CSPI04G05240.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G05240.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Protein REVERSION-TO-ETHYLENE SENSITIVITY1
Location	Chr4 : 3568329 .. 3570786 (+)
Sequence length	714

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTCATGATCAACCTCGGAATCAAATAAATGAATACAAACATTAAACGTAGAACAAAGTATAACCATCATCAGGAAGAGGGTTTCCAGTAAGGCCGAAATCTAAATTTCCGGCTTTCCAAAAACTGCGACAATCAATGGTTTTTTTATCCGACGATGATACAATCGGCGTAGAACTGCCTCGTTGCTCTTGGAGTCTCGTCACAGATTTCGTTTTTTTGTTTGACATTGAGTTAGCTGCAGTTTCCTCATCGTCGCTGCTTGTTAAAACCACCACATCAGGAGGCGTGCTTCCCGTCTTCCGCGGCATCAGAACTTCGCCGGAGTTTCCCCCGAACAGAAACTACTTAGAAATACGTTCTGAATTCTGAACTTCGTCTCAGTTCTTTTAAAAAAAGCGCAAAAGTAGAAAACGGCGTCGTTTCGGTTCTCTTGGATTTAACATATACCAAAATCAATTTTAACAACCCCCCGTCTCAACTTTGGAAACCGATCAAATTGATCGGTGATCAGGGAAGTTGCTTCACACGATCTTTCTTGGATTCTTCACCAAAATTATTCTGATTGGTAACTTCAACTTTCTTTCACACTTCTCTTCAGAAATTTGTTTGTTTGTACTTCAAATTCTTCGTGTAACTTGTTTGTTTTACCTGTTTGATTTGTGTTCTATGCACTTGGTATTTGACTATCCTAAAGTTGAGGAGATTTGGGAACTTCATCTCGTTATTTGATTGTAGGTAGCCGAGGGGTTTCCGTTTAACCTATTTTTTCAATTATGTTTTCTGAATCGAGATGAGCATACGGGTCAATGGGTGCTTGCAATTCCAGCCTATGGCTGCTTCTCTAATAAATACTGGAAGTTACTACTCAACTTCATACAATGTCTTTCCCTCTTCTTTCTTCCTTCGCCCTTTGCAAGAATTCGTTTGAAAGTTTGGTTGAACAGCCTAATTTCGTTCTTCAAGATGAAATTTTGGCCTCTGTTTAAACTTTTTCTATTACATTCTCGCTATCTGCGGTCATCCTCCCAAAGCGGTTATAAGATTTGCTGAGATTATGAAATTGACGTAAGGAAATTGGGATCGTTTAAGGTTAGGTCAATTTTTTTGTTGAAGCTCTGTTAAATTAAGGGTATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTACAAGCTAATTTCCACAATTGAACTAAAGATCAATCCCTTACAATCATTTTTTACCCAACTGATTTCATCATATATTAGTGATATAATATTAGATCTAGCCTTATTTTTGGATCAATTCGTGATTTAACGTAGTATACATAGTCCAAAAGGTTTTGTGTTCAAACCCTACAATGTTATTTTCTCTAGTCTTGATTTTCACATGTTGGATCTCTTACATATTTCAAGCTCTACAAGTGAGTGAGGAGTGTTAGTAATATAATATTAAATTTGTTTGACCCATTAGCTCAAGATTTTTTGTTTAATTGGTGATTTAACAATGTACTCGACGTGCAGTGTAGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTAACACATTGGATTCTGGTAGTTAAGTGAAGGTCAATTGCTTTTCTTCGTTGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCATATGGCGTATTACATACCGTATAGGTAGGAGGCAAATCATTTGATGTAACTCACGACCGTGAATTCTGGCAGCTTGTTTAGGCCATTAATCAATAGAGTTCATGAAATGCTAATTAGATAAGTGATTATGATAAATCAAAATATCTAAATAAAATCGTTTGTACAATTTTAAATCA

mRNA sequence

ATGAAATTGACGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTAGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Coding sequence (CDS)

ATGAAATTGACGCAGCATTTTATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTAGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Homology

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BLAST of CSPI04G05240.1 vs. Swiss-Prot
Match: RTH_ARATH (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.7e-77
Identity = 140/232 (60.34%), Postives = 176/232 (75.86%), Query Frame = 1


