CSPI04G00580.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGTCGTCGACTCCCTGGGTTCCTCGCTTTTCGCTATCCTTCGTCTTAACCTGGTAAGATTTGGCTAGTTTGGTTAAAATTCTTGGTTGGTCTTGGACACCCATGGTTTGGGTTTAAAATCGTTCTTCTTTTGGCATTGGAAGGTTGAATTATAGCTTTTGGAAGGAAGTAAGCGGCTGTCCAGCGGGTTTAGTGTTGTTGAGCGACTATTGGGTAAGCTTTATGGAGTTACGAGATGAATTTTGGATTAGTAGTCTTTTGGTAAAGACTAGTATTAAATTGTGTTATGCTTAGGTTGGATCTTGATTAATTGCTTGGATTAAAATTTGTGATCAAATTTGAGGTAAGTAAGTCTATTACTGGAACCGCTTTGAGCTAAGCAACATAGACCGTATGAATAGTGTTTAATATTGTTTGGGTGTTACTGAGAAGCACGATATGTTAGTACATAGAGAAGTATGTTATCTTCTGATATGTTTTTGTAAATTGAGAAGCCCGATATATTATGATTTATTGTTTGTGGCACTAAAAATACATATGTGTGAGCAACTAAGAAATCCTAATCTAGACAACATAAAATTGCAATGAAGAACGACTATAAACAATAATAATATAATATTATAACAGAAAACTCCACAATCTTTGATTTTGCAGATAAAGGAAGAATGAGAATTGTAGGTCTGACAGGTGGGATTTCATCGGGGAAGAGCACTGTGTCCAACCTCTTCAAGGCCCATGACATTCCTATAGTTGATGCTGACCTCATAGCTCGTGTATGTTCGTCTCCTTCTTTCATGTGTAATATACAACAAAATGGAAAGGATTTCTGGATTTCACCATTCTTTATACCCTCATTGCTAATGTAAGTCAGCAATATAATAGATATTGAATGAATTTGAAATTAATGATGCCAGGGGTAGTGGAACTAATTAGAATGTTACTAATGTATTGTGCCTTCACAATTTTTTGATAGTTACTATAGCCTGCTTTTTACTATTTGAACGTTTGCAGGATGTGGTTGAGAAAGGAACTGGTGGCTGGAAAAAGGTTGTTTCAGCTTTCGGGGAGGACATTTTACTATCTAATGGTGAAATTGATAGGCGAAAACTGGGCCAAATTGTTTTTGCTGATCCTGCAAAGCGGAAACTTTTAAATCAGTAAGAAAAGCTAGCTTTAGATTTCTAGCCATTATTATTTTTTTGTTTGTTTCTCTACTTCTTCTTAGAGACGTGTTGAACTTTACGGTTTTGTTATTCTTTCCCTTCCTGTCTTGTTATCCTTTCCTTTTATGTCTTACTTGCATTATCCTTGTGGTGTTGATTTCCATTCAATACATTATAGCTCAGTGCTGTCTCTGTTTCTCTATTATTGTTAGGATGTGCTGATTTTCAGGAGAAGAATCCTAACAGTATACTCATAGTTTGATGCAAACATAAAAAAATCTTGGACATTGGTGCAGAGGACTGATCACTCCATGCATTTCTTTTTGGATTAAGATTACTTGTATTTCTCTTTAATTTTGATTGACAACACACACGCACACACTTATGTGTGCACACCTAGAAATGACCTAGAAGCCATGAGACAGTCAATCTAAATTGATGAGAAACATAGGAATATGCCAAATTTTTTTTGAAGATCAGCACTTAAATTCATGTATGCATTTGTCTCCTTGGTACATTATGTGCAGTTCAAATACTATATACCTGATCATCTTTTTATGCATTGTCCTTTGCATCTCAATTCTGGTTCACTTTTTTGGATGTTTTTGGTTGGTTTGTGTTATTTCGTACTTCTACTATGACCTCCTTCCTTCTGTTTTGGTGGGACACCCCTTCCAGTTTGAAGAAGTCTCTTTTGTGGGCTCCTGTTGGTGCCTTCTTCTGGCATCTTTTGGAAGAATGAAACAACAGCATTTACAGGGATGCATTCTCTTCTTTTGAGTGTTATATGGATAGGGTTCTTTAATATTTCTACTATTTCTTTCGGTGTAAAAGATGAACACCCTTTTGCACTTCATATCCTATCTTTTAAATTTTCAGTTAACCTTTTCTTTCTTGTAACTCATCGATTAGGTAATCGGAGTTTTTTTTGTCCTTTCTTCATTGATCAATGCAATTGTTTCTTCTATAGAAAAAACGATCAATATATAGGTTTGGTATATGGATATATTATGCTCATGACCTTAACTGTTTAATTTGAAGAACACTGAATAATGATTGATTATTGGCATACTAATTTGAATCAATTGTCTTATAGATTATTAGCTCCATACATATCCTCTGGAATCTTATGGAAGATAGTGAAGTTATGGATGAAAGGTTACAAGGTTATAGTGCTTGATATCCCTTTACTATTTGAAGCCAAGATGGACAGATGGACAAAACCAACAATTGTTGTATGGGTGGATTCTGAAACACAGCTTCAACGACTTGTTGCTAGAGATGGACAAAGTGAAGACGATGCTCGGAACAGAATAAATGCTCAAATGGCATTGGATCTTAAAAGGGATAAAGCAGACATTGTAATCGACAACACTGGATCTCTCGATGACTTGAACCAACGGTTTCGGGAAGTGTTATCCGAGGTGACAAAACCCTTGTCCTGGACCGAGTTTATGCTTTCCAGACAAGGAGCATTGACAACTCTGGTGGTTGTCATCATCAGTGCTATCACTTGCAGAAAATTTTACAACAGTGGAGTTTAG