CSPI03G25980.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G25980.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat-containing family protein
Location	Chr3 : 23287983 .. 23290870 (+)
Sequence length	2148

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACCCATTTGGCAAATCCACTCTCATATTAATTTCTTTCTCTTCAATCCTCTCATTTCCAGTTCAAAAATGGAGCACATTTACTGCCACTCCTCTCTGTAAGGTAATTCTGTTCTTCATTTCTCTTTTCAACTTCTTCGGATTGTGATGGGAAGTCATCCATAAGGACTCTGGAATTCATTGCCATTTGAATTCTGGGATTATCTTATCTTTTCTCCTTCATTTCTATTGACGATGCATGCTCTTAGTAATTGGTGTCCAACTAGTTGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGGGTAAAGAGTTTTGGTTTTTCTGATTGTCGTTGTGGAAATTGGGGTTTCTCTTTGATTTCCTTTAACTTGAGTGTTTTGAGAAGTGGCTTTTGCTACGAGAATTCGAGATTTGTGTGTAATTGTGAGTTCCGCCATGGCTGTTCTAAGCTTAGAGTTGTTCCATTAATGAAGACGAACAGGAATTCTCTTGGGGCTTTCTGTTTATCTGCTTGGGCTGTTGAACAACCAACAATTGATGATGAAATCACTAGGGTTGAATCAAATTCTAGAGATGGTTTGCCTGAGAGAGGATTAGATTGGGATGATGATGACGACGGCAAAGTTAATGGTGAAAATAGCCATGGAGGAGGGAGCTTTAAAGATGAAGGAGAATTGGAGGGGGTGGGAGATGTTAGGGTTGATGTTCGTGCACTAGCGGCTCAGTTGCAGCTTGCTCGTACGGCAGATGATGTTGACCAGGTTCTCAAGGACATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAGGTTAAAAAGAAGACTTCAAAGAATGTTTGTAAAGCTGCAGATGTTCCTAGAAAAAGCAGGAACAATTTGAAAGAAGGAAGCTAGTGGTTGATGATCCCTCCATCAGTACTCTGATCTCTTGATTTGTGCATAAAGTATTTGAAGCGACTCAGGAGGAAGCCTATGACTTCTGATTACCCGATCCGAGTGCATATGGAGCTCAGAAACTAAAAAGTCAATTGAAAGTGATGTGGCTGATCAAGGTGAAACTCCTGGGAAATCTGCAGTATCCAGTAAGATACTTTTCTCTGATATGTATGGGAGTTTCACGGTAAAGAAAAGTTAAAACACAATCTGTGATGTAGAAAGCCAAAGTAATGAAAGCATATGAGAATTTGTAGCTTTTTCCTTTTTATCTATAAAATGGTGTAAAGATGAAAGGTCTCTTGATCTAATCCCTTTGCAATGGAAACTTTTAATAAATGAGTTTTGAGTATTTAACTGTGTAATCCCTTTTGAGCAGC

mRNA sequence

ATGCATGCTCTTAGTAATTGGTGTCCAACTAGTTGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGGGTAAAGAGTTTTGGTTTTTCTGATTGTCGTTGTGGAAATTGGGGTTTCTCTTTGATTTCCTTTAACTTGAGTGTTTTGAGAAGTGGCTTTTGCTACGAGAATTCGAGATTTGTGTGTAATTGTGAGTTCCGCCATGGCTGTTCTAAGCTTAGAGTTGTTCCATTAATGAAGACGAACAGGAATTCTCTTGGGGCTTTCTGTTTATCTGCTTGGGCTGTTGAACAACCAACAATTGATGATGAAATCACTAGGGTTGAATCAAATTCTAGAGATGGTTTGCCTGAGAGAGGATTAGATTGGGATGATGATGACGACGGCAAAGTTAATGGTGAAAATAGCCATGGAGGAGGGAGCTTTAAAGATGAAGGAGAATTGGAGGGGGTGGGAGATGTTAGGGTTGATGTTCGTGCACTAGCGGCTCAGTTGCAGCTTGCTCGTACGGCAGATGATGTTGACCAGGTTCTCAAGGACATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAG

Coding sequence (CDS)

ATGCATGCTCTTAGTAATTGGTGTCCAACTAGTTGCTCCGGCGTTGAATTAGGTTCTTATTCTGTAGTTCATAGGTCATGGAAAAGGGTAAAGAGTTTTGGTTTTTCTGATTGTCGTTGTGGAAATTGGGGTTTCTCTTTGATTTCCTTTAACTTGAGTGTTTTGAGAAGTGGCTTTTGCTACGAGAATTCGAGATTTGTGTGTAATTGTGAGTTCCGCCATGGCTGTTCTAAGCTTAGAGTTGTTCCATTAATGAAGACGAACAGGAATTCTCTTGGGGCTTTCTGTTTATCTGCTTGGGCTGTTGAACAACCAACAATTGATGATGAAATCACTAGGGTTGAATCAAATTCTAGAGATGGTTTGCCTGAGAGAGGATTAGATTGGGATGATGATGACGACGGCAAAGTTAATGGTGAAAATAGCCATGGAGGAGGGAGCTTTAAAGATGAAGGAGAATTGGAGGGGGTGGGAGATGTTAGGGTTGATGTTCGTGCACTAGCGGCTCAGTTGCAGCTTGCTCGTACGGCAGATGATGTTGACCAGGTTCTCAAGGACATGGTTGAATTGCCTCTTCAAGTTTTCTCATCCATGATTAGGGGTTTTGGGAGAGACAGAAGGTTGGAGTGTGCAGTAGCTCTTGTTGACTGGCTTAAGAGAAAGAAGATTGAAACTAATGGTCGTATTGCACCAAACTTGTTCATATACAATAGTCTTCTTGGTGCAGTTAAGCAATCGGGAGAGCTTTCGAGAATGGAAAATGTCTTGACTGATATGGCACAGGAAGGAATTGTTTCAAATGTTGTTACGTACAACACGATTATGTCCATTTACTTGGAACAAGGACTAGCAATGAAAGCTCTTGGCATTCTTGAAGAGATGCCGAAGAAAGGCCTAACTCTGTCTCCCGTATCCTACTCTACGGCCTTACGAGCATACCGAAGGATGAAAGATGGGAATGGTGCTTTAAAGTTCATGGTTGAGTTGAGAGAAAGATATCGTAATGGTGAAATAGCGAAAGATGATAATGTAGATTGGGCTAATGAGTTCTTGAAGCTCGAAAACTTTACAAGACGTGTTTGCTACCAAGTAATGAGGATTTGGCTTGTGAAGGGTGACTGTGCAAGCACGAAGGTGTTGCAACTTCTAATGGAAATGGATAAAGCAGGACTGTCACTTGATCGTGCTGAAGCGGAGCGACTTATTTGGGCTTGTACGTGTGCAGAACACTATAATGTAGCAAAAGAATTGTACTTCAGGATAAGAGAAAAGCAATGTGGTATAAGCTTATCTGTTTGTAATCATGTGATTTGGTTGATGGGGAAAGCTAAGAAATGGTGGGCAGCATTGGAGATTTATGAAGATTTATTAGAGAAAGGACCAAAGCCAAACAACATGTCATATGAACTAATTGTCTCTCACTTCAATGTTCTTCTCACAGCCGCAAAGAAAAGAGGAATTTGGAGATGGGGTGTTCGGTTACTCAACAAAATGGAAGAGAAAGGTCTTAGACCTGGAAGTCGGGAATGGAACGCTGTTCTTGTTGCATGTTCCAGAGCTGCAGAAACTTCTGCAGCTATAGATATTTTTAGGAAAATGGTTGAACAAGGTGAAAAACCCACTGTCCTTTCATATGGGGCATTACTTAGTGCTCTGGAAAAGGGAAAGCTATATGATGAAGCACGCAGTGTCTGGGATCATATGATTAGAGTTGGGGTGGAGCCAAACATCTATGCTTATACGACTATGGCGTCAGTTTTCACTGGTCAAGGAAAATTTAATATGGTTGAAGTCACTATCAATGATATGGTTGCATCAGGCATTGAGCCAACAGTCGTCACATACAATGCAATAATCACGGGATGTGTCCGTAATGGGATGAGCAGTGTAGCTTATGAGTGGTTTCACCGCATGAAAGTTAGAAACATCTCTCCGAACGAGGTGAGTTACGAGTTACTCATTGAGGCCCTTGCAAAGGAAGGTAAACCAAGGCTGGCTTATGAGTTATACATGAGGGCTAAGGATGAGGGTCTCAATCTTTCTTCTAAAGTGTATGATGCAGTAATTGAATCCTCTCAACTTTATGGAGCCTCCGTTAATATAAAATTGTTAGGGTTGCGGCCACCTGACAGGAACAAGAGTTCATAG