Query: 13  ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 72
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 73  LDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRS-------EEELREVDHSREISTW 132
           LDFAGPNFVCVDNF FGAV+RY+QIN++  S  +  S         E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 133 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 192
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 193 AVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

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BLAST of CSPI04G05240.1 vs. Swiss-Prot
Match: RTE1_ARATH (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.3e-58
Identity = 111/210 (52.86%), Postives = 149/210 (70.95%), Query Frame = 1


Query: 33  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 92
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 93  RYLQINRDKC----SISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNC 152
           RYLQ++R KC    ++  H  +   +  D      TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 153 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 212
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 213 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 236
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

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BLAST of CSPI04G05240.1 vs. Swiss-Prot
Match: TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 1


Query: 34  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 93
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 94  YLQINRDKCSISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 153
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 154 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 205
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

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BLAST of CSPI04G05240.1 vs. Swiss-Prot
Match: TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.5e-31
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 1


Query: 34  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 93
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 94  YLQINRDKCSISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 153
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 154 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 205
             LN + +     WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

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BLAST of CSPI04G05240.1 vs. TrEMBL
Match: A0A0A0KXZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.3e-127
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKC ISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

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BLAST of CSPI04G05240.1 vs. TrEMBL
Match: A0A103Y5G2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.3e-91
Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 1


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           MES  +P + +MIE  + QNM+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAH-----RSEEELREVDHSREISTWD 131
           ILDFAGPNFVCVDNFTFGAVARY+QI+++KCSI+ H     RSEEE R V+  R   TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 132 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 191
           DAL++STQE+QHR YN+LTCNCHSFVA+NLNRL F+ GGWNVVN+AALI LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 192 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +IR ++PFV++F +G+  G   FLTFLAFF   LVGWFILGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

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BLAST of CSPI04G05240.1 vs. TrEMBL
Match: F6GWR6_VITVI (C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 9.7e-91
Identity = 163/231 (70.56%), Postives = 191/231 (82.68%), Query Frame = 1


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           M+S+ DPE+ +MIE +++Q M+IDP RARFPCCIVWTPLPVISWL+PF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRSEEELREVDHSRE-----ISTWD 131
           ILDFAGPNFVCVDNF FGAV RY+QI+++KC IS H      RE    ++     I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 132 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 191
           DALR+STQEFQH++YNL TCNCHSFVANNLNRLGF  GGWNVVNLAALIFLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 192 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +I++FLPF +V ++GL  G  TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

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BLAST of CSPI04G05240.1 vs. TrEMBL
Match: W9SD51_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90
Identity = 164/230 (71.30%), Postives = 190/230 (82.61%), Query Frame = 1


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           M+S  D ENQLM EG+ + N +IDP+RARFPCCIVWTPLPVISWLVPF+GHIGI REDGV
Sbjct: 1   MDSDADTENQLMAEGSSSPNFQIDPKRARFPCCIVWTPLPVISWLVPFVGHIGICREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCSI----SAHRSEEELREVDHSREISTWDD 131
           ILDFAGPNFVCVDNF FG VARYL I+  +C      S H+SE++ R+    REISTWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGVVARYLHISLHECYALPLPSLHKSEDQHRQDQPEREISTWDD 120

Query: 132 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 191
           ALR+ TQ FQHRAY+L TCNCHSFVANNLNRL F  GGWNVVNLAALIF+KG+WVSK ++
Sbjct: 121 ALRKGTQVFQHRAYSLFTCNCHSFVANNLNRLQFSNGGWNVVNLAALIFIKGKWVSKASM 180

Query: 192 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +R+FLPF+VVFS+G ALG ++FL FLA F  FLVGWF+ GTY FKNL+QL
Sbjct: 181 VRSFLPFLVVFSLGFALGGSSFLIFLALFIVFLVGWFLFGTYCFKNLIQL 230

