CSPI03G19840.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G19840.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	E3 ubiquitin-protein ligase
Location	Chr3 : 15508218 .. 15512332 (+)
Sequence length	999

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAACCAATCTCTTGGCTTTGGGATATCAATTTTTACTCATCAAAGAACCGAATCAACGGTGCCATTATTAGCTCACGCTCTCTCTCTTTCTCTCTTCCTCTCTTTCTCACACACACTTCAAACACCTGAGAACAAGAGAGGAACAACACAAAGGGGTTAGAGGAACCAAGTAAAGAACCTCTTTTTTCGGGTTAAAAGGGCTTATTCCCTTCTGGGTATCCATCAAATCAATCTTCCTCTTTTTCCCTTTTCATTCTTTGCTTCTTTCCTACTCTGCCAAACCCAGAAAATTTTCTGAGGTCTTGATCGATTCTAGATTTGGATAAGTGGGTTTTTGTGTTCAGGTCTATAGGGTTTCTTTTTCTGTAAATGGATTTGGATAGTATCGAGTGTGTATCGTCTTCTGATGGTCTCGATGAGGATGAGATTCATCTGCACCACACCCTTCATCCTTATTCCCAATCTCATCATCATCCCGAGTTGTCCGCATCTAAGCCTCGTTATGGAAACAATAATAGCGCTGTGAACGGTGGTCCCACTGCAACTGCGCCGGCAACTAACGTTCATGAATTGCTGGAATGCCCTGTGTGTACTAATTCTATGTACCCTCCCATCCATCAGGTTTGCCTTCGTACTTCTAATTACTTACACAATGGAGATTGTTTGGATTGGCCCTGCAAACCCCATAATTGGATTTTTTTTTTTTTTTCATTTGGATGTGAAAAATGGGTTCTCATTAATTTTTCTCTGAAGGGGATTTGGATTATGGTCTATTGATCAATTGTTGGTTAGAATTTGTGGCTGGTGTTGAACTAGTGGTTTAGTTTACTTGAAACTTCTCAGAAGATGTCTTGTTTTGCTTTTCTTAACTCTCATTTGTCAGGAGCTTAACTTTGTTTATAAATAATTGATTGTTCTAGTTAATGTTTTATATCACATATGGAGTACTGCATCAAACCGGAGATGATGTAAGGCAAGCTTGGAGTGCATATAATTAGCGGAAAAATAATAGAGAAATTAAAAGAAAGCAATAAAATAGAAAAAACTCCAAACCAGCTAAAAATTATCACAATAACACAAAACAATGCTCCTCTCCCAATCCCGATTACAAAAAACATTTTCTCAATGTTTTTCTGTACTACTCAATATTTAACTAGACTTAACACACCTAAACACGAGTGTTACAAATTAGAGACAACTTGAAAACAAAGACACAGGCTCCTACAATTTGAAACCAAAGGCATAGACTCCTTTTATAGTGTTTGATGTATGTATGTTGAACTTTGGTCTGGTAAATTTGGCATTGTGGTATACTGGTTTCAAAACTGTATTTTCTTCTCCTAAGCTAGAAAATAAGATATCTTGGTTTTTGGTAGTTTTAATAAAACTGTTTTATGTTGTTGCATCAGTCGTAAACCATCAAACTCCCTCTTTTATTAAGGTTTTATAGCTTTAAGATTGTATAAAGAGATTAGGTTACTTGTCCCGTTCCTAAAAGCTTATATTTTTAATTCTAGCATAAGATGCTTGTAGTTTCTACCAATTTGCTATGGAAATTTCATTTGGTTTAGTTATAAACGTTACTTTGGAAGACTGATGAAATTTTACCTTTCACCTTTTTTCCTTTGGGATATCATTTCCCATCCTCGTAGATTTTCTTCTACTTCATGTATGATTTGAACTTACCTTTATATACAGTTGAGAATATGCATATTGCATGCTGTATTCCAATAATCGTCTTAGGACATAATATTGTTTGCTATAAGTGTAACAAAGGATTTTGAAGGGAGTGGTTTTGACCCCACCCGCCTACCTGCAATATTATATCTTGTGAGTTTCTACAATGACCAATTGTTGTAGGGTTAGAATAGTTAGGGTGTGTACAAGTTTTGTTGGATAGATCAATGCTAGTATGTAAATGTCGGTTAACCTTGTGACCAACTAAAATGTTGCAGTGCCACAACGGACATACCTTATGTTCCACATGTAAAACGAGAGTTCATAACCGGTGCCCAACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTGGCACTGGAAAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTTCCATACTACAGTAAACTTAAGCATGAGGGTTTGTGCAACTACAGACCCTATAGTTGTCCATATGCTGGGTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGACATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAGTCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTGTAAGTTTGATATATTTGACCTTAACTCTCAAATTGATTCTCATTCTCTCTTTTTTCATTGCACTTGCCTCTTGAATTGATACTTACAATACATTATATGCACGCCTGTGTATGTATGCTTAGGTAAATATGTATGTATGTATTTGTTATTTCACTCGGTATCTATTAGGGTAAGAGGAGGGCAAAGGTATCAAACCCAATTATGAAACTCAGGACATTAGAGGACTCCAACCAGTTGGAAGCAGACTAAAGACATGTTTGGAAGTGTTTTCGTTTCTTTCTTTTTTTTTTAAGAATGTTTGAGAGTGATTTCAAAATCATTAAAATCATTCTTATTATGTTTAAAATCAATTTAAAACATGTATTTGATCACCCAAATCATTTTCTTAAATGCAATTTTCATTGAATTGATTTTGAAGGATTGAAAACATGTTTTGAAATAACAGAAATGATTTTGGTCCTTTCAGGACCACTCCCAAACATGCTCTAAGGATGATGAAAGTCCACTAATATAAGCATGCTGGAAGCGTCGCTAACCTGAACAAAACAAGCCAAACTAAAAAAGAAGGCTTTAATTAAGCTGAATAAGACGGAAAACTTAACTTAAGTCACTAACAAGAGTCCACGGATCTTCCTTGGTTCTCCCCCACTTTCTAAATCTCCCGTGGTTTCTCTTTAACCACACACTCTATGACACCATGCATACAGATAAGCTAAGATAAATTTTGTTGATGCGAAGAAGGAACTATGACAAGTTGATTATAAGCTTGGTCACTTTTCGTTTTCTTTTATTTTATGAAACTTTGGCCATGATTTTGTTTGTTTCCTTCAGAAGCAACTTGATGTGATGCAATAAGATAACAGTATGATTTGAATATCAAAGGTTTAAAAGTACATGTTTTTATGTATATTTTTCAAGATTCCTTTTATCAAAGTGATGGATTTATGCATTTCCGGTTCAAGTGTTTCTCTCAAATCTGTATAAACGAAGCAAGCTAGTTTGGTCACGGGATGCCAAAACTACCAGTAACTGAAATGGGTATTTATGTGTTTGATCAAAATGAGGCCTTGGAGCATCGAGCATGAGGATATTCCGTTGGTCTTACCCCATATTTTAGATTAATCACATGTCTTGTGGCTTGCGCTTCTCACATTTTGCAGGTTTTTCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAGGCTTTTCAGCTCGGCATGGCTCCAGTCTACATGGCTTTCCTCCGTTTCATGGGCGATGAGAATGATGCCCGAACCTACAGCTACAGTCTCGAGGTTGGTGGATATGGGCGAAAACTGATATGGGAGGGTACACCACGAAGTATTAGAGATAGTCATCGAAAAGTTAGGGACAGCCATGATGGATTAATTATCCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGGGACAGAAAGGAACTGAAGCTGAGGGTTACAGGAAGGATATGGAAGGAACAAAACCCGGATGCTGGTGTTTGCATACCAAACCTTTGTAGCTAAAATCGAAGTGTTTACTTAATGCCTGCCTTTCTGTGTGTTTTTGACAGTACTCTGCTTTGTACCTATTCTCATATATTGTGACGGGTGATATTTTTTAATTGTATATACTTGAGAGAATTCTTGATCTTCAAATCAACAATGGTGCCAAAATTGTAACATTCACCAACTTATAAGTGGATTTTCGTGTATCCTTGCTTGGAAGTTCAGGAGTTAAGTACAAGGGGTTAATCTAGGAACACATGAATGATTG

