isoform X2 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 9.8e-96
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVL 189
           PPTGNR +
Sbjct: 181 PPTGNRAV 188

[Close]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match: gi|778691717|ref|XP_011653335.1| (PREDICTED: uncharacterized protein LOC101208449 isoform X1 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 9.8e-96
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVL 189
           PPTGNR +
Sbjct: 181 PPTGNRAV 188

[Close]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match: gi|659125916|ref|XP_008462919.1| (PREDICTED: uncharacterized protein LOC103501185 isoform X2 [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 6.4e-95
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLG SVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGHSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQ+RKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQMRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVL 189
           PPTGNR +
Sbjct: 181 PPTGNRAV 188

[Close]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match: gi|659125914|ref|XP_008462918.1| (PREDICTED: uncharacterized protein LOC103501185 isoform X1 [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 6.4e-95
Identity = 184/188 (97.87%), Postives = 186/188 (98.94%), Query Frame = 1 

Query: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGRSVKFRRLFDRISPVPVVTASI 60
           MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLG SVKFRRLFDRISPVPVVTASI
Sbjct: 1   MRSCHLRSSTTATVSTTVMFPHKFYFRFSPIFRPRVLGHSVKFRRLFDRISPVPVVTASI 60

Query: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120
           NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE
Sbjct: 61  NSVIASGNVIAAAAAAASGSGSVHGAVTSAITHVAVTAVAIASGACLSTKVDFLWPKVEE 120

Query: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQLRKTGDPYLTHCIHTGKILAALV 180
           QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQ+RKTGDPYLTHCIHTGKILAALV
Sbjct: 121 QPGSLVLDGVDVTGYLIFEDTKVQKAIEFAKKAHHGQMRKTGDPYLTHCIHTGKILAALV 180

Query: 181 PPTGNRVL 189
           PPTGNR +
Sbjct: 181 PPTGNRAV 188

The following BLAST results are available for this feature:
BLAST of CSPI04G08440.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RSH3L_ARATH3.8e-0760.98Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana GN=RSH3... [more]
RSH3C_ARATH3.8e-0760.98Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana GN=RSH3... [more]
BLAST of CSPI04G08440.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXQ6_CUCSA1.0e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G092440 PE=4 SV=1[more]
M0ZIH7_SOLTU5.5e-5368.57Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000537 PE=4 SV=1[more]
A0A0V0IWA3_SOLCH1.2e-5267.80Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
A0A022PW27_ERYGU3.5e-5262.23Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a001298mg PE=4 SV=1[more]
K4BJA8_SOLLC4.6e-5267.23Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of CSPI04G08440.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G54130.12.2e-0860.98 RELA/SPOT homolog 3[more]
BLAST of CSPI04G08440.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198471|gb|KGN53629.1|1.5e-112100.00hypothetical protein Csa_4G092440 [Cucumis sativus][more]
gi|778691723|ref|XP_011653337.1|9.8e-9698.94PREDICTED: uncharacterized protein LOC101208449 isoform X2 [Cucumis sativus][more]
gi|778691717|ref|XP_011653335.1|9.8e-9698.94PREDICTED: uncharacterized protein LOC101208449 isoform X1 [Cucumis sativus][more]
gi|659125916|ref|XP_008462919.1|6.4e-9597.87PREDICTED: uncharacterized protein LOC103501185 isoform X2 [Cucumis melo][more]
gi|659125914|ref|XP_008462918.1|6.4e-9597.87PREDICTED: uncharacterized protein LOC103501185 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015969 guanosine tetraphosphate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G08440CSPI04G08440gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G08440.1CSPI04G08440.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G08440.1.utr5p1CSPI04G08440.1.utr5p1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G08440.1.cds1CSPI04G08440.1.cds1CDS
CSPI04G08440.1.cds2CSPI04G08440.1.cds2CDS
CSPI04G08440.1.cds3CSPI04G08440.1.cds3CDS
CSPI04G08440.1.cds4CSPI04G08440.1.cds4CDS


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21262GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASEcoord: 93..179
score: 4.0
NoneNo IPR availablePANTHERPTHR21262:SF7SUBFAMILY NOT NAMEDcoord: 93..179
score: 4.0
NoneNo IPR availableunknownSSF109604HD-domain/PDEase-likecoord: 141..179
score: 9.7