Homology

[Close]

BLAST of CSPI03G25980.1 vs. Swiss-Prot
Match: PP264_ARATH (Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana GN=At3g46610 PE=2 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 4.3e-220
Identity = 385/637 (60.44%), Postives = 484/637 (75.98%), Query Frame = 1


Query: 77  SKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDDGK 136
           S  +V+ L +  R+ LG+     WA EQ                    R L+  +++   
Sbjct: 61  SNRKVLFLCEPKRSLLGSSFGVGWATEQ--------------------RELELGEEEVST 120

Query: 137 VNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFS 196
            +  +++GG             ++RVDVR LA  L+ A+TADDVD VLKD  ELPLQVF 
Sbjct: 121 EDLSSANGGEK----------NNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVFC 180

Query: 197 SMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVL 256
           +MI+GFG+D+RL+ AVA+VDWLKRKK E+ G I PNLFIYNSLLGA++  GE    E +L
Sbjct: 181 AMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEA---EKIL 240

Query: 257 TDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRM 316
            DM +EGIV N+VTYNT+M IY+E+G  +KALGIL+   +KG   +P++YSTAL  YRRM
Sbjct: 241 KDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRM 300

Query: 317 KDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCAS 376
           +DG GAL+F VELRE+Y   EI  D   DW  EF+KLENF  R+CYQVMR WLVK D  +
Sbjct: 301 EDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWT 360

Query: 377 TKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHV 436
           T+VL+LL  MD AG+   R E ERLIWACT  EHY V KELY RIRE+   ISLSVCNH+
Sbjct: 361 TRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHL 420

Query: 437 IWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLN 496
           IWLMGKAKKWWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIWRWGVRLLN
Sbjct: 421 IWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLN 480

Query: 497 KMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGK 556
           KME+KGL+P  R WNAVLVACS+A+ET+AAI IF+ MV+ GEKPTV+SYGALLSALEKGK
Sbjct: 481 KMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGK 540

Query: 557 LYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYN 616
           LYDEA  VW+HMI+VG+EPN+YAYTTMASV TGQ KFN+++  + +M + GIEP+VVT+N
Sbjct: 541 LYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFN 600

Query: 617 AIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 676
           A+I+GC RNG+S VAYEWFHRMK  N+ PNE++YE+LIEALA + KPRLAYEL+++A++E
Sbjct: 601 AVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNE 660

Query: 677 GLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNK 714
           GL LSSK YDAV++S++ YGA++++ LLG RP  +N+
Sbjct: 661 GLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664

[Close]

BLAST of CSPI03G25980.1 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-30
Identity = 112/486 (23.05%), Postives = 223/486 (45.88%), Query Frame = 1


Query: 196 SSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENV 255
           +++IRGF R  +   A  +++ L     E +G + P++  YN ++    ++GE++   +V
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSV 200

Query: 256 LTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRR 315
           L  M+   +  +VVTYNTI+    + G   +A+ +L+ M ++      ++Y+  + A  R
Sbjct: 201 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 260

Query: 316 MKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCA 375
                 A+K + E+R+R    ++                     V Y V    LV G C 
Sbjct: 261 DSGVGHAMKLLDEMRDRGCTPDV---------------------VTYNV----LVNGICK 320

Query: 376 STKV---LQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSV 435
             ++   ++ L +M  +G   +      ++ +      +  A++L   +  K    S+  
Sbjct: 321 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 380

Query: 436 CNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGV 495
            N +I  + +      A++I E + + G +PN++SY  ++  F       K++ + R  +
Sbjct: 381 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF------CKEKKMDR-AI 440

Query: 496 RLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSAL 555
             L +M  +G  P    +N +L A  +  +   A++I  ++  +G  P +++Y  ++  L
Sbjct: 441 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 500

Query: 556 EKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTV 615
            K     +A  + D M    ++P+   Y+++    + +GK +      ++    GI P  
Sbjct: 501 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 560

Query: 616 VTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMR 675
           VT+N+I+ G  ++  +  A ++   M  R   PNE SY +LIE LA EG  + A EL   
Sbjct: 561 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 585

Query: 676 AKDEGL 679
             ++GL
Sbjct: 621 LCNKGL 585

[Close]

BLAST of CSPI03G25980.1 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-29
Identity = 112/493 (22.72%), Postives = 222/493 (45.03%), Query Frame = 1


Query: 217 WLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMS 276
           W   ++I  +G +  N++  N ++ A+ + G++ ++   L+ + ++G+  ++VTYNT++S
Sbjct: 220 WGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 279

Query: 277 IYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRA------YRRMKD----------GN 336
            Y  +GL  +A  ++  MP KG +    +Y+T +        Y R K+            
Sbjct: 280 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 339

Query: 337 GALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCY-QVMRIWLVKGDCASTKV 396
            +  +   L E  + G++ + + V   ++    +     VC+  +M ++   G+    K 
Sbjct: 340 DSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNL--DKA 399

Query: 397 LQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWL 456
           L     + +AGL  D      LI         +VA  L   + ++ C + +   N ++  
Sbjct: 400 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 459

Query: 457 MGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKME 516
           + K K    A +++ ++ E+   P+  SY L      +L+    K G  +  + L  KM+
Sbjct: 460 LCKRKMLGEADKLFNEMTERALFPD--SYTL-----TILIDGHCKLGNLQNAMELFQKMK 519

Query: 517 EKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSAL-EKGKLY 576
           EK +R     +N +L    +  +   A +I+  MV +   PT +SY  L++AL  KG L 
Sbjct: 520 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL- 579

Query: 577 DEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAI 636
            EA  VWD MI   ++P +    +M   +   G  +  E  +  M++ G  P  ++YN +
Sbjct: 580 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 639

Query: 637 ITGCVRNGMSSVAYEWFHRMKVR--NISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 690
           I G VR    S A+    +M+     + P+  +Y  ++    ++ + + A  +  +  + 
Sbjct: 640 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 699

[Close]

BLAST of CSPI03G25980.1 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-29
Identity = 113/502 (22.51%), Postives = 214/502 (42.63%), Query Frame = 1


Query: 194 VFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGA-VKQSGELSRM 253
           VF  +++ + R   ++ A+++V        + +G   P +  YN++L A ++    +S  
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLA-----QAHG-FMPGVLSYNAVLDATIRSKRNISFA 195

Query: 254 ENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRA 313
           ENV  +M +  +  NV TYN ++  +   G    AL + ++M  KG   + V+Y+T +  
Sbjct: 196 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 255

Query: 314 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKG 373
           Y +++  +   K +  +  +     +                     + Y V+    + G
Sbjct: 256 YCKLRKIDDGFKLLRSMALKGLEPNL---------------------ISYNVV----ING 315

Query: 374 DCASTKVLQL---LMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGIS 433
            C   ++ ++   L EM++ G SLD      LI       +++ A  ++  +       S
Sbjct: 316 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 375

Query: 434 LSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWR 493
           +     +I  M KA     A+E  + +  +G  PN  +Y  +V  F+       ++G   
Sbjct: 376 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-------QKGYMN 435

Query: 494 WGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALL 553
              R+L +M + G  P    +NA++       +   AI +   M E+G  P V+SY  +L
Sbjct: 436 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 495

Query: 554 SALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIE 613
           S   +    DEA  V   M+  G++P+   Y+++   F  Q +         +M+  G+ 
Sbjct: 496 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 555

Query: 614 PTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYEL 673
           P   TY A+I      G    A +  + M  + + P+ V+Y +LI  L K+ + R A  L
Sbjct: 556 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 599

Query: 674 YMRAKDEGLNLSSKVYDAVIES 692
            ++   E    S   Y  +IE+
Sbjct: 616 LLKLFYEESVPSDVTYHTLIEN 599

[Close]