mRNA sequence

ATGGATTTGGATAGTATCGAGTGTGTATCGTCTTCTGATGGTCTCGATGAGGATGAGATTCATCTGCACCACACCCTTCATCCTTATTCCCAATCTCATCATCATCCCGAGTTGTCCGCATCTAAGCCTCGTTATGGAAACAATAATAGCGCTGTGAACGGTGGTCCCACTGCAACTGCGCCGGCAACTAACGTTCATGAATTGCTGGAATGCCCTGTGTGTACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAACGGACATACCTTATGTTCCACATGTAAAACGAGAGTTCATAACCGGTGCCCAACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTGGCACTGGAAAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTTCCATACTACAGTAAACTTAAGCATGAGGGTTTGTGCAACTACAGACCCTATAGTTGTCCATATGCTGGGTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGACATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAGTCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTGTTTTTCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAGGCTTTTCAGCTCGGCATGGCTCCAGTCTACATGGCTTTCCTCCGTTTCATGGGCGATGAGAATGATGCCCGAACCTACAGCTACAGTCTCGAGGTTGGTGGATATGGGCGAAAACTGATATGGGAGGGTACACCACGAAGTATTAGAGATAGTCATCGAAAAGTTAGGGACAGCCATGATGGATTAATTATCCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGGGACAGAAAGGAACTGAAGCTGAGGGTTACAGGAAGGATATGGAAGGAACAAAACCCGGATGCTGGTGTTTGCATACCAAACCTTTGTAGCTAA

Coding sequence (CDS)

ATGGATTTGGATAGTATCGAGTGTGTATCGTCTTCTGATGGTCTCGATGAGGATGAGATTCATCTGCACCACACCCTTCATCCTTATTCCCAATCTCATCATCATCCCGAGTTGTCCGCATCTAAGCCTCGTTATGGAAACAATAATAGCGCTGTGAACGGTGGTCCCACTGCAACTGCGCCGGCAACTAACGTTCATGAATTGCTGGAATGCCCTGTGTGTACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAACGGACATACCTTATGTTCCACATGTAAAACGAGAGTTCATAACCGGTGCCCAACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTGGCACTGGAAAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTTCCATACTACAGTAAACTTAAGCATGAGGGTTTGTGCAACTACAGACCCTATAGTTGTCCATATGCTGGGTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGACATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAGTCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTGTTTTTCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAGGCTTTTCAGCTCGGCATGGCTCCAGTCTACATGGCTTTCCTCCGTTTCATGGGCGATGAGAATGATGCCCGAACCTACAGCTACAGTCTCGAGGTTGGTGGATATGGGCGAAAACTGATATGGGAGGGTACACCACGAAGTATTAGAGATAGTCATCGAAAAGTTAGGGACAGCCATGATGGATTAATTATCCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGGGACAGAAAGGAACTGAAGCTGAGGGTTACAGGAAGGATATGGAAGGAACAAAACCCGGATGCTGGTGTTTGCATACCAAACCTTTGTAGCTAA

Homology

[Close]

BLAST of CSPI03G19840.1 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 8.0e-161
Identity = 267/334 (79.94%), Postives = 283/334 (84.73%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDS++C S+ D  D++EIH     +     HHH           NN + VN   +   
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRHSYASVSKHHHTN---------NNTTNVNAAASGLL 60

Query: 61  PAT-NVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 120
           P T +VHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALE
Sbjct: 61  PTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALE 120

Query: 121 KVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHL 180
           KVAESLELPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSECS  GDIPFLVAHL
Sbjct: 121 KVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHL 180