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BLAST of CSPI04G05240.1 vs. TrEMBL
Match: M5VRS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010911mg PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 8.2e-90
Identity = 157/230 (68.26%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           ME+S  PE+ LMI+G+ +  ++IDP RARFPCCIVWTPLPVISWL+PFIGHIGI REDGV
Sbjct: 1   METSASPEHNLMIDGSASPTLQIDPRRARFPCCIVWTPLPVISWLIPFIGHIGICREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKC----SISAHRSEEELREVDHSREISTWDD 131
           ILDFAGPNFVCVDNF FGA  RY+QI+++KC    + S  +SE++ R+ +  R+I TWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAATRYIQISKEKCHSIPNPSVCQSEDQYRQDEPGRDIMTWDD 120

Query: 132 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 191
           ALR+ TQEFQHR+YN+LTCNCHSFVANNLNRLGF +GGWNVVNLAALIFLKG+WVS  ++
Sbjct: 121 ALRKGTQEFQHRSYNILTCNCHSFVANNLNRLGFCSGGWNVVNLAALIFLKGKWVSTASM 180

Query: 192 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +R+FLPF++ F +G+A   +TFLT+L FFT FLVGWF+LGTY FK+L+ L
Sbjct: 181 VRSFLPFLIAFGLGVAFAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIHL 230

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BLAST of CSPI04G05240.1 vs. TAIR10
Match: AT3G51040.1 (AT3G51040.1 RTE1-homolog)

HSP 1 Score: 288.1 bits (736), Expect = 4.9e-78
Identity = 140/232 (60.34%), Postives = 176/232 (75.86%), Query Frame = 1


Query: 13  ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 72
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 73  LDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRS-------EEELREVDHSREISTW 132
           LDFAGPNFVCVDNF FGAV+RY+QIN++  S  +  S         E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 133 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 192
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 193 AVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of CSPI04G05240.1 vs. TAIR10
Match: AT2G26070.1 (AT2G26070.1 Protein of unknown function (DUF778))

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-59
Identity = 111/210 (52.86%), Postives = 149/210 (70.95%), Query Frame = 1


Query: 33  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 92
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 93  RYLQINRDKC----SISAHRSEEELREVDHSREISTWDDALRRSTQEFQHRAYNLLTCNC 152
           RYLQ++R KC    ++  H  +   +  D      TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 153 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 212
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 213 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 236
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]

BLAST of CSPI04G05240.1 vs. NCBI nr
Match: gi|449457506|ref|XP_004146489.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus])

HSP 1 Score: 463.8 bits (1192), Expect = 1.9e-127
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKC ISAHRSEEELREVDHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CSPI04G05240.1 vs. NCBI nr
Match: gi|659102422|ref|XP_008452120.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 456.4 bits (1173), Expect = 3.0e-125
Identity = 225/230 (97.83%), Postives = 228/230 (99.13%), Query Frame = 1


Query: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAHRSEEELREVDHSREISTWDD 127
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKC ISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of CSPI04G05240.1 vs. NCBI nr
Match: gi|657948444|ref|XP_008337789.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica])

HSP 1 Score: 343.2 bits (879), Expect = 3.6e-91
Identity = 161/241 (66.80%), Postives = 201/241 (83.40%), Query Frame = 1


Query: 1   MKLTQHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFI 60
           +K+      L ME+S  PE+ L I+G+ +  ++IDP+R+RFPCCIVWTPLPVISWLVPF+
Sbjct: 20  LKILCQLPILAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFV 79

Query: 61  GHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKC----SISAHRSEEELREV 120
           GHIGI REDGVILDFAGPNFVCVDNF+FGA  RY+QIN++KC     +S ++SE++  E 
Sbjct: 80  GHIGICREDGVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGEN 139

Query: 121 DHSREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF 180
           +  R+I TWDDAL++ TQEFQHRAYNL TCNCHSFVANNLNRLGFR+GGWNVVNLAALIF
Sbjct: 140 EPGRDIKTWDDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIF 199

Query: 181 LKGRWVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQ 238
           LKG+WVS  AV+++ LPF+++F +G+AL  +TFLT+L FFT FLVGWF+LGTY FK+L+Q
Sbjct: 200 LKGQWVSTAAVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQ 259

[Close]

BLAST of CSPI04G05240.1 vs. NCBI nr
Match: gi|657948446|ref|XP_008337795.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica])

HSP 1 Score: 343.2 bits (879), Expect = 3.6e-91
Identity = 160/232 (68.97%), Postives = 198/232 (85.34%), Query Frame = 1