BLAST of CSPI03G25980.1 vs. Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-28
Identity = 117/506 (23.12%), Postives = 222/506 (43.87%), Query Frame = 1


Query: 195 FSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMEN 254
           +S +I  F R  +L+ A++ +     + ++T  +++  ++ YNSL+    + G++S  E 
Sbjct: 405 YSILIDMFCRRGKLDTALSFLG----EMVDTGLKLS--VYPYNSLINGHCKFGDISAAEG 464

Query: 255 VLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYR 314
            + +M  + +   VVTY ++M  Y  +G   KAL +  EM  KG+  S  +++T L    
Sbjct: 465 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL- 524

Query: 315 RMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDC 374
                             +R G I   D V   NE  +      RV Y VM    ++G C
Sbjct: 525 ------------------FRAGLIR--DAVKLFNEMAEWNVKPNRVTYNVM----IEGYC 584

Query: 375 AS---TKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLS 434
                +K  + L EM + G+  D      LI         + AK     + +  C ++  
Sbjct: 585 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 644

Query: 435 VCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWG 494
               ++    +  K   AL + ++++++G        +L +  + VL+  + K    +  
Sbjct: 645 CYTGLLHGFCREGKLEEALSVCQEMVQRG-------VDLDLVCYGVLIDGSLKHKDRKLF 704

Query: 495 VRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSA 554
             LL +M ++GL+P    + +++ A S+  +   A  I+  M+ +G  P  ++Y A+++ 
Sbjct: 705 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 764

Query: 555 LEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVE-VTINDMVASGIEP 614
           L K    +EA  +   M  V   PN   Y     + T +G+ +M + V +++ +  G+  
Sbjct: 765 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHNAILKGLLA 824

Query: 615 TVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELY 674
              TYN +I G  R G    A E   RM    +SP+ ++Y  +I  L +    + A EL+
Sbjct: 825 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 871

Query: 675 MRAKDEGLNLSSKVYDAVIESSQLYG 697
               ++G+      Y+ +I    + G
Sbjct: 885 NSMTEKGIRPDRVAYNTLIHGCCVAG 871

[Close]

BLAST of CSPI03G25980.1 vs. TrEMBL
Match: A0A0A0LB88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595200 PE=4 SV=1)

HSP 1 Score: 1442.9 bits (3734), Expect = 0.0e+00
Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 1


Query: 1   MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60
           MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC
Sbjct: 1   MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60

Query: 61  YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120
           YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD
Sbjct: 61  YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120

Query: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV 180
           GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV
Sbjct: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV 180

Query: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240
           DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL
Sbjct: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240

Query: 241 GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT 300
           GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT
Sbjct: 241 GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT 300

Query: 301 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV 360
           LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV
Sbjct: 301 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV 360

Query: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR 420
           CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR
Sbjct: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR 420

Query: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 480
           IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT
Sbjct: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 480

Query: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP 540
           AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP
Sbjct: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP 540

Query: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600
           TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI
Sbjct: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600

Query: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660
           NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE
Sbjct: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660

Query: 661 GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 716
           GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS
Sbjct: 661 GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 715

[Close]

BLAST of CSPI03G25980.1 vs. TrEMBL
Match: A0A061EDB6_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein, putative OS=Theobroma cacao GN=TCM_017045 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 4.3e-251
Identity = 441/718 (61.42%), Postives = 543/718 (75.63%), Query Frame = 1


Query: 1   MHALSNWCPTSCSGV-------ELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLS 60
           M ALS W P +   +       ELGS           K++  ++ R  +  F L+S    
Sbjct: 1   MQALSIW-PLNVGSLVVPHLDFELGSSCFASTKPSSRKTWSLAESRGPS--FLLLSSYSR 60

Query: 61  VLRSGFCYENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITR 120
             RSG CY N      C F    S+L+VV   +  R S       AWA+EQ  I +E+ R
Sbjct: 61  FSRSGTCYRNLNCSLRCGFLCWYSELKVVLFCEPKRGSSRGLVALAWALEQQEIGNELER 120

Query: 121 VESNSRDGLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQL 180
            ES+SRDG           D+G  +        S   EGE+E     R+DVRALA+ LQ 
Sbjct: 121 EESHSRDG-----------DNGNEDKNEEMDASS---EGEVELEESARLDVRALASSLQF 180

Query: 181 ARTADDVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNL 240
           A+TADD+++VLKDM ELPLQV SSMI+GFGRD  ++ A+ALV+WLKRKK ++ G + PNL
Sbjct: 181 AKTADDIEKVLKDMDELPLQVHSSMIKGFGRDNYMDAAMALVEWLKRKKNDSGGSVGPNL 240

Query: 241 FIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEE 300
           FIYNSLLGAVK S +   ME +L DM +EG++ N+VTYN +M+IYLEQG A KAL +LEE
Sbjct: 241 FIYNSLLGAVKHSKQFREMEKILKDMEEEGVIPNIVTYNVLMAIYLEQGEATKALNVLEE 300

Query: 301 MPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKL 360
           + +KG + SPVSYSTAL AYRRM+DGNGALKF +ELRE+Y  G++ KD + +W  EF+KL
Sbjct: 301 IQEKGFSPSPVSYSTALLAYRRMEDGNGALKFFIELREKYVKGDLGKDADENWEYEFVKL 360

Query: 361 ENFTRRVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNV 420
           ENFT R+C QVMR WLVK +  ST VL+LL +MD AGL L + + ER+IWACTC EHY V
Sbjct: 361 ENFTVRICQQVMRRWLVKDENLSTNVLKLLRDMDNAGLKLSKEDYERIIWACTCEEHYVV 420

Query: 421 AKELYFRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVS 480
           AKELY RIRE+   ISLSVCNH+IWLMGKAKKWWAALE+YE+LL+KGP PNN+SYEL++S
Sbjct: 421 AKELYSRIRERHSEISLSVCNHLIWLMGKAKKWWAALEVYEELLDKGPSPNNLSYELVMS 480

Query: 481 HFNVLLTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKM 540
           HFN+LLTAA+KRGIWRWGVRLLNKME+KGL+PGSREWNAVLVACS+A+ET+AA+ IFR+M
Sbjct: 481 HFNILLTAARKRGIWRWGVRLLNKMEDKGLKPGSREWNAVLVACSKASETTAAVQIFRRM 540

Query: 541 VEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKF 600
           VEQGEKPT++SYGALLSALEKGKLYDEA  VWDHMI+VGV+PN+YAYT MAS+ TG+G F
Sbjct: 541 VEQGEKPTIISYGALLSALEKGKLYDEALRVWDHMIKVGVKPNLYAYTIMASIVTGKGNF 600

Query: 601 NMVEVTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELL 660
            MV     +M +SGIEPTVVTYNAII+GC RNGMSS AYEWFHRMKV+NISPNE++Y++L
Sbjct: 601 RMVNAVFQEMASSGIEPTVVTYNAIISGCARNGMSSAAYEWFHRMKVQNISPNEITYQML 660

Query: 661 IEALAKEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDR 712
           IEALAK+GKPRLAYELY+RA +EGLNLSSK YDAV++SSQ+YGA+ ++ +LG RPPD+
Sbjct: 661 IEALAKDGKPRLAYELYLRAHNEGLNLSSKAYDAVVQSSQVYGATTDLSVLGPRPPDK 701

[Close]

BLAST of CSPI03G25980.1 vs. TrEMBL
Match: V4U3G6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014357mg PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 7.1e-246
Identity = 432/697 (61.98%), Postives = 534/697 (76.61%), Query Frame = 1


Query: 25  RSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFCYENSRFVCNCEFRHGCSKLRVVPL 84
           + W  V+S     C   N GF L+S N +    G C  + +    CEF  G S  ++V  
Sbjct: 37  KKWSLVESV----CHSRNTGFLLVSSNSTFSCCGVCCRSIKLDSKCEFLSGFSSHKLVLF 96

Query: 85  MKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDDGKVNGENSHG 144
            +  ++  GA  + AW++EQ  I + +   E NS DGL         D       E++  
Sbjct: 97  CEPKKSYFGASVMFAWSMEQQEIGNGLLVEEPNSADGLLVETESDIVDYRSVHRVEDTGD 156