ATGGTCGTCGTCGACTCCCTGGGTTCCTCGCTTTTCGCTATCCTTCGTCTTAACCTGCTTTTGGAAGGAAGTAAGCGGCTGTCCAGCGGGTTTAGTGTTGTTGAGCGACTATTGGATAAAGGAAGAATGAGAATTGTAGGTCTGACAGGTGGGATTTCATCGGGGAAGAGCACTGTGTCCAACCTCTTCAAGGCCCATGACATTCCTATAGTTGATGCTGACCTCATAGCTCGTGATGTGGTTGAGAAAGGAACTGGTGGCTGGAAAAAGGTTGTTTCAGCTTTCGGGGAGGACATTTTACTATCTAATGGTGAAATTGATAGGCGAAAACTGGGCCAAATTGTTTTTGCTGATCCTGCAAAGCGGAAACTTTTAAATCAATTATTAGCTCCATACATATCCTCTGGAATCTTATGGAAGATAGTGAAGTTATGGATGAAAGGTTACAAGGTTATAGTGCTTGATATCCCTTTACTATTTGAAGCCAAGATGGACAGATGGACAAAACCAACAATTGTTGTATGGGTGGATTCTGAAACACAGCTTCAACGACTTGTTGCTAGAGATGGACAAAGTGAAGACGATGCTCGGAACAGAATAAATGCTCAAATGGCATTGGATCTTAAAAGGGATAAAGCAGACATTGTAATCGACAACACTGGATCTCTCGATGACTTGAACCAACGGTTTCGGGAAGTGTTATCCGAGGTGACAAAACCCTTGTCCTGGACCGAGTTTATGCTTTCCAGACAAGGAGCATTGACAACTCTGGTGGTTGTCATCATCAGTGCTATCACTTGCAGAAAATTTTACAACAGTGGAGTTTAG ATGGTCGTCGTCGACTCCCTGGGTTCCTCGCTTTTCGCTATCCTTCGTCTTAACCTGCTTTTGGAAGGAAGTAAGCGGCTGTCCAGCGGGTTTAGTGTTGTTGAGCGACTATTGGATAAAGGAAGAATGAGAATTGTAGGTCTGACAGGTGGGATTTCATCGGGGAAGAGCACTGTGTCCAACCTCTTCAAGGCCCATGACATTCCTATAGTTGATGCTGACCTCATAGCTCGTGATGTGGTTGAGAAAGGAACTGGTGGCTGGAAAAAGGTTGTTTCAGCTTTCGGGGAGGACATTTTACTATCTAATGGTGAAATTGATAGGCGAAAACTGGGCCAAATTGTTTTTGCTGATCCTGCAAAGCGGAAACTTTTAAATCAATTATTAGCTCCATACATATCCTCTGGAATCTTATGGAAGATAGTGAAGTTATGGATGAAAGGTTACAAGGTTATAGTGCTTGATATCCCTTTACTATTTGAAGCCAAGATGGACAGATGGACAAAACCAACAATTGTTGTATGGGTGGATTCTGAAACACAGCTTCAACGACTTGTTGCTAGAGATGGACAAAGTGAAGACGATGCTCGGAACAGAATAAATGCTCAAATGGCATTGGATCTTAAAAGGGATAAAGCAGACATTGTAATCGACAACACTGGATCTCTCGATGACTTGAACCAACGGTTTCGGGAAGTGTTATCCGAGGTGACAAAACCCTTGTCCTGGACCGAGTTTATGCTTTCCAGACAAGGAGCATTGACAACTCTGGTGGTTGTCATCATCAGTGCTATCACTTGCAGAAAATTTTACAACAGTGGAGTTTAG
BLAST of CSPI04G00580.1 vs. Swiss-Prot
Match: COAE_ARATH (Dephospho-CoA kinase OS=Arabidopsis thaliana GN=COAE PE=2 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 3.1e-86 Identity = 154/227 (67.84%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. Swiss-Prot
Match: COAE_ORYSJ (Dephospho-CoA kinase OS=Oryza sativa subsp. japonica GN=Os01g0360600 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.2e-84 Identity = 147/227 (64.76%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. Swiss-Prot
Match: DCAKD_DANRE (Dephospho-CoA kinase domain-containing protein OS=Danio rerio GN=dcakd PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.1e-44 Identity = 98/216 (45.37%), Postives = 146/216 (67.59%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. Swiss-Prot
Match: COAE_BACLD (Dephospho-CoA kinase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=coaE PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 9.5e-43 Identity = 88/190 (46.32%), Postives = 133/190 (70.00%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. Swiss-Prot