Query: 181 RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240
           RDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA
Sbjct: 181 RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240

Query: 241 FLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFF 300
           FLRFMGDE +AR Y+YSLEVGGYGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALFF
Sbjct: 241 FLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF 300

Query: 301 SGGDRKELKLRVTGRIWKEQNPD---AGVCIPNL 331
           SGGDRKELKLRVTGRIWKEQ       G CIPNL
Sbjct: 301 SGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325

[Close]

BLAST of CSPI03G19840.1 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.7e-158
Identity = 268/336 (79.76%), Postives = 288/336 (85.71%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNG---GPT 60
           M+ DS+ECVSS+           + +H     H   + S++K   G   +AV     GPT
Sbjct: 1   METDSMECVSSTG----------NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPT 60

Query: 61  ATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLA 120
           ATAPAT+V+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLA
Sbjct: 61  ATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLA 120

Query: 121 LEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVA 180
           LEKVAESLELPCK+Y+LGC EIFPYYSKLKHE LCN+RPYSCPYAGSEC  VGDIPFLVA
Sbjct: 121 LEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVA 180

Query: 181 HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVY 240
           HLRDDHKVDMH G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVY
Sbjct: 181 HLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVY 240

Query: 241 MAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMAL 300
           MAFLRFMGDE DAR+YSYSLEVGG GRKL WEGTPRSIRDSHRKVRDS+DGLIIQRNMAL
Sbjct: 241 MAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMAL 300

Query: 301 FFSGGDRKELKLRVTGRIWKEQ-NPDAGVCIPNLCS 333
           FFSGGDRKELKLRVTG+IWKEQ +PD+G+ IPNL S
Sbjct: 301 FFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

[Close]

BLAST of CSPI03G19840.1 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 553.5 bits (1425), Expect = 1.6e-156
Identity = 262/333 (78.68%), Postives = 284/333 (85.29%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           M+ DSI+ V     +D+DEIH  H            + S++K +         G     +
Sbjct: 1   METDSIDSV-----IDDDEIHQKH------------QFSSTKSQ--------GGATVVIS 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PAT+V+ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYY+LGC  IFPYYSKLKHE  CN+RPYSCPYAGSEC+AVGDI FLVAHLR
Sbjct: 121 VAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDE+DAR Y+YSLEVGG GRK  WEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKE-QNPDAGVCIPNLCS 333
           GGD+KELKLRVTGRIWKE QNPD+GVCI ++CS
Sbjct: 301 GGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 308

[Close]

BLAST of CSPI03G19840.1 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 5.0e-131
Identity = 216/287 (75.26%), Postives = 238/287 (82.93%), Query Frame = 1


Query: 37  ELSASKPRYGNNNSAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLC 96
           E+  +K    NN     G    G         V+ELLECPVCTN MYPPIHQC NGHTLC
Sbjct: 22  EVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLC 81

Query: 97  STCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLC 156
           S CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC +IFPYYSKLKHE  C
Sbjct: 82  SNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHC 141

Query: 157 NYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 216
            +RPY+CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWML
Sbjct: 142 RFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWML 201

Query: 217 TVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTP 276
           TVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDEN+A+ +SYSLEVG +GRKL W+G P
Sbjct: 202 TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIP 261

Query: 277 RSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 320
           RSIRDSHRKVRDS DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 262 RSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CSPI03G19840.1 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 4.7e-129
Identity = 207/258 (80.23%), Postives = 229/258 (88.76%), Query Frame = 1


Query: 62  ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV 121
           +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKV
Sbjct: 48  SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKV 107

Query: 122 AESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLRD 181
           AESLE+PC+Y +LGC +IFPYYSKLKHE  C +R YSCPYAGSECS  GDIP LV HL+D
Sbjct: 108 AESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKD 167

Query: 182 DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 241
           DHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFL
Sbjct: 168 DHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFL 227