Query: 145 GGSFKDEGELEGVGDV--------RVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFS 204
            G+  +  E+E +G+         RVDV+ALA  L   +TADDV++VLKDM ELP QV S
Sbjct: 157 NGNQVESEEVEIIGERGVGKQKSGRVDVKALAQSLWHTKTADDVEEVLKDMGELPPQVHS 216

Query: 205 SMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVL 264
           SMIRGFG+++R +CA+ALV+WLKRKK ET G I PNLF+YNSLLGAVKQS +   M+ ++
Sbjct: 217 SMIRGFGKEKRTDCAMALVEWLKRKKRETGGFIGPNLFVYNSLLGAVKQSQKFEEMDRIM 276

Query: 265 TDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRM 324
            DMA+EG+  NVVTYNT+M+IY+EQG   KAL +LEE+ KKGLT S VSYS AL AYRRM
Sbjct: 277 NDMAEEGVNPNVVTYNTLMAIYIEQGEGTKALNVLEEIKKKGLTPSAVSYSQALLAYRRM 336

Query: 325 KDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCAS 384
           +DGNGALKF VELRE+Y  GEI K D+ +W NEF+KL++F  R+CYQVMR WLVK +  S
Sbjct: 337 EDGNGALKFFVELREKYLKGEIGKGDDENWENEFVKLKDFIIRICYQVMRRWLVKDENLS 396

Query: 385 TKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHV 444
           T VL+LL+EMDKAGL   +AE ERL+WACT  EHY VAKE Y RIRE+   ISLSVCNH+
Sbjct: 397 TNVLKLLIEMDKAGLRPVKAEYERLVWACTREEHYVVAKEFYARIRERHDEISLSVCNHL 456

Query: 445 IWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLN 504
           IWLMGKAKKWWAALE+YEDLL+KGPKPNNMSYELIVSHFN+LL+AA+KRGIWRWGVRLLN
Sbjct: 457 IWLMGKAKKWWAALEVYEDLLDKGPKPNNMSYELIVSHFNILLSAARKRGIWRWGVRLLN 516

Query: 505 KMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGK 564
           KMEEKGL+PGSREWNAVLVACS+A+E +AA+ IF++MVE+GEKPT++SYGALLSALEKGK
Sbjct: 517 KMEEKGLKPGSREWNAVLVACSKASEYNAAVQIFKRMVEKGEKPTIISYGALLSALEKGK 576

Query: 565 LYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYN 624
           LYDEA  VW HM+ VG EPN+YAYT MAS+FT QGKFN+VE+   +M +S IEPTVVTYN
Sbjct: 577 LYDEASRVWQHMLNVGAEPNLYAYTIMASIFTAQGKFNLVELIFREMASSRIEPTVVTYN 636

Query: 625 AIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 684
           AII+ C +NGMSS AYEWFHRMKV+NISPNE++YE+LIEALAK+GKPRLAY+LY+RA++E
Sbjct: 637 AIISACGQNGMSSAAYEWFHRMKVQNISPNEITYEMLIEALAKDGKPRLAYDLYLRARNE 696

Query: 685 GLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNK 714
            LNLSSK YDA++E SQ+YGA++++ +LG RPPD+ K
Sbjct: 697 ELNLSSKAYDAILEFSQVYGATIDLTVLGPRPPDKKK 729

[Close]

BLAST of CSPI03G25980.1 vs. TrEMBL
Match: F6GX65_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00200 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 1.9e-243
Identity = 438/705 (62.13%), Postives = 536/705 (76.03%), Query Frame = 1


Query: 17  LGSYSVVHRSWKRVKSFGFSD--CRCGNWGFSLISFNLSVLRSGFCYENSRFVCNCEFRH 76
           LGS S+  R   R K +   D  C+  +  F  +S +    R G    + +F   C    
Sbjct: 23  LGSSSIPSRRRGRRKLWNPEDPVCQYRSLAFLWVSSSSRSDRVGVYCGSPKFDFGCGLLS 82

Query: 77  GCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDD 136
           G SKL++  L +  R S GA    AWA+EQ  I +E  + +SNS   L     +  D D 
Sbjct: 83  GYSKLKIFLLCERKRGSFGASFALAWALEQQAIGNEFVKEDSNSIHSLAGN-TETVDIDC 142

Query: 137 GKVNGENSHGGGSFKDEGELEGVGDV------RVDVRALAAQLQLARTADDVDQVLKDMV 196
            KV+G         ++E E E  G+V       VDVRALA  L+ A TADDV++VLKD V
Sbjct: 143 LKVDGARDGDENDNEEEKEAEKNGEVIEEKSRNVDVRALAHGLEFATTADDVEEVLKDKV 202

Query: 197 ELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGE 256
           ELPLQV+S+MIRGFG D+RL+ A+ALV+WLKRKK ETNG   PNLF+YNSLLGAVKQS +
Sbjct: 203 ELPLQVYSTMIRGFGTDKRLDAAMALVEWLKRKK-ETNGSKGPNLFVYNSLLGAVKQSEK 262

Query: 257 LSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYST 316
            + +E V+ DMA+EGI+ NVVTYNT+MSIYLEQG +++AL ILEE+ K GL  SPVSYST
Sbjct: 263 FALVEKVMNDMAREGILPNVVTYNTLMSIYLEQGRSVEALNILEEIQKNGLCPSPVSYST 322

Query: 317 ALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIW 376
           AL  YRRM+DG+GALKF +ELRE Y  GEI KD + DW NEF+KL+NFT R+CYQVMR W
Sbjct: 323 ALLVYRRMEDGHGALKFFIELRENYLKGEIGKDADEDWENEFVKLKNFTIRICYQVMRRW 382

Query: 377 LVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGI 436
           LVK    S  +L+LL +MD AGL   RAE ERL+WACT  EHY VAKELY RIRE+   I
Sbjct: 383 LVKEGNQSPILLKLLADMDNAGLQPGRAEYERLVWACTREEHYVVAKELYTRIRERHTEI 442

Query: 437 SLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIW 496
           SLSVCNH+IWLMGKAKKWWAALEIYEDLL+KGPKPNN+SYEL+VSHFN+LLTAA+K+GIW
Sbjct: 443 SLSVCNHIIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYELVVSHFNILLTAARKKGIW 502

Query: 497 RWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGAL 556
           RWGVRLLNKME+KGL+PGSREWNAVLVACS+AAETSAA++IFR+MVEQGEKPT++SYGAL
Sbjct: 503 RWGVRLLNKMEDKGLKPGSREWNAVLVACSKAAETSAAVEIFRRMVEQGEKPTIISYGAL 562

Query: 557 LSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGI 616
           LSALEKGKLYDEA  VW+HM+++GVEPN+YAYT MAS+  GQGK   V+  + +M   GI
Sbjct: 563 LSALEKGKLYDEASRVWEHMVKMGVEPNLYAYTIMASICVGQGKLQRVDSILREMETLGI 622

Query: 617 EPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYE 676
           + TVVTYNAII+GC RNG+SS A+EWFHRMKV  I PNE++YE+LIEALAK+GKPRLA+E
Sbjct: 623 DATVVTYNAIISGCARNGLSSAAFEWFHRMKVGKIQPNEITYEMLIEALAKDGKPRLAFE 682

Query: 677 LYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNK 714
           LY RA++EGLNLS+K YDAV+ SSQ++ A++++ LLG RPP++ K
Sbjct: 683 LYSRAQNEGLNLSTKAYDAVVLSSQVHSATIDVSLLGPRPPEKKK 725

[Close]

BLAST of CSPI03G25980.1 vs. TrEMBL
Match: A0A0D2V3F1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G091600 PE=4 SV=1)

HSP 1 Score: 847.8 bits (2189), Expect = 9.5e-243
Identity = 429/669 (64.13%), Postives = 516/669 (77.13%), Query Frame = 1


Query: 45  FSLISFNLSVLRSGFCYENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQ 104
           F L+S      RS  C  N       EF    SKL+VV   +    S      SAWA+E+
Sbjct: 49  FLLLSSYARFSRSETCCRNLNCCLRFEFLCCYSKLKVVLFCEPKGGSSSGLVASAWALER 108

Query: 105 PTIDDEITRVESNSRDGLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDV 164
               +E+ R  S S+D           DD+G  NG+ S        EGE+E +   R+DV
Sbjct: 109 QETGNELEREGSYSKD-----------DDNG--NGDRSEEV-DISSEGEVE-LESARIDV 168

Query: 165 RALAAQLQLARTADDVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIE 224
           RALA  LQ A+TADD+ +VLKDM ELPLQV SSMI GFGRD+ ++ A++LV+WLKRKK E
Sbjct: 169 RALARSLQFAKTADDIGKVLKDMGELPLQVHSSMISGFGRDKYMDAAMSLVEWLKRKKKE 228

Query: 225 TNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLA 284
           + G I PNLFIYNSLLGAVK S +   ME +L DMA+EGI+ N+VTYN +M+IY+EQG A
Sbjct: 229 SGGGIGPNLFIYNSLLGAVKHSKQFGEMEKILDDMAEEGIIPNIVTYNVLMAIYVEQGEA 288

Query: 285 MKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNV 344
            KAL +LEE+ +KG + SPVSYSTAL AYRRM+DG+GALKF +ELRE+Y  G+I ++ + 
Sbjct: 289 TKALNVLEEIQEKGFSPSPVSYSTALYAYRRMEDGHGALKFFIELREKYVKGDIGRNADE 348

Query: 345 DWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWA 404
           +W  EF+KLE FT R+C QVMR WLVK +  ST VL+LL +MD  GL L R + ERLIWA
Sbjct: 349 NWEYEFVKLEKFTVRICQQVMRRWLVKDENLSTNVLKLLRDMDNVGLKLSREDYERLIWA 408

Query: 405 CTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPN 464
           CT  EHY VAKELY RIRE    ISLSVCNH+IW+MGKAKKWWAALEIYEDLL+KGP PN
Sbjct: 409 CTREEHYLVAKELYSRIRESFSEISLSVCNHLIWVMGKAKKWWAALEIYEDLLDKGPSPN 468

Query: 465 NMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETS 524
           NMSYEL+VSHFN+LL+AA++RGIWRWGVRLLNKMEEKGL+PGSREWNAVLVACS+A+ET+
Sbjct: 469 NMSYELVVSHFNILLSAARQRGIWRWGVRLLNKMEEKGLKPGSREWNAVLVACSKASETT 528

Query: 525 AAIDIFRKMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMA 584
           AA+ IFR+MVEQGEKPT++SYGALLSALEKGKLYDEA  VWDHMI+VGV+PN+YAYT MA
Sbjct: 529 AAVQIFRRMVEQGEKPTIISYGALLSALEKGKLYDEALRVWDHMIKVGVKPNLYAYTIMA 588

Query: 585 SVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNIS 644
           S+FTGQG F MV     +M +SGIEPTVVTYNAII+GC RNGMSS AYEWFHRMKV+NIS
Sbjct: 589 SIFTGQGNFKMVNAVFQEMASSGIEPTVVTYNAIISGCARNGMSSAAYEWFHRMKVQNIS 648

Query: 645 PNEVSYELLIEALAKEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLL 704
           PNE++YE+LIEALA +GKPRLAY+LYMRA++E LNLSSK YDAV++SSQ+YGA+  + +L
Sbjct: 649 PNEITYEMLIEALANDGKPRLAYDLYMRAQNESLNLSSKAYDAVVQSSQVYGATTYLSVL 702

Query: 705 GLRPPDRNK 714
           G RPPD  K
Sbjct: 709 GPRPPDTKK 702

[Close]

BLAST of CSPI03G25980.1 vs. TAIR10
Match: AT3G46610.1 (AT3G46610.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 765.8 bits (1976), Expect = 2.4e-221
Identity = 385/637 (60.44%), Postives = 484/637 (75.98%), Query Frame = 1


Query: 77  SKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDDGK 136
           S  +V+ L +  R+ LG+     WA EQ                    R L+  +++   
Sbjct: 61  SNRKVLFLCEPKRSLLGSSFGVGWATEQ--------------------RELELGEEEVST 120

Query: 137 VNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFS 196
            +  +++GG             ++RVDVR LA  L+ A+TADDVD VLKD  ELPLQVF 
Sbjct: 121 EDLSSANGGEK----------NNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVFC 180

Query: 197 SMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVL 256
           +MI+GFG+D+RL+ AVA+VDWLKRKK E+ G I PNLFIYNSLLGA++  GE    E +L
Sbjct: 181 AMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEA---EKIL 240

Query: 257 TDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRM 316
            DM +EGIV N+VTYNT+M IY+E+G  +KALGIL+   +KG   +P++YSTAL  YRRM
Sbjct: 241 KDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRM 300

Query: 317 KDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCAS 376
           +DG GAL+F VELRE+Y   EI  D   DW  EF+KLENF  R+CYQVMR WLVK D  +
Sbjct: 301 EDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWT 360

Query: 377 TKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHV 436
           T+VL+LL  MD AG+   R E ERLIWACT  EHY V KELY RIRE+   ISLSVCNH+
Sbjct: 361 TRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHL 420

Query: 437 IWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLN 496
           IWLMGKAKKWWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIWRWGVRLLN
Sbjct: 421 IWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLN 480

Query: 497 KMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGK 556
           KME+KGL+P  R WNAVLVACS+A+ET+AAI IF+ MV+ GEKPTV+SYGALLSALEKGK
Sbjct: 481 KMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGK 540

Query: 557 LYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYN 616
           LYDEA  VW+HMI+VG+EPN+YAYTTMASV TGQ KFN+++  + +M + GIEP+VVT+N
Sbjct: 541 LYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFN 600

Query: 617 AIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 676
           A+I+GC RNG+S VAYEWFHRMK  N+ PNE++YE+LIEALA + KPRLAYEL+++A++E
Sbjct: 601 AVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNE 660

Query: 677 GLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNK 714
           GL LSSK YDAV++S++ YGA++++ LLG RP  +N+
Sbjct: 661 GLKLSSKPYDAVVKSAETYGATIDLNLLGPRPDKKNR 664

[Close]

BLAST of CSPI03G25980.1 vs. TAIR10
Match: AT5G14350.1 (AT5G14350.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-35
Identity = 67/101 (66.34%), Postives = 86/101 (85.15%), Query Frame = 1


Query: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600
           TV S+GALLSALEKGKLYDE   VW+HM++VG+EPN+YAYTTMASV TGQ K N+++  +
Sbjct: 139 TVKSHGALLSALEKGKLYDEVLRVWNHMVKVGIEPNLYAYTTMASVLTGQQKLNLLDTLL 198

Query: 601 NDMVASG-IEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKV 641
            +M + G I+P+VVTYNA+I+GC RNG+S VAYEWFHRM++
Sbjct: 199 KEMPSKGIIKPSVVTYNAVISGCTRNGLSGVAYEWFHRMRI 239

[Close]

BLAST of CSPI03G25980.1 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 2.1e-31
Identity = 112/486 (23.05%), Postives = 223/486 (45.88%), Query Frame = 1


Query: 196 SSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENV 255
           +++IRGF R  +   A  +++ L     E +G + P++  YN ++    ++GE++   +V
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEIL-----EGSGAV-PDVITYNVMISGYCKAGEINNALSV 200

Query: 256 LTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRR 315
           L  M+   +  +VVTYNTI+    + G   +A+ +L+ M ++      ++Y+  + A  R
Sbjct: 201 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 260

Query: 316 MKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCA 375
                 A+K + E+R+R    ++                     V Y V    LV G C 
Sbjct: 261 DSGVGHAMKLLDEMRDRGCTPDV---------------------VTYNV----LVNGICK 320

Query: 376 STKV---LQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSV 435
             ++   ++ L +M  +G   +      ++ +      +  A++L   +  K    S+  
Sbjct: 321 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 380

Query: 436 CNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGV 495
            N +I  + +      A++I E + + G +PN++SY  ++  F       K++ + R  +
Sbjct: 381 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF------CKEKKMDR-AI 440

Query: 496 RLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSAL 555
             L +M  +G  P    +N +L A  +  +   A++I  ++  +G  P +++Y  ++  L
Sbjct: 441 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 500

Query: 556 EKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTV 615
            K     +A  + D M    ++P+   Y+++    + +GK +      ++    GI P  
Sbjct: 501 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 560

Query: 616 VTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMR 675
           VT+N+I+ G  ++  +  A ++   M  R   PNE SY +LIE LA EG  + A EL   
Sbjct: 561 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 585

Query: 676 AKDEGL 679
             ++GL
Sbjct: 621 LCNKGL 585

[Close]

BLAST of CSPI03G25980.1 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-30
Identity = 112/493 (22.72%), Postives = 222/493 (45.03%), Query Frame = 1


Query: 217 WLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMS 276
           W   ++I  +G +  N++  N ++ A+ + G++ ++   L+ + ++G+  ++VTYNT++S
Sbjct: 220 WGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 279

Query: 277 IYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRA------YRRMKD----------GN 336
            Y  +GL  +A  ++  MP KG +    +Y+T +        Y R K+            
Sbjct: 280 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 339

Query: 337 GALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCY-QVMRIWLVKGDCASTKV 396
            +  +   L E  + G++ + + V   ++    +     VC+  +M ++   G+    K 
Sbjct: 340 DSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNL--DKA 399

Query: 397 LQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWL 456
           L     + +AGL  D      LI         +VA  L   + ++ C + +   N ++  
Sbjct: 400 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 459

Query: 457 MGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKME 516
           + K K    A +++ ++ E+   P+  SY L      +L+    K G  +  + L  KM+
Sbjct: 460 LCKRKMLGEADKLFNEMTERALFPD--SYTL-----TILIDGHCKLGNLQNAMELFQKMK 519

Query: 517 EKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSAL-EKGKLY 576
           EK +R     +N +L    +  +   A +I+  MV +   PT +SY  L++AL  KG L 
Sbjct: 520 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL- 579

Query: 577 DEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAI 636
            EA  VWD MI   ++P +    +M   +   G  +  E  +  M++ G  P  ++YN +
Sbjct: 580 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 639

Query: 637 ITGCVRNGMSSVAYEWFHRMKVR--NISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 690
           I G VR    S A+    +M+     + P+  +Y  ++    ++ + + A  +  +  + 
Sbjct: 640 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 699

[Close]

BLAST of CSPI03G25980.1 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-30
Identity = 113/502 (22.51%), Postives = 214/502 (42.63%), Query Frame = 1


Query: 194 VFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGA-VKQSGELSRM 253
           VF  +++ + R   ++ A+++V        + +G   P +  YN++L A ++    +S  
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLA-----QAHG-FMPGVLSYNAVLDATIRSKRNISFA 195

Query: 254 ENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRA 313
           ENV  +M +  +  NV TYN ++  +   G    AL + ++M  KG   + V+Y+T +  
Sbjct: 196 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 255

Query: 314 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKG 373
           Y +++  +   K +  +  +     +                     + Y V+    + G
Sbjct: 256 YCKLRKIDDGFKLLRSMALKGLEPNL---------------------ISYNVV----ING 315

Query: 374 DCASTKVLQL---LMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGIS 433
            C   ++ ++   L EM++ G SLD      LI       +++ A  ++  +       S
Sbjct: 316 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 375

Query: 434 LSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWR 493
           +     +I  M KA     A+E  + +  +G  PN  +Y  +V  F+       ++G   
Sbjct: 376 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-------QKGYMN 435

Query: 494 WGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALL 553
              R+L +M + G  P    +NA++       +   AI +   M E+G  P V+SY  +L
Sbjct: 436 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 495

Query: 554 SALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIE 613
           S   +    DEA  V   M+  G++P+   Y+++   F  Q +         +M+  G+ 
Sbjct: 496 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 555

Query: 614 PTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYEL 673
           P   TY A+I      G    A +  + M  + + P+ V+Y +LI  L K+ + R A  L
Sbjct: 556 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 599

Query: 674 YMRAKDEGLNLSSKVYDAVIES 692
            ++   E    S   Y  +IE+
Sbjct: 616 LLKLFYEESVPSDVTYHTLIEN 599

[Close]

BLAST of CSPI03G25980.1 vs. NCBI nr
Match: gi|778681758|ref|XP_011651578.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis sativus])

HSP 1 Score: 1442.9 bits (3734), Expect = 0.0e+00
Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 1


Query: 1   MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60
           MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC
Sbjct: 1   MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60

Query: 61  YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120
           YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD
Sbjct: 61  YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120

Query: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV 180
           GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV
Sbjct: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV 180

Query: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240
           DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL
Sbjct: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240

Query: 241 GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT 300
           GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT
Sbjct: 241 GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT 300

Query: 301 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV 360
           LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV
Sbjct: 301 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV 360

Query: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR 420
           CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR
Sbjct: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR 420

Query: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 480
           IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT
Sbjct: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 480

Query: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP 540
           AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP
Sbjct: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP 540

Query: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600
           TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI
Sbjct: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600

Query: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660
           NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE
Sbjct: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660

Query: 661 GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 716
           GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS
Sbjct: 661 GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 715

[Close]

BLAST of CSPI03G25980.1 vs. NCBI nr
Match: gi|659098232|ref|XP_008450041.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis melo])

HSP 1 Score: 1203.0 bits (3111), Expect = 0.0e+00
Identity = 601/632 (95.09%), Postives = 615/632 (97.31%), Query Frame = 1


Query: 84  LMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDDGKVNGENSH 143
           L K NRNSL A+CLSAW VEQPTI DE+ RVESNSRDGLPER LDWD DDD  VNGENSH
Sbjct: 10  LCKPNRNSLEAWCLSAWTVEQPTIGDELPRVESNSRDGLPERRLDWDGDDDDNVNGENSH 69

Query: 144 GGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFSSMIRGFG 203
           GGGSFKDEGE+EGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFSSMIRGFG
Sbjct: 70  GGGSFKDEGEMEGVGDVRVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFSSMIRGFG 129

Query: 204 RDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEG 263
           RDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGEL +MENVLT+MAQEG
Sbjct: 130 RDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELLKMENVLTEMAQEG 189

Query: 264 IVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGAL 323
           IVSNVVTYNTIMSIYLEQGLA KALGILEEMPKKGLTLSPVSYSTALRAYR+MKDGNGAL
Sbjct: 190 IVSNVVTYNTIMSIYLEQGLATKALGILEEMPKKGLTLSPVSYSTALRAYRKMKDGNGAL 249

Query: 324 KFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLL 383
           +FMVELRERY NGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLL
Sbjct: 250 EFMVELRERYHNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLL 309

Query: 384 MEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWLMGKA 443
           MEMDKAGLSLDRAE ERLIWACTCAEHYNVAKELY RIREKQCGISLSVCNHVIWLMGKA
Sbjct: 310 MEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYIRIREKQCGISLSVCNHVIWLMGKA 369

Query: 444 KKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGL 503
           KKWWAALEIYE+LLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGL
Sbjct: 370 KKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGL 429

Query: 504 RPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGKLYDEARS 563
           RPGSREWNAVLVACSRAAETSAAIDIFR+MVEQGEKPTVLSYGALLSALEKGKLYDEARS
Sbjct: 430 RPGSREWNAVLVACSRAAETSAAIDIFRRMVEQGEKPTVLSYGALLSALEKGKLYDEARS 489

Query: 564 VWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAIITGCV 623
           VWDHMIRVGVEPNIYAYTTMASVFT QGKFNMVEVTINDMVASGIEPTVVTYNAIITGCV
Sbjct: 490 VWDHMIRVGVEPNIYAYTTMASVFTSQGKFNMVEVTINDMVASGIEPTVVTYNAIITGCV 549

Query: 624 RNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDEGLNLSSK 683
           RNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELY RAKDEGLNLSSK
Sbjct: 550 RNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYRRAKDEGLNLSSK 609

Query: 684 VYDAVIESSQLYGASVNIKLLGLRPPDRNKSS 716
           +YDAVIESSQLYGAS++I+LLGLRPPD+NKSS
Sbjct: 610 IYDAVIESSQLYGASIDIRLLGLRPPDKNKSS 641

[Close]

BLAST of CSPI03G25980.1 vs. NCBI nr
Match: gi|590646689|ref|XP_007031692.1| (Pentatricopeptide repeat (PPR-like) superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 875.5 bits (2261), Expect = 6.1e-251
Identity = 441/718 (61.42%), Postives = 543/718 (75.63%), Query Frame = 1