Match: YNP5_CAEEL (Uncharacterized protein T05G5.5 OS=Caenorhabditis elegans GN=T05G5.5 PE=3 SV=2) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42 Identity = 88/207 (42.51%), Postives = 139/207 (67.15%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TrEMBL
Match: A0A0A0KV42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001520 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 5.1e-136 Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TrEMBL
Match: D7U254_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00040 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 4.2e-98 Identity = 175/233 (75.11%), Postives = 208/233 (89.27%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TrEMBL
Match: M5VMN9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010823mg PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95 Identity = 173/231 (74.89%), Postives = 205/231 (88.74%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TrEMBL
Match: A5C4Z5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013038 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95 Identity = 172/233 (73.82%), Postives = 205/233 (87.98%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TrEMBL
Match: A0A059A867_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03458 PE=3 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 5.4e-93 Identity = 170/227 (74.89%), Postives = 204/227 (89.87%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. TAIR10
Match: AT2G27490.1 (AT2G27490.1 dephospho-CoA kinase family) HSP 1 Score: 319.7 bits (818), Expect = 1.8e-87 Identity = 154/227 (67.84%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. NCBI nr
Match: gi|700197626|gb|KGN52784.1| (hypothetical protein Csa_4G001520 [Cucumis sativus]) HSP 1 Score: 491.9 bits (1265), Expect = 7.4e-136 Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. NCBI nr
Match: gi|778689230|ref|XP_011652920.1| (PREDICTED: dephospho-CoA kinase [Cucumis sativus]) HSP 1 Score: 454.9 bits (1169), Expect = 1.0e-124 Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. NCBI nr
Match: gi|659108756|ref|XP_008454373.1| (PREDICTED: dephospho-CoA kinase domain-containing protein [Cucumis melo]) HSP 1 Score: 444.5 bits (1142), Expect = 1.3e-121 Identity = 225/233 (96.57%), Postives = 229/233 (98.28%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. NCBI nr
Match: gi|225437290|ref|XP_002262984.1| (PREDICTED: dephospho-CoA kinase [Vitis vinifera]) HSP 1 Score: 365.9 bits (938), Expect = 6.1e-98 Identity = 175/233 (75.11%), Postives = 208/233 (89.27%), Query Frame = 1
BLAST of CSPI04G00580.1 vs. NCBI nr
Match: gi|1009148386|ref|XP_015891910.1| (PREDICTED: dephospho-CoA kinase isoform X2 [Ziziphus jujuba]) HSP 1 Score: 362.1 bits (928), Expect = 8.8e-97 Identity = 177/241 (73.44%), Postives = 212/241 (87.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
|