Query: 242 RFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSG 301
           RFMGDEN+A+ +SYSLEVG + RKL W+G PRSIRDSHRKVRDS DGLII RN+AL+FSG
Sbjct: 228 RFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSG 287

Query: 302 GDRKELKLRVTGRIWKEQ 320
            D++ELKLRVTGRIWKE+
Sbjct: 288 SDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CSPI03G19840.1 vs. TrEMBL
Match: A0A0A0LAJ0_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G239850 PE=3 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 3.1e-204
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 332

[Close]

BLAST of CSPI03G19840.1 vs. TrEMBL
Match: E5GB99_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 8.8e-199
Identity = 321/325 (98.77%), Postives = 324/325 (99.69%), Query Frame = 1


Query: 8   CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATAPATNVHE 67
           CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNN+AVNGGPTATAPATNVHE
Sbjct: 324 CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHE 383

Query: 68  LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 127
           LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 384 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 443

Query: 128 PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDM 187
           PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLRDDHKVDM
Sbjct: 444 PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDM 503

Query: 188 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 247
           HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 504 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 563

Query: 248 NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 307
           NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL
Sbjct: 564 NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 623

Query: 308 KLRVTGRIWKEQNPDAGVCIPNLCS 333
           KLRVTGRIWKEQNP+AGVCIPNLCS
Sbjct: 624 KLRVTGRIWKEQNPEAGVCIPNLCS 648

[Close]

BLAST of CSPI03G19840.1 vs. TrEMBL
Match: A0A0A0LC94_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G239840 PE=3 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 6.9e-196
Identity = 321/332 (96.69%), Postives = 325/332 (97.89%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYS SHHHPELSA+KPR G+NNS +   PTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGI-AVPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHE LCNYRPYSCPYAGSECSAVGDIPFLVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 331

[Close]

BLAST of CSPI03G19840.1 vs. TrEMBL
Match: M5X0U2_PRUPE (E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008410mg PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 2.9e-178
Identity = 298/334 (89.22%), Postives = 307/334 (91.92%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHH-TLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTAT 60
           MDL+SIECVSSSDGLDEDEIH HH TLHP+   H H     SKPR    N+    GPTA 
Sbjct: 1   MDLESIECVSSSDGLDEDEIHQHHNTLHPHPHPHQHHH-DFSKPRSNATNNTTIPGPTAI 60

Query: 61  APATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 120
           APAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE
Sbjct: 61  APATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 120

Query: 121 KVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHL 180
           KVAESLELPCKYYSLGC EIFPYYSKLKHE +CN+RPY+CPYAGSECS VGDIPFLV+HL
Sbjct: 121 KVAESLELPCKYYSLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVSHL 180

Query: 181 RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240
           RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA
Sbjct: 181 RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240

Query: 241 FLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFF 300
           FLRFMGDEN+AR YSYSLEVG  GRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFF
Sbjct: 241 FLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFF 300

Query: 301 SGGDRKELKLRVTGRIWKE-QNPDAGVCIPNLCS 333
           SGGDRKELKLRVTGRIWKE QNPDAGVCIPNLCS
Sbjct: 301 SGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS 333

[Close]

BLAST of CSPI03G19840.1 vs. TrEMBL
Match: W9RLM0_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_006812 PE=3 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 8.5e-178
Identity = 296/339 (87.32%), Postives = 311/339 (91.74%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHH-TLHPYSQSH-----HHPELSASKPRYGNNNSAVNG 60
           MDL+SIECVSSSDGLDED+IH HH TLHP+   H     HH + S+SK R    +++   
Sbjct: 1   MDLESIECVSSSDGLDEDDIHQHHNTLHPHPHPHPHPHQHHSDFSSSKSRSNATSNSTIT 60

Query: 61  GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR 120
           GPTA APAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR
Sbjct: 61  GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIR 120

Query: 121 CLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPF 180
           CLALEKVAESLELPCKYY+LGC EIFPYYSKLKHE +CN+RPY+CPYAGSECS VGDIPF
Sbjct: 121 CLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSHVGDIPF 180

Query: 181 LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240
           LVAHLRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
Sbjct: 181 LVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA 240

Query: 241 PVYMAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN 300
           PVYMAFLRFMGDEN+AR YSYSLEVGG GRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN
Sbjct: 241 PVYMAFLRFMGDENEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN 300

Query: 301 MALFFSGGDRKELKLRVTGRIWKE-QNPDAGVCIPNLCS 333
           MALFFSGGDRKELKLRVTGRIWKE QNPD GVCIPNLCS
Sbjct: 301 MALFFSGGDRKELKLRVTGRIWKEQQNPDTGVCIPNLCS 339

[Close]

BLAST of CSPI03G19840.1 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 567.8 bits (1462), Expect = 4.5e-162
Identity = 267/334 (79.94%), Postives = 283/334 (84.73%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDS++C S+ D  D++EIH     +     HHH           NN + VN   +   
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRHSYASVSKHHHTN---------NNTTNVNAAASGLL 60

Query: 61  PAT-NVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 120
           P T +VHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALE
Sbjct: 61  PTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALE 120

Query: 121 KVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHL 180
           KVAESLELPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSECS  GDIPFLVAHL
Sbjct: 121 KVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHL 180

Query: 181 RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240
           RDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA
Sbjct: 181 RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 240

Query: 241 FLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFF 300
           FLRFMGDE +AR Y+YSLEVGGYGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALFF
Sbjct: 241 FLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF 300

Query: 301 SGGDRKELKLRVTGRIWKEQNPD---AGVCIPNL 331
           SGGDRKELKLRVTGRIWKEQ       G CIPNL
Sbjct: 301 SGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325

[Close]

BLAST of CSPI03G19840.1 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 558.9 bits (1439), Expect = 2.1e-159
Identity = 268/336 (79.76%), Postives = 288/336 (85.71%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNG---GPT 60
           M+ DS+ECVSS+           + +H     H   + S++K   G   +AV     GPT
Sbjct: 1   METDSMECVSSTG----------NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPT 60

Query: 61  ATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLA 120
           ATAPAT+V+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLA
Sbjct: 61  ATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLA 120

Query: 121 LEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVA 180
           LEKVAESLELPCK+Y+LGC EIFPYYSKLKHE LCN+RPYSCPYAGSEC  VGDIPFLVA
Sbjct: 121 LEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVA 180

Query: 181 HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVY 240
           HLRDDHKVDMH G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVY
Sbjct: 181 HLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVY 240

Query: 241 MAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMAL 300
           MAFLRFMGDE DAR+YSYSLEVGG GRKL WEGTPRSIRDSHRKVRDS+DGLIIQRNMAL
Sbjct: 241 MAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMAL 300

Query: 301 FFSGGDRKELKLRVTGRIWKEQ-NPDAGVCIPNLCS 333
           FFSGGDRKELKLRVTG+IWKEQ +PD+G+ IPNL S
Sbjct: 301 FFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

[Close]

BLAST of CSPI03G19840.1 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-132
Identity = 216/287 (75.26%), Postives = 238/287 (82.93%), Query Frame = 1


Query: 37  ELSASKPRYGNNNSAVNG----GPTATAPATNVHELLECPVCTNSMYPPIHQCHNGHTLC 96
           E+  +K    NN     G    G         V+ELLECPVCTN MYPPIHQC NGHTLC
Sbjct: 22  EVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLC 81

Query: 97  STCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLC 156
           S CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC +IFPYYSKLKHE  C
Sbjct: 82  SNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHC 141

Query: 157 NYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 216
            +RPY+CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWML
Sbjct: 142 RFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWML 201

Query: 217 TVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTP 276
           TVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDEN+A+ +SYSLEVG +GRKL W+G P
Sbjct: 202 TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIP 261

Query: 277 RSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 320
           RSIRDSHRKVRDS DGLII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 262 RSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CSPI03G19840.1 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-130
Identity = 207/258 (80.23%), Postives = 229/258 (88.76%), Query Frame = 1


Query: 62  ATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV 121
           +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKV
Sbjct: 48  SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKV 107

Query: 122 AESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLRD 181
           AESLE+PC+Y +LGC +IFPYYSKLKHE  C +R YSCPYAGSECS  GDIP LV HL+D
Sbjct: 108 AESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKD 167

Query: 182 DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 241
           DHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFL
Sbjct: 168 DHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFL 227

Query: 242 RFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSG 301
           RFMGDEN+A+ +SYSLEVG + RKL W+G PRSIRDSHRKVRDS DGLII RN+AL+FSG
Sbjct: 228 RFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSG 287

Query: 302 GDRKELKLRVTGRIWKEQ 320
            D++ELKLRVTGRIWKE+
Sbjct: 288 SDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CSPI03G19840.1 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 427.6 bits (1098), Expect = 7.3e-120
Identity = 195/218 (89.45%), Postives = 206/218 (94.50%), Query Frame = 1


Query: 116 LALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFL 175
           +ALEKVAESLELPCKYY+LGC  IFPYYSKLKHE  CN+RPYSCPYAGSEC+AVGDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 176 VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 235
           VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 236 VYMAFLRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 295
           VYMAFLRFMGDE+DAR Y+YSLEVGG GRK  WEGTPRS+RDSHRKVRDSHDGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 296 ALFFSGGDRKELKLRVTGRIWKE-QNPDAGVCIPNLCS 333
           ALFFSGGD+KELKLRVTGRIWKE QNPD+GVCI ++CS
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 232

[Close]

BLAST of CSPI03G19840.1 vs. NCBI nr
Match: gi|778680480|ref|XP_011651326.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus])

HSP 1 Score: 718.8 bits (1854), Expect = 4.5e-204
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 332

[Close]

BLAST of CSPI03G19840.1 vs. NCBI nr
Match: gi|659133618|ref|XP_008466822.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Cucumis melo])

HSP 1 Score: 713.4 bits (1840), Expect = 1.9e-202
Identity = 328/332 (98.80%), Postives = 331/332 (99.70%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNN+AVNGGPTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNP+AGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPEAGVCIPNLCS 332

[Close]

BLAST of CSPI03G19840.1 vs. NCBI nr
Match: gi|307135875|gb|ADN33741.1| (ubiquitin ligase [Cucumis melo subsp. melo])

HSP 1 Score: 700.7 bits (1807), Expect = 1.3e-198
Identity = 321/325 (98.77%), Postives = 324/325 (99.69%), Query Frame = 1


Query: 8   CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATAPATNVHE 67
           CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNN+AVNGGPTATAPATNVHE
Sbjct: 324 CVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNTAVNGGPTATAPATNVHE 383

Query: 68  LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 127
           LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 384 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 443

Query: 128 PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDM 187
           PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLRDDHKVDM
Sbjct: 444 PCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLRDDHKVDM 503

Query: 188 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 247
           HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 504 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 563

Query: 248 NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 307
           NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL
Sbjct: 564 NDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 623

Query: 308 KLRVTGRIWKEQNPDAGVCIPNLCS 333
           KLRVTGRIWKEQNP+AGVCIPNLCS
Sbjct: 624 KLRVTGRIWKEQNPEAGVCIPNLCS 648

[Close]

BLAST of CSPI03G19840.1 vs. NCBI nr
Match: gi|659133620|ref|XP_008466823.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X2 [Cucumis melo])

HSP 1 Score: 691.0 bits (1782), Expect = 1.0e-195
Identity = 321/332 (96.69%), Postives = 325/332 (97.89%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYS SHHHPELSA+KPR G+NNS +   PTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGI-AVPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHE LCNYRPYSCPYAGSECSAVGDIPFLVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 331

[Close]

BLAST of CSPI03G19840.1 vs. NCBI nr
Match: gi|659133622|ref|XP_008466824.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X3 [Cucumis melo])

HSP 1 Score: 689.1 bits (1777), Expect = 3.8e-195
Identity = 319/332 (96.08%), Postives = 325/332 (97.89%), Query Frame = 1