Query: 1   MHALSNWCPTSCSGV-------ELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLS 60
           M ALS W P +   +       ELGS           K++  ++ R  +  F L+S    
Sbjct: 1   MQALSIW-PLNVGSLVVPHLDFELGSSCFASTKPSSRKTWSLAESRGPS--FLLLSSYSR 60

Query: 61  VLRSGFCYENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITR 120
             RSG CY N      C F    S+L+VV   +  R S       AWA+EQ  I +E+ R
Sbjct: 61  FSRSGTCYRNLNCSLRCGFLCWYSELKVVLFCEPKRGSSRGLVALAWALEQQEIGNELER 120

Query: 121 VESNSRDGLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQL 180
            ES+SRDG           D+G  +        S   EGE+E     R+DVRALA+ LQ 
Sbjct: 121 EESHSRDG-----------DNGNEDKNEEMDASS---EGEVELEESARLDVRALASSLQF 180

Query: 181 ARTADDVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNL 240
           A+TADD+++VLKDM ELPLQV SSMI+GFGRD  ++ A+ALV+WLKRKK ++ G + PNL
Sbjct: 181 AKTADDIEKVLKDMDELPLQVHSSMIKGFGRDNYMDAAMALVEWLKRKKNDSGGSVGPNL 240

Query: 241 FIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEE 300
           FIYNSLLGAVK S +   ME +L DM +EG++ N+VTYN +M+IYLEQG A KAL +LEE
Sbjct: 241 FIYNSLLGAVKHSKQFREMEKILKDMEEEGVIPNIVTYNVLMAIYLEQGEATKALNVLEE 300

Query: 301 MPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKL 360
           + +KG + SPVSYSTAL AYRRM+DGNGALKF +ELRE+Y  G++ KD + +W  EF+KL
Sbjct: 301 IQEKGFSPSPVSYSTALLAYRRMEDGNGALKFFIELREKYVKGDLGKDADENWEYEFVKL 360

Query: 361 ENFTRRVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNV 420
           ENFT R+C QVMR WLVK +  ST VL+LL +MD AGL L + + ER+IWACTC EHY V
Sbjct: 361 ENFTVRICQQVMRRWLVKDENLSTNVLKLLRDMDNAGLKLSKEDYERIIWACTCEEHYVV 420

Query: 421 AKELYFRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVS 480
           AKELY RIRE+   ISLSVCNH+IWLMGKAKKWWAALE+YE+LL+KGP PNN+SYEL++S
Sbjct: 421 AKELYSRIRERHSEISLSVCNHLIWLMGKAKKWWAALEVYEELLDKGPSPNNLSYELVMS 480

Query: 481 HFNVLLTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKM 540
           HFN+LLTAA+KRGIWRWGVRLLNKME+KGL+PGSREWNAVLVACS+A+ET+AA+ IFR+M
Sbjct: 481 HFNILLTAARKRGIWRWGVRLLNKMEDKGLKPGSREWNAVLVACSKASETTAAVQIFRRM 540

Query: 541 VEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKF 600
           VEQGEKPT++SYGALLSALEKGKLYDEA  VWDHMI+VGV+PN+YAYT MAS+ TG+G F
Sbjct: 541 VEQGEKPTIISYGALLSALEKGKLYDEALRVWDHMIKVGVKPNLYAYTIMASIVTGKGNF 600

Query: 601 NMVEVTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELL 660
            MV     +M +SGIEPTVVTYNAII+GC RNGMSS AYEWFHRMKV+NISPNE++Y++L
Sbjct: 601 RMVNAVFQEMASSGIEPTVVTYNAIISGCARNGMSSAAYEWFHRMKVQNISPNEITYQML 660

Query: 661 IEALAKEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDR 712
           IEALAK+GKPRLAYELY+RA +EGLNLSSK YDAV++SSQ+YGA+ ++ +LG RPPD+
Sbjct: 661 IEALAKDGKPRLAYELYLRAHNEGLNLSSKAYDAVVQSSQVYGATTDLSVLGPRPPDK 701

[Close]

BLAST of CSPI03G25980.1 vs. NCBI nr
Match: gi|567909807|ref|XP_006447217.1| (hypothetical protein CICLE_v10014357mg [Citrus clementina])

HSP 1 Score: 858.2 bits (2216), Expect = 1.0e-245
Identity = 432/697 (61.98%), Postives = 534/697 (76.61%), Query Frame = 1


Query: 25  RSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFCYENSRFVCNCEFRHGCSKLRVVPL 84
           + W  V+S     C   N GF L+S N +    G C  + +    CEF  G S  ++V  
Sbjct: 37  KKWSLVESV----CHSRNTGFLLVSSNSTFSCCGVCCRSIKLDSKCEFLSGFSSHKLVLF 96

Query: 85  MKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRDGLPERGLDWDDDDDGKVNGENSHG 144
            +  ++  GA  + AW++EQ  I + +   E NS DGL         D       E++  
Sbjct: 97  CEPKKSYFGASVMFAWSMEQQEIGNGLLVEEPNSADGLLVETESDIVDYRSVHRVEDTGD 156

Query: 145 GGSFKDEGELEGVGDV--------RVDVRALAAQLQLARTADDVDQVLKDMVELPLQVFS 204
            G+  +  E+E +G+         RVDV+ALA  L   +TADDV++VLKDM ELP QV S
Sbjct: 157 NGNQVESEEVEIIGERGVGKQKSGRVDVKALAQSLWHTKTADDVEEVLKDMGELPPQVHS 216

Query: 205 SMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLLGAVKQSGELSRMENVL 264
           SMIRGFG+++R +CA+ALV+WLKRKK ET G I PNLF+YNSLLGAVKQS +   M+ ++
Sbjct: 217 SMIRGFGKEKRTDCAMALVEWLKRKKRETGGFIGPNLFVYNSLLGAVKQSQKFEEMDRIM 276

Query: 265 TDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLTLSPVSYSTALRAYRRM 324
            DMA+EG+  NVVTYNT+M+IY+EQG   KAL +LEE+ KKGLT S VSYS AL AYRRM
Sbjct: 277 NDMAEEGVNPNVVTYNTLMAIYIEQGEGTKALNVLEEIKKKGLTPSAVSYSQALLAYRRM 336

Query: 325 KDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRVCYQVMRIWLVKGDCAS 384
           +DGNGALKF VELRE+Y  GEI K D+ +W NEF+KL++F  R+CYQVMR WLVK +  S
Sbjct: 337 EDGNGALKFFVELREKYLKGEIGKGDDENWENEFVKLKDFIIRICYQVMRRWLVKDENLS 396

Query: 385 TKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFRIREKQCGISLSVCNHV 444
           T VL+LL+EMDKAGL   +AE ERL+WACT  EHY VAKE Y RIRE+   ISLSVCNH+
Sbjct: 397 TNVLKLLIEMDKAGLRPVKAEYERLVWACTREEHYVVAKEFYARIRERHDEISLSVCNHL 456

Query: 445 IWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLN 504
           IWLMGKAKKWWAALE+YEDLL+KGPKPNNMSYELIVSHFN+LL+AA+KRGIWRWGVRLLN
Sbjct: 457 IWLMGKAKKWWAALEVYEDLLDKGPKPNNMSYELIVSHFNILLSAARKRGIWRWGVRLLN 516

Query: 505 KMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGK 564
           KMEEKGL+PGSREWNAVLVACS+A+E +AA+ IF++MVE+GEKPT++SYGALLSALEKGK
Sbjct: 517 KMEEKGLKPGSREWNAVLVACSKASEYNAAVQIFKRMVEKGEKPTIISYGALLSALEKGK 576

Query: 565 LYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTINDMVASGIEPTVVTYN 624
           LYDEA  VW HM+ VG EPN+YAYT MAS+FT QGKFN+VE+   +M +S IEPTVVTYN
Sbjct: 577 LYDEASRVWQHMLNVGAEPNLYAYTIMASIFTAQGKFNLVELIFREMASSRIEPTVVTYN 636

Query: 625 AIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKEGKPRLAYELYMRAKDE 684
           AII+ C +NGMSS AYEWFHRMKV+NISPNE++YE+LIEALAK+GKPRLAY+LY+RA++E
Sbjct: 637 AIISACGQNGMSSAAYEWFHRMKVQNISPNEITYEMLIEALAKDGKPRLAYDLYLRARNE 696

Query: 685 GLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNK 714
            LNLSSK YDA++E SQ+YGA++++ +LG RPPD+ K
Sbjct: 697 ELNLSSKAYDAILEFSQVYGATIDLTVLGPRPPDKKK 729

[Close]

BLAST of CSPI03G25980.1 vs. NCBI nr
Match: gi|719977153|ref|XP_010248762.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Nelumbo nucifera])

HSP 1 Score: 855.5 bits (2209), Expect = 6.6e-245
Identity = 428/671 (63.79%), Postives = 527/671 (78.54%), Query Frame = 1


Query: 47  LISFNLSVLRSGFCYENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPT 106
           L+S   +  R+G C  N  F          SK + V   ++ RN  GA    AWA+EQ  
Sbjct: 55  LVSRTSAEFRTGACCWNPNFTPQYGIFFSLSKQKFVLFCESKRNLFGASFALAWALEQRA 114

Query: 107 IDDEITRVESNSRDGLPERG---LDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVD 166
           I +E     SN  D L + G   L +D++ +  +  E    GG   +  ++    + R+D
Sbjct: 115 IGNEFATEASNPPDKLSKDGECHLSFDEEVNETILSEGGGPGGEASENEKVVEDNNTRID 174

Query: 167 VRALAAQLQLARTADDVDQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKI 226
           VRALA  L+L +T  DV+++LKDM ELPL V+SS+IRGFG ++RLE A+ALV+WL+ KK 
Sbjct: 175 VRALAWSLRLVKTVGDVEEILKDMGELPLPVYSSIIRGFGIEKRLESAMALVEWLRTKKK 234

Query: 227 ETNGRIAPNLFIYNSLLGAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGL 286
           E      PNLFIYNSLLGAVKQS +    E V+ DMA+EGI+ NVVTYNT+MSIYLEQG 
Sbjct: 235 EIKDFSGPNLFIYNSLLGAVKQSEQFGEAERVMKDMAEEGILPNVVTYNTLMSIYLEQGQ 294

Query: 287 AMKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDD- 346
           ++KAL +L+E+ +KGL+ SP+SYSTAL AYRRM+DG+GALKF VELRE+Y+ GEI KD+ 
Sbjct: 295 SIKALDLLKEIQEKGLSPSPISYSTALLAYRRMEDGDGALKFFVELREKYQKGEIGKDNT 354

Query: 347 NVDWANEFLKLENFTRRVCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLI 406
           + DW NEF+KLE F  R+CYQVMR WLVKGD  +++VL+LL +MDK GL   RAE ERL+
Sbjct: 355 DEDWENEFVKLEKFIIRICYQVMRRWLVKGDHLNSRVLKLLTDMDKVGLRPGRAEHERLV 414

Query: 407 WACTCAEHYNVAKELYFRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPK 466
           WACT   HY VAKELY RIRE++  ISLSVCNH+IWLMGKAKKWWAALEIYEDLL+KGPK
Sbjct: 415 WACTLEGHYTVAKELYNRIRERESDISLSVCNHIIWLMGKAKKWWAALEIYEDLLDKGPK 474

Query: 467 PNNMSYELIVSHFNVLLTAAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAE 526
           PNN+SYELIVSHFN+LLTAA++RGIWRWGVRLLNKME+KGL+PGSREWNAVLVACS+A+E
Sbjct: 475 PNNLSYELIVSHFNILLTAARRRGIWRWGVRLLNKMEDKGLKPGSREWNAVLVACSKASE 534

Query: 527 TSAAIDIFRKMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTT 586
           TSAA+ IFR+MVEQGEKPT+LSYGALLSALEKGKLYDEA  VWDHM++VGVEPN+YAYTT
Sbjct: 535 TSAAVQIFRRMVEQGEKPTILSYGALLSALEKGKLYDEALRVWDHMVKVGVEPNLYAYTT 594

Query: 587 MASVFTGQGKFNMVEVTINDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRN 646
           MASV  GQG+   V+  I DM++SGIEPTVVTYNAII+GC RNG+ S A+EWFHRMKV+N
Sbjct: 595 MASVCIGQGRPERVDSLIRDMISSGIEPTVVTYNAIISGCARNGIGSTAFEWFHRMKVQN 654

Query: 647 ISPNEVSYELLIEALAKEGKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIK 706
           ISPNE++YE+LIEALAK+ KPRLAYELY+RA+ EGL+LSSK YDAVIESS+ YGA++++ 
Sbjct: 655 ISPNEITYEMLIEALAKDAKPRLAYELYLRAQKEGLHLSSKAYDAVIESSRYYGATIDVS 714

Query: 707 LLGLRPPDRNK 714
           +LG RPP++ K
Sbjct: 715 VLGPRPPEKKK 725

The following BLAST results are available for this feature:

BLAST of CSPI03G25980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP264_ARATH	4.3e-220	60.44	Pentatricopeptide repeat-containing protein At3g46610 OS=Arabidopsis thaliana GN...	[more]
PPR28_ARATH	3.7e-30	23.05	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN...	[more]
PP360_ARATH	1.8e-29	22.72	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN...	[more]
PP407_ARATH	5.4e-29	22.51	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN...	[more]
PP437_ARATH	1.2e-28	23.12	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]

BLAST of CSPI03G25980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB88_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595200 PE=4 SV=1	[more]
A0A061EDB6_THECC	4.3e-251	61.42	Pentatricopeptide repeat (PPR-like) superfamily protein, putative OS=Theobroma c...	[more]
V4U3G6_9ROSI	7.1e-246	61.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014357mg PE=4 SV=1	[more]
F6GX65_VITVI	1.9e-243	62.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00200 PE=4 SV=...	[more]
A0A0D2V3F1_GOSRA	9.5e-243	64.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G091600 PE=4 SV=1	[more]

BLAST of CSPI03G25980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46610.1	2.4e-221	60.44	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G14350.1	1.1e-35	66.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	2.1e-31	23.05	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G01110.1	1.0e-30	22.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39710.1	3.0e-30	22.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CSPI03G25980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778681758\|ref\|XP_011651578.1\|	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis sativu...	[more]
gi\|659098232\|ref\|XP_008450041.1\|	0.0e+00	95.09	PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Cucumis melo]	[more]
gi\|590646689\|ref\|XP_007031692.1\|	6.1e-251	61.42	Pentatricopeptide repeat (PPR-like) superfamily protein, putative [Theobroma cac...	[more]
gi\|567909807\|ref\|XP_006447217.1\|	1.0e-245	61.98	hypothetical protein CICLE_v10014357mg [Citrus clementina]	[more]
gi\|719977153\|ref\|XP_010248762.1\|	6.6e-245	63.79	PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Nelumbo nucife...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G25980	CSPI03G25980	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G25980.1	CSPI03G25980.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G25980.1.utr5p1	CSPI03G25980.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G25980.1.cds1	CSPI03G25980.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G25980.1.utr3p1	CSPI03G25980.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 194..215 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 267..313 score: 2.0E-11coord: 610..659 score: 5.4
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 544..577 score: 1.4E-5coord: 613..647 score: 6.6E-9coord: 510..541 score: 4.9E-5coord: 269..300 score: 7.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 191..225 score: 7.925coord: 646..680 score: 9.843coord: 267..301 score: 10.83coord: 611..645 score: 11.564coord: 541..575 score: 10.6coord: 471..505 score: 8.495coord: 429..463 score: 8.396coord: 302..332 score: 6.939coord: 232..266 score: 8.857coord: 576..610 score: 8.955coord: 506..540 score: 9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 270..319 score: 4.9E-5coord: 507..610 score: 4.9E-5coord: 644..672 score: 4.9E-5coord: 432..465 score: 4.
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 386..701 score: 6.9E-297coord: 165..328 score: 6.9E
None	No IPR available	PANTHER	PTHR24015:SF641	PENTATRICOPEPTIDE REPEAT REPEAT-CONTAINING PROTEIN	coord: 165..328 score: 6.9E-297coord: 386..701 score: 6.9E