Query: 10  LEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRED 69
           L ME+S  PE+ L I+G+ +  ++IDP+R+RFPCCIVWTPLPVISWLVPF+GHIGI RED
Sbjct: 28  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 87

Query: 70  GVILDFAGPNFVCVDNFTFGAVARYLQINRDKC----SISAHRSEEELREVDHSREISTW 129
           GVILDFAGPNFVCVDNF+FGA  RY+QIN++KC     +S ++SE++  E +  R+I TW
Sbjct: 88  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 147

Query: 130 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 189
           DDAL++ TQEFQHRAYNL TCNCHSFVANNLNRLGFR+GGWNVVNLAALIFLKG+WVS  
Sbjct: 148 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 207

Query: 190 AVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           AV+++ LPF+++F +G+AL  +TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 208 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 259

[Close]

BLAST of CSPI04G05240.1 vs. NCBI nr
Match: gi|976917406|gb|KVI02869.1| (Protein of unknown function DUF778 [Cynara cardunculus var. scolymus])

HSP 1 Score: 342.4 bits (877), Expect = 6.2e-91
Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 1


Query: 12  MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 71
           MES  +P + +MIE  + QNM+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 72  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCSISAH-----RSEEELREVDHSREISTWD 131
           ILDFAGPNFVCVDNFTFGAVARY+QI+++KCSI+ H     RSEEE R V+  R   TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 132 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 191
           DAL++STQE+QHR YN+LTCNCHSFVA+NLNRL F+ GGWNVVN+AALI LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 192 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 238
           +IR ++PFV++F +G+  G   FLTFLAFF   LVGWFILGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

The following BLAST results are available for this feature:

BLAST of CSPI04G05240.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTH_ARATH	8.7e-77	60.34	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1	[more]
RTE1_ARATH	5.3e-58	52.86	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 ...	[more]
TM222_HUMAN	2.5e-31	40.12	Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2	[more]
TM222_MOUSE	5.5e-31	39.53	Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1	[more]

BLAST of CSPI04G05240.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7_CUCSA	1.3e-127	99.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1	[more]
A0A103Y5G2_CYNCS	4.3e-91	69.26	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 ...	[more]
F6GWR6_VITVI	9.7e-91	70.56	C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1	[more]
W9SD51_9ROSA	1.6e-90	71.30	Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1	[more]
M5VRS1_PRUPE	8.2e-90	68.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010911mg PE=4 SV=1	[more]

BLAST of CSPI04G05240.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51040.1	4.9e-78	60.34	RTE1-homolog	[more]
AT2G26070.1	3.0e-59	52.86	Protein of unknown function (DUF778)	[more]

BLAST of CSPI04G05240.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457506\|ref\|XP_004146489.1\|	1.9e-127	99.57	PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus]	[more]
gi\|659102422\|ref\|XP_008452120.1\|	3.0e-125	97.83	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo]	[more]
gi\|657948444\|ref\|XP_008337789.1\|	3.6e-91	66.80	PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica]	[more]
gi\|657948446\|ref\|XP_008337795.1\|	3.6e-91	68.97	PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica]	[more]
gi\|976917406\|gb\|KVI02869.1\|	6.2e-91	69.26	Protein of unknown function DUF778 [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008496	DUF778

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI04G05240	CSPI04G05240	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI04G05240.1	CSPI04G05240.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G05240.1.utr5p1	CSPI04G05240.1.utr5p1	five_prime_UTR
CSPI04G05240.1.utr5p2	CSPI04G05240.1.utr5p2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G05240.1.cds2	CSPI04G05240.1.cds2	CDS
CSPI04G05240.1.cds3	CSPI04G05240.1.cds3	CDS
CSPI04G05240.1.cds4	CSPI04G05240.1.cds4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G05240.1.utr3p1	CSPI04G05240.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	Protein of unknown function DUF778	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 17..220 score: 8.3E
IPR008496	Protein of unknown function DUF778	PFAM	PF05608	DUF778	coord: 107..181 score: 3.1E-19coord: 50..108 score: 2.1
None	No IPR available	unknown	Coil	Coil	coord: 234..237 scor
None	No IPR available	PANTHER	PTHR20921:SF1	PROTEIN RTE1-HOMOLOG	coord: 17..220 score: 8.3E