CSPI02G16280.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGTACTTGAAAATTTTCTTCTTACGCATCCGCATCCGCTTTCACTTGATCTTTTCCCATCTTTTTTTGATAGGAAACGAGAAACCATTTTATTTATGTACACGTTCACTTGATTGTTAGGTTTGGTGTTACGAACGTCCCTTTTTGAGATATTGAGCTTGCTCTCTGTTATATACTGTTCAATTTTATCTAATAATTTTTTTGACACACTTATCATTTTTTCATTGAAATTTGGCAGAAGGTTGGTGAGCCTTTGGCTCAAAGGTTTCATTCCACCAACCAATGGAATGAGAATGACCACCATGGATCTAATGGGGGTCATCAATCAGATAATTCAGTTGATAACGAAAGGCAGAGATTTAAGAATAACATTTCTGTTGTTGATTCACACGGAACGCTAGTTCTCCATCAAGATGTTGAGCAAAAAGATGAAGTTTCCATGCGAGTTGATACAGAATCTCGCTTTGAGGACAGCAAGTCGGACAGGATGGTGAATGCCCTTCCTGGTGTTCAGCCTCAAGTTGATAATGCTGGTTGCTCTCAGTTCTCTTCGCCATCTACAACATCTTTCTCTGCTAGCAGGTAAGTAAAGAAGGATGTCATTTATCCTTACTTGTGAAAGGCTATGGTGTTATTTATTTGAATAAGTATAAAGTATGAAATCTGTTTTATGACTTTTCAGGTTTACAATGGATGTAGAATATGATCCACGGATTAAATTGTCTGGACATGGCATAATGCCAAAGGCTGAAGGAAATAATCCCAACAGCCTCTGGAAGCAGGTACATCTCTTTGTTCTATTTTCTTTATTCCATATGTATGAGAAAGCCACTTTGACCTATGTTTCGTATTTAGGACCTTGTTGTTAAAGTTCAGGAACATGAAGATGAAATTGTGCAGTTGCGCAAGCATCTTGCTGATTATTCAATTAAGGTAAAGTGAATTGTATGTGTATCTTAGCTCCTTGCTTAGATGAATTTAATTTTACTTTTATATCCATTTGTGTTAAGAATTAGGATTTCTTTTACTTGGAGTAGATGGTAATTCTTATTGTAACAGGAAGCACAAATACGAAATGAAAAGTATGTCCTGGAAAAACGTATTGCCTATATGCGTTTGGTAAGCAGGTTTTTCTTCTTCTTTCCACTTTTTTTTTGTTTTTGTATTTAGTGTCAATTGTCTTCCCTAAACTTTCTTAATTTTCATTTCCATTCTGATTGGTGCTCTGCTGTTGGGCCTTTCTTCTTCGCCTTCCTTTTACTTTTACTTTTTGGTGTTCGTTAATCAGGCCTTTGATCAACAACAACAAGATCTTGTTGATGCCGCTTCTAAAGCTCTCTCATACAGACAAGACATAATTGAGGAAAACATTCGTCTTACATATGCATTGCAGGTTATTTTGCAGTGCCATTTCAGACATGGCTTCTGGTGTTTTTACAATGCTCAATTTTGTTGGCATTAACTAGTTTGATAAAAATCTAGTAACTATTAAGATGTGAATTGTATTTTCTTTTCTAATGTGAACTTTAATGAACTCAATGTTTCTAATCTGGTTCTATTAGGAAGCACAACAAGAGAGAACGACCTTTGTATCATCTCTACTGCCTCTTCTTGCAGAATATTCTCTGCAGCCTCCTGTTCCTGATGCTCAATCCATCATCAGCAATGTCAAGGTGAGGCTCTATATCTGTGGATTTGAATAAATCACCGTAGACATTGCAAGTTCACGAGGTAGACTATAATTGTAGTGTGGATGATTGAAGGAATTCCCCCCGAGTCCGAATGTTTTGGATAACTTTTACTTGGAGACAATTGAGGGATTCCTTCAATCTTTATTATGATTTTAAAGTGTCCAATACAAGAGATTAACCCTCTATTTATAGAGTATTTACTTCAAATTGTGTTTTAAAAATACTAAAAAGGCTGCCTTCTAGTTTATTTGGTACCTATATGTTCTCCGTTTGTTTCTATGGGATATGATGATGGTGCTAAGGGGGTGTCAACCTAGTTGTGATGTCTGGGTGTGCCTCTTGATCCTCTATTTTTAGGCTTCTCTATTATTCTCACTGTATAATTCTATGGGATATGATGATGGTGCTAAGGGGGTGTCAACCTAGTTGTGATGTCTGGGTGTGCCTCTTGATCCTCTATTTTTAGGCTTCTCTAAATTCCTAAAAAAAAAAAAAAAGATTCAAACTAAAATATAACTACAAACACAAAAGAAATCTTTCTAGATTTCACGGCTAATTTAATTGAATTTTGGGACTATTAGAATCCGCTTCCTGAATTATTATAAATCAACCAGTTGGATTCACATTTTACCCAACCTTCGCTTTCTAGCCTGAAGCATTCTCATTGTATAATTATCTTGTACTTAGAGTTTTATATTAATAAAGAAGCTTGTCTCCATTTCAAAAGAAAAAAAAAACTAAAAAGGAAACAGAAGATTAAACCAAAAATTTTACCAACTACTAAGGTATTCCCTCCTTAAAGAAAATTGTCCTCGAGTTCAAGATAGAAGAAGGTGGATTAAGTAACTAATCATCCTTCACTGATGGTTGTACTCCAACTAAAAGGACTTCCAAAGCTTATCTGTCAAGAAAGTGAATCAATTTGTCTCAATACTTGATGTCCATGCCAAAAGTCTCGTGTCAAGTATCCAAACTATTCCTAGCAACACTAACAACCAAACAAAACAAAAAAGAAAACCAAAAGCTTAAGAAAACACCGTGATACGGAGAGTTATTTGCTATACAGTGGGTTATGTATTTATAAGGATGAGGAAACAATTCTTCACTTTACCGTCTACTGTGTTCATTACCAATGATTCTCAAAGAGAAGGCTCTCTTCCTCTCATACATTATTGTCTAAACTTTTCCTAGCTCCTAGCTTTTTCCCCTCAAAACCCTCACAAGTCCCTTCCCTCCAAACATACCATACTCCACGCATAATCCACTATCAACCCAGGATAAGCGTATTCCTAGCCACTGCCTAACTTACCCCTTCTAGATTGATGATGTAGTAGGATTAGAGTATATTGGTTTAATCCTTAATTGATGTAGCCTAAATGATAAAAAAGAGAAGTCTCCAACAAAAAAAATCAAAGTCTTTTCTATAAATCAAAAGTTATTAATAAAAGAGACAATCCCAGAACTAGAAAGCTCATTAATCCTAATCCTAATAAACTAAGGAAACCAATCCTAATCCTAATATAATTGGGCTGACATCATAGAGATTTCTAAAAGAAATGCAGCAACTTGGTGTTCTTCAAATGCATAATTCAAAGATTACTCCATTCAAGACATCTGCCTCAATTGGACCGCCTTCATCGGATGAGTTACAAAGTAGTTTCCCTCGATTGCCAGTTCAGAAATAGTGCTTTTGTAGTTTGGACGGGTTTTATATGTATTTCTGCCGTTTTGTTTTTCCTTTCAGCCTTGCTTTAGTCTACCATAGGTAGCTTTCGTAGTTATTTTGGTGGTTACTTTGGTCTTTTCATCACCTTAGTATTGTTTTTGTATTTTGGTCTTTTCTTTGTATTTTGGTCTTTTCTTTGTATTTTGGATATGATGAGGGTGCTTTGGGGGTGTCAACCTAATTGAGATGTCCGGGTGCACCTACTTATCCAATCCTAATCCTAATAAACCAAGAAAACTAATCCTAATCTTCTCGGTCACCCATTGAGGATAGTACTATGGATTTTTTATTTAATTGAATATAATATTTTCATGTTTCTTGGTTTTGATCTTATCAATATTAGCTCCATCAAAGACTTCATTCCCTTCTGGTAGCCATAGAGTTTTCTCTTCATAAGGTACATTTTTATTCATGAGGTCATTCACTTGTTGAATGATCCCATGTTCATTTTCCTCCCCCTCGGGGTGATGACTTTGACGTAAATCTGGATTTAGCCTAAGTAGTGTGGGATCTCTCGTGTAGCCATTGATGTGGGAATTCAAAACCTCCTTTTTCAATGCTTTTAGGTTGTTCTCTCTCCCTCCCTTCAGTGCCTAGCAAATTTTCATCTCTTATTGAAGCATATGGTCTTGAGTAGCAAAAGTCCCTTCTTTAACTTCTTAAGGATTGATTTTTTAATCAAGTTACCAGTGAGCTCTCTTATGGTCTTGACATTCTCTTTTAGGTTGACACCCCCTAGCACCATCATCATTTTCCATAGAACATCCATAAGACATAAAATTTCTGAGAAATAACAAAAAACAGTACAGAACAGCCAAGGGAAACAAATTCTGGCAGATAGAAACCAGTACAGAAGCTAAAACAAATCAGTAAAAGACCAAACATTATTAAACCCTATTACTAAACAAAAACATTAAAATCTTCAACTGGAGAAAGCAACCAACTGGTAGATCTTGTGCTCTGAAGCTTGCAGAGGAAACTGCAGCTACAAGGCTGGCTGGGAGATGACAACAGCCCAATTTAGACATAGATCCTGGATGGGATAGTCCTTAAACTCCTTATTTAAAGAGCACCAGGCTGCTGCATTCCGTTTTTGCAGTATCTATCTACAATAACTGACTATACTCTTTCCTTGTCGTGGAAGATCCGTTGATCATGCTCATACCAAATTTCTGCAAGTAGGACTTTAGACATGTTTTCTCAAATTAAAGCGGTTTGTCAAAGTCGGACCCGTCAATTTATTTTTCTTTCCACTCCCTTTGGAGTTTTCATCCTTTCAGTATTTCCCCTTTCATTGTATTAATGAGATGCTGTTTCTTGTTAAAAGAAATAGTAACAATAATAAATGGAAAAGTAATTCGATGGATTTCATACATTCTTGCAGATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGGTACTGAGAATTTATTAGATTAATGCTGGCAAGGGAAACTGTAATTTGATCATTCATTTTCTTTACTTCTCTTTATCGTTCTTGCATTTTACTCGGCGTTGATAGACAAAATTGAAGGAGTCCCAGTATCAATTGACACCTTGGCGCTCTGATGCAAGCCACTCAAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACAGCTTCAGTATGCTCACATCTTTCTTTTATACCTCCTTTCTGAATTAATTTATATGTCTTAATTTTCTAAATTTTATGCCAGACCAAAAATGGCCTTGAACTGGTTCCTCAACCTTCATACTGGAATGGGAAAATGCCAGTTTCTTCTTCTGATGCTCAGACCACAGCTGATTGGGACCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGGAAAGAATTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGGTGAGCGTGGTCACATGAAGACTGCTACTGAACTGAATACAATAACAACCATCTCCATTGTTGGTGCGTTC ATGCAGAAGGTTGGTGAGCCTTTGGCTCAAAGGTTTCATTCCACCAACCAATGGAATGAGAATGACCACCATGGATCTAATGGGGGTCATCAATCAGATAATTCAGTTGATAACGAAAGGCAGAGATTTAAGAATAACATTTCTGTTGTTGATTCACACGGAACGCTAGTTCTCCATCAAGATGTTGAGCAAAAAGATGAAGTTTCCATGCGAGTTGATACAGAATCTCGCTTTGAGGACAGCAAGTCGGACAGGATGGTGAATGCCCTTCCTGGTGTTCAGCCTCAAGTTGATAATGCTGGTTGCTCTCAGTTCTCTTCGCCATCTACAACATCTTTCTCTGCTAGCAGGTTTACAATGGATGTAGAATATGATCCACGGATTAAATTGTCTGGACATGGCATAATGCCAAAGGCTGAAGGAAATAATCCCAACAGCCTCTGGAAGCAGGACCTTGTTGTTAAAGTTCAGGAACATGAAGATGAAATTGTGCAGTTGCGCAAGCATCTTGCTGATTATTCAATTAAGGAAGCACAAATACGAAATGAAAAGTATGTCCTGGAAAAACGTATTGCCTATATGCGTTTGGCCTTTGATCAACAACAACAAGATCTTGTTGATGCCGCTTCTAAAGCTCTCTCATACAGACAAGACATAATTGAGGAAAACATTCGTCTTACATATGCATTGCAGGAAGCACAACAAGAGAGAACGACCTTTGTATCATCTCTACTGCCTCTTCTTGCAGAATATTCTCTGCAGCCTCCTGTTCCTGATGCTCAATCCATCATCAGCAATGTCAAGATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGACAAAATTGAAGGAGTCCCAGTATCAATTGACACCTTGGCGCTCTGATGCAAGCCACTCAAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACAGCTTCAACCAAAAATGGCCTTGAACTGGTTCCTCAACCTTCATACTGGAATGGGAAAATGCCAGTTTCTTCTTCTGATGCTCAGACCACAGCTGATTGGGACCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGGAAAGAATTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGGTGA ATGCAGAAGGTTGGTGAGCCTTTGGCTCAAAGGTTTCATTCCACCAACCAATGGAATGAGAATGACCACCATGGATCTAATGGGGGTCATCAATCAGATAATTCAGTTGATAACGAAAGGCAGAGATTTAAGAATAACATTTCTGTTGTTGATTCACACGGAACGCTAGTTCTCCATCAAGATGTTGAGCAAAAAGATGAAGTTTCCATGCGAGTTGATACAGAATCTCGCTTTGAGGACAGCAAGTCGGACAGGATGGTGAATGCCCTTCCTGGTGTTCAGCCTCAAGTTGATAATGCTGGTTGCTCTCAGTTCTCTTCGCCATCTACAACATCTTTCTCTGCTAGCAGGTTTACAATGGATGTAGAATATGATCCACGGATTAAATTGTCTGGACATGGCATAATGCCAAAGGCTGAAGGAAATAATCCCAACAGCCTCTGGAAGCAGGACCTTGTTGTTAAAGTTCAGGAACATGAAGATGAAATTGTGCAGTTGCGCAAGCATCTTGCTGATTATTCAATTAAGGAAGCACAAATACGAAATGAAAAGTATGTCCTGGAAAAACGTATTGCCTATATGCGTTTGGCCTTTGATCAACAACAACAAGATCTTGTTGATGCCGCTTCTAAAGCTCTCTCATACAGACAAGACATAATTGAGGAAAACATTCGTCTTACATATGCATTGCAGGAAGCACAACAAGAGAGAACGACCTTTGTATCATCTCTACTGCCTCTTCTTGCAGAATATTCTCTGCAGCCTCCTGTTCCTGATGