CSPI03G29220.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G29220.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	GDSL esterase/lipase
Location	Chr3 : 26845923 .. 26846168 (-)
Sequence length	246

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTAGGGTTGGAGAATGATCCATTGATGGCATGTTGTGGATATGGAGGGGCACCAAACAATTACAATGTAAAAGCAACATGTGGGCAACCAGGATATTCAATTTGTTCAAATCCTTCTAAATCAATCATATGGGATGGTGTTCATTACACTGAAGCTGCTAATCATCTTGTGGCTTCTTCCATCTTTTCTTCCCATTTCTCTACTCCTAACCTATCACTTCACCAACTTTCCCATCTTTAA

mRNA sequence

ATGAAATTAGGGTTGGAGAATGATCCATTGATGGCATGTTGTGGATATGGAGGGGCACCAAACAATTACAATGTAAAAGCAACATGTGGGCAACCAGGATATTCAATTTGTTCAAATCCTTCTAAATCAATCATATGGGATGGTGTTCATTACACTGAAGCTGCTAATCATCTTGTGGCTTCTTCCATCTTTTCTTCCCATTTCTCTACTCCTAACCTATCACTTCACCAACTTTCCCATCTTTAA

Coding sequence (CDS)

ATGAAATTAGGGTTGGAGAATGATCCATTGATGGCATGTTGTGGATATGGAGGGGCACCAAACAATTACAATGTAAAAGCAACATGTGGGCAACCAGGATATTCAATTTGTTCAAATCCTTCTAAATCAATCATATGGGATGGTGTTCATTACACTGAAGCTGCTAATCATCTTGTGGCTTCTTCCATCTTTTCTTCCCATTTCTCTACTCCTAACCTATCACTTCACCAACTTTCCCATCTTTAA

Homology

[Close]

BLAST of CSPI03G29220.1 vs. Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-21
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 1


Query: 8   DPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSH 67
           DPLMACCGYGG PNNY+ KATCGQPG +IC + +K+I+WDGVHYTEAAN  V  ++ ++ 
Sbjct: 294 DPLMACCGYGGRPNNYDRKATCGQPGSTICRDVTKAIVWDGVHYTEAANRFVVDAVLTNR 353

Query: 68  FSTPNLSL 76
           +S P  SL
Sbjct: 354 YSYPKNSL 361

[Close]

BLAST of CSPI03G29220.1 vs. Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 9   PLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSHF 68
           PLMACCGYGG P NYNVK TCG  G ++C   S+ I WDG+HYTE AN +VA  + S H+
Sbjct: 301 PLMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETANAIVAMKVLSMHY 360

Query: 69  STPNLSLH 77
           S P    H
Sbjct: 361 SKPPTPFH 368

[Close]

BLAST of CSPI03G29220.1 vs. Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-16
Identity = 38/68 (55.88%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 9   PLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSHF 68
           PLMACCGYGG P NYNV  TCG  G   C   S+ I WDG+HYTE AN +VA  + S   
Sbjct: 298 PLMACCGYGGPPYNYNVNITCGNGGSKSCDEGSRFISWDGIHYTETANAIVAMKVLSMQH 357

Query: 69  STPNLSLH 77
           STP    H
Sbjct: 358 STPPTPFH 365

[Close]

BLAST of CSPI03G29220.1 vs. Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.2e-14
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 3   LGLENDPLMACCGYGGAPNNYNVKATCGQP----GYSI----CSNPSKSIIWDGVHYTEA 62
           LG E  PLMACCG GGAP NY+ + TCGQ     G S+    C++ S+ I WDG+HYTEA
Sbjct: 319 LGFEK-PLMACCGVGGAPLNYDSRITCGQTKVLDGISVTAKACNDSSEYINWDGIHYTEA 378

Query: 63  ANHLVASSIFSSHFSTPNLS 75
           AN  V+S I +  +S P  S
Sbjct: 379 ANEFVSSQILTGKYSDPPFS 397

[Close]

BLAST of CSPI03G29220.1 vs. Swiss-Prot
Match: GDL7_ARATH (GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 34/70 (48.57%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G  N PL ACCG GG P NY V   CG      C +PSK + WDGVH TEAA  L+A 
Sbjct: 303 KFGFMNRPLSACCGAGG-PYNYTVGRKCGTDIVESCDDPSKYVAWDGVHMTEAAYRLMAE 362

Query: 62  SIFSSHFSTP 72
            I +  ++ P
Sbjct: 363 GILNGPYAIP 371

[Close]

BLAST of CSPI03G29220.1 vs. TrEMBL
Match: A5AD17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025409 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPGYSIC N S SI+WDGVHYTEAAN +  +
Sbjct: 282 KYGFEA-PFMACCGYGGPPNNYDRKATCGQPGYSICKNASSSIVWDGVHYTEAANQVSTA 341

Query: 62  SIFSSHFSTPNLSLHQL 79
           SI S H+STP + L QL
Sbjct: 342 SILSGHYSTPRVKLDQL 357

[Close]

BLAST of CSPI03G29220.1 vs. TrEMBL
Match: D7U2N6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02050 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPGYSIC N S SI+WDGVHYTEAAN +  +
Sbjct: 288 KYGFEA-PFMACCGYGGPPNNYDRKATCGQPGYSICKNASSSIVWDGVHYTEAANQVSTA 347

Query: 62  SIFSSHFSTPNLSLHQL 79
           SI S H+STP + L QL
Sbjct: 348 SILSGHYSTPRVKLDQL 363

[Close]

BLAST of CSPI03G29220.1 vs. TrEMBL
Match: A0A061DSI4_THECC (GDSL-like Lipase/Acylhydrolase superfamily protein OS=Theobroma cacao GN=TCM_004890 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-22
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPG SIC+N S+SI+WDGVHY+EA+N +VA+
Sbjct: 289 KYGFEY-PFMACCGYGGPPNNYDQKATCGQPGSSICNNVSRSIVWDGVHYSEASNRVVAT 348

Query: 62  SIFSSHFSTPNLSL 76
           SI S H+STP + L
Sbjct: 349 SILSGHYSTPQMKL 361

[Close]

BLAST of CSPI03G29220.1 vs. TrEMBL
Match: A0A0D2PC15_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G146200 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-21
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E DP MACCGYGG PNNY+ KATCGQPG +IC+N S+SI+WDGVHYTEA+N +VA+
Sbjct: 288 KYGFE-DPFMACCGYGGPPNNYSQKATCGQPGSTICNNVSRSIVWDGVHYTEASNRVVAT 347

Query: 62  SIFSSHFSTPNLSL 76
           +I S  +S P + L
Sbjct: 348 TILSGRYSKPQMQL 360

[Close]

BLAST of CSPI03G29220.1 vs. TrEMBL
Match: R0HND2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018750mg PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-20
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 8   DPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSH 67
           DPLMACCGYGG PNNY+ KATCGQPG +IC + +K+I+WDGVHYTEAAN  V  ++F++ 
Sbjct: 294 DPLMACCGYGGRPNNYDRKATCGQPGSTICPDVTKAIVWDGVHYTEAANRFVVDAVFTNR 353

Query: 68  FSTPNLSL 76
           +S P +SL
Sbjct: 354 YSYPKISL 361

[Close]

BLAST of CSPI03G29220.1 vs. TAIR10
Match: AT3G62280.1 (AT3G62280.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-22
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 1


Query: 8   DPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSH 67
           DPLMACCGYGG PNNY+ KATCGQPG +IC + +K+I+WDGVHYTEAAN  V  ++ ++ 
Sbjct: 294 DPLMACCGYGGRPNNYDRKATCGQPGSTICRDVTKAIVWDGVHYTEAANRFVVDAVLTNR 353

Query: 68  FSTPNLSL 76
           +S P  SL
Sbjct: 354 YSYPKNSL 361

[Close]

BLAST of CSPI03G29220.1 vs. TAIR10
Match: AT1G56670.1 (AT1G56670.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 8.0e-20
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 9   PLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSHF 68
           PLMACCGYGG P NYNVK TCG  G ++C   S+ I WDG+HYTE AN +VA  + S H+
Sbjct: 301 PLMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETANAIVAMKVLSMHY 360

Query: 69  STPNLSLH 77
           S P    H
Sbjct: 361 SKPPTPFH 368

[Close]

BLAST of CSPI03G29220.1 vs. TAIR10
Match: AT1G09390.1 (AT1G09390.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-17
Identity = 38/68 (55.88%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 9   PLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVASSIFSSHF 68
           PLMACCGYGG P NYNV  TCG  G   C   S+ I WDG+HYTE AN +VA  + S   
Sbjct: 298 PLMACCGYGGPPYNYNVNITCGNGGSKSCDEGSRFISWDGIHYTETANAIVAMKVLSMQH 357

Query: 69  STPNLSLH 77
           STP    H
Sbjct: 358 STPPTPFH 365

[Close]

BLAST of CSPI03G29220.1 vs. TAIR10
Match: AT1G54790.2 (AT1G54790.2 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 3.5e-15
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 3   LGLENDPLMACCGYGGAPNNYNVKATCGQP----GYSI----CSNPSKSIIWDGVHYTEA 62
           LG E  PLMACCG GGAP NY+ + TCGQ     G S+    C++ S+ I WDG+HYTEA
Sbjct: 319 LGFEK-PLMACCGVGGAPLNYDSRITCGQTKVLDGISVTAKACNDSSEYINWDGIHYTEA 378

Query: 63  ANHLVASSIFSSHFSTPNLS 75
           AN  V+S I +  +S P  S
Sbjct: 379 ANEFVSSQILTGKYSDPPFS 397

[Close]

BLAST of CSPI03G29220.1 vs. TAIR10
Match: AT1G28580.1 (AT1G28580.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 7.2e-13
Identity = 34/70 (48.57%), Postives = 40/70 (57.14%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G  N PL ACCG GG P NY V   CG      C +PSK + WDGVH TEAA  L+A 
Sbjct: 303 KFGFMNRPLSACCGAGG-PYNYTVGRKCGTDIVESCDDPSKYVAWDGVHMTEAAYRLMAE 362

Query: 62  SIFSSHFSTP 72
            I +  ++ P
Sbjct: 363 GILNGPYAIP 371

[Close]

BLAST of CSPI03G29220.1 vs. NCBI nr
Match: gi|147786947|emb|CAN71136.1| (hypothetical protein VITISV_025409 [Vitis vinifera])

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-23
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPGYSIC N S SI+WDGVHYTEAAN +  +
Sbjct: 282 KYGFEA-PFMACCGYGGPPNNYDRKATCGQPGYSICKNASSSIVWDGVHYTEAANQVSTA 341

Query: 62  SIFSSHFSTPNLSLHQL 79
           SI S H+STP + L QL
Sbjct: 342 SILSGHYSTPRVKLDQL 357

[Close]

BLAST of CSPI03G29220.1 vs. NCBI nr
Match: gi|359480202|ref|XP_002272542.2| (PREDICTED: GDSL esterase/lipase At3g62280 [Vitis vinifera])

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-23
Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPGYSIC N S SI+WDGVHYTEAAN +  +
Sbjct: 288 KYGFEA-PFMACCGYGGPPNNYDRKATCGQPGYSICKNASSSIVWDGVHYTEAANQVSTA 347

Query: 62  SIFSSHFSTPNLSLHQL 79
           SI S H+STP + L QL
Sbjct: 348 SILSGHYSTPRVKLDQL 363

[Close]

BLAST of CSPI03G29220.1 vs. NCBI nr
Match: gi|590720035|ref|XP_007051220.1| (GDSL-like Lipase/Acylhydrolase superfamily protein [Theobroma cacao])

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-22
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E  P MACCGYGG PNNY+ KATCGQPG SIC+N S+SI+WDGVHY+EA+N +VA+
Sbjct: 289 KYGFEY-PFMACCGYGGPPNNYDQKATCGQPGSSICNNVSRSIVWDGVHYSEASNRVVAT 348

Query: 62  SIFSSHFSTPNLSL 76
           SI S H+STP + L
Sbjct: 349 SILSGHYSTPQMKL 361

[Close]

BLAST of CSPI03G29220.1 vs. NCBI nr
Match: gi|823150396|ref|XP_012475016.1| (PREDICTED: GDSL esterase/lipase At3g62280 [Gossypium raimondii])

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-21
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E DP MACCGYGG PNNY+ KATCGQPG +IC+N S+SI+WDGVHYTEA+N +VA+
Sbjct: 288 KYGFE-DPFMACCGYGGPPNNYSQKATCGQPGSTICNNVSRSIVWDGVHYTEASNRVVAT 347

Query: 62  SIFSSHFSTPNLSL 76
           +I S  +S P + L
Sbjct: 348 TILSGRYSKPQMQL 360

[Close]

BLAST of CSPI03G29220.1 vs. NCBI nr
Match: gi|729425805|ref|XP_010559175.1| (PREDICTED: GDSL esterase/lipase At3g62280-like [Tarenaya hassleriana])

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 1


Query: 2   KLGLENDPLMACCGYGGAPNNYNVKATCGQPGYSICSNPSKSIIWDGVHYTEAANHLVAS 61
           K G E DP MACCGYGG PNNY+ +ATCGQPG +IC + +KSI+WDGVHY++AAN  VAS
Sbjct: 288 KYGFE-DPFMACCGYGGRPNNYDRRATCGQPGSTICRDVTKSIVWDGVHYSDAANRAVAS 347

Query: 62  SIFSSHFSTPNLSL 76
           ++ S+ +STP++ L
Sbjct: 348 AVLSNRYSTPHIPL 360

The following BLAST results are available for this feature:

BLAST of CSPI03G29220.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GDL60_ARATH	3.0e-21	63.24	GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1	[more]
LIP4_ARATH	1.4e-18	57.35	GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1	[more]
GDL2_ARATH	2.3e-16	55.88	GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1	[more]
GDL22_ARATH	6.2e-14	51.25	GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1	[more]
GDL7_ARATH	1.3e-11	48.57	GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1	[more]

BLAST of CSPI03G29220.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A5AD17_VITVI	1.7e-23	68.83	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025409 PE=4 SV=1	[more]
D7U2N6_VITVI	1.7e-23	68.83	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02050 PE=4 SV=...	[more]
A0A061DSI4_THECC	2.5e-22	67.57	GDSL-like Lipase/Acylhydrolase superfamily protein OS=Theobroma cacao GN=TCM_004...	[more]
A0A0D2PC15_GOSRA	1.6e-21	64.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G146200 PE=4 SV=1	[more]
R0HND2_9BRAS	1.8e-20	64.71	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018750mg PE=4 SV=1	[more]

BLAST of CSPI03G29220.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62280.1	1.7e-22	63.24	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G56670.1	8.0e-20	57.35	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G09390.1	1.3e-17	55.88	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G54790.2	3.5e-15	51.25	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G28580.1	7.2e-13	48.57	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

BLAST of CSPI03G29220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147786947\|emb\|CAN71136.1\|	2.5e-23	68.83	hypothetical protein VITISV_025409 [Vitis vinifera]	[more]
gi\|359480202\|ref\|XP_002272542.2\|	2.5e-23	68.83	PREDICTED: GDSL esterase/lipase At3g62280 [Vitis vinifera]	[more]
gi\|590720035\|ref\|XP_007051220.1\|	3.6e-22	67.57	GDSL-like Lipase/Acylhydrolase superfamily protein [Theobroma cacao]	[more]
gi\|823150396\|ref\|XP_012475016.1\|	2.3e-21	64.86	PREDICTED: GDSL esterase/lipase At3g62280 [Gossypium raimondii]	[more]
gi\|729425805\|ref\|XP_010559175.1\|	2.0e-20	62.16	PREDICTED: GDSL esterase/lipase At3g62280-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G29220	CSPI03G29220	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G29220.1	CSPI03G29220.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G29220.1.cds1	CSPI03G29220.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 78..81 scor
None	No IPR available	PANTHER	PTHR22835	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	coord: 7..78 score: 2.7
None	No IPR available	PANTHER	PTHR22835:SF137	SUBFAMILY NOT NAMED	coord: 7..78 score: 2.7