Query: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSQSHHHPELSASKPRYGNNNSAVNGGPTATA 60
           MDLDSIECVSSSDGLDEDEIHLHHTLHPYS SHHHPELSA+KPR G+NNS +   PTATA
Sbjct: 1   MDLDSIECVSSSDGLDEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGI-AVPTATA 60

Query: 61  PATNVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120
           PAT+VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK
Sbjct: 61  PATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAVGDIPFLVAHLR 180
           VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSA+GDIP LVAHLR
Sbjct: 121 VAESLELPCKYYSLGCTEIFPYYSKLKHEGLCNYRPYSCPYAGSECSAIGDIPLLVAHLR 180

Query: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240
           DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF
Sbjct: 181 DDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300
           LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS
Sbjct: 241 LRFMGDENDARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS 333
           GGDRKELKLRVTGRIWKEQNP+AGVCIPNLCS
Sbjct: 301 GGDRKELKLRVTGRIWKEQNPEAGVCIPNLCS 331

The following BLAST results are available for this feature:

BLAST of CSPI03G19840.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SINA3_ARATH	8.0e-161	79.94	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	[more]
SINA4_ARATH	3.7e-158	79.76	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1	[more]
SINA5_ARATH	1.6e-156	78.68	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	[more]
SINA2_ARATH	5.0e-131	75.26	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1	[more]
SINA1_ARATH	4.7e-129	80.23	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE...	[more]

BLAST of CSPI03G19840.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAJ0_CUCSA	3.1e-204	100.00	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G239850 PE=3 SV=1	[more]
E5GB99_CUCME	8.8e-199	98.77	E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0LC94_CUCSA	6.9e-196	96.69	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G239840 PE=3 SV=1	[more]
M5X0U2_PRUPE	2.9e-178	89.22	E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008410mg PE=3 SV=1	[more]
W9RLM0_9ROSA	8.5e-178	87.32	E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_006812 PE=3 SV=1	[more]

BLAST of CSPI03G19840.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61790.1	4.5e-162	79.94	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	2.1e-159	79.76	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	2.8e-132	75.26	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	2.7e-130	80.23	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	7.3e-120	89.45	TRAF-like superfamily protein	[more]

BLAST of CSPI03G19840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680480\|ref\|XP_011651326.1\|	4.5e-204	100.00	PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus]	[more]
gi\|659133618\|ref\|XP_008466822.1\|	1.9e-202	98.80	PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Cucumis melo]	[more]
gi\|307135875\|gb\|ADN33741.1\|	1.3e-198	98.77	ubiquitin ligase [Cucumis melo subsp. melo]	[more]
gi\|659133620\|ref\|XP_008466823.1\|	1.0e-195	96.69	PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X2 [Cucumis melo]	[more]
gi\|659133622\|ref\|XP_008466824.1\|	3.8e-195	96.08	PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR004162	SINA-like
IPR008974	TRAF-like
IPR013010	Znf_SIAH
IPR013083	Znf_RING/FYVE/PHD
IPR013323	SIAH-type domain
IPR018121	7-in-absentia-prot_TRAF-dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007275	multicellular organism development
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI03G19840	CSPI03G19840	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI03G19840.1	CSPI03G19840.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G19840.1.utr5p1	CSPI03G19840.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G19840.1.cds1	CSPI03G19840.1.cds1	CDS
CSPI03G19840.1.cds2	CSPI03G19840.1.cds2	CDS
CSPI03G19840.1.cds3	CSPI03G19840.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI03G19840.1.utr3p1	CSPI03G19840.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 71..107 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 1..332 score: 4.9E
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 189..316 score: 1.1
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 124..316 score: 6.54
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 124..184 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 54..136 score: 1.8
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 137..179 score: 1.1
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 113..312 score: 1.0
None	No IPR available	PANTHER	PTHR10315:SF34	E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED	coord: 1..332 score: 4.9E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 58..110 score: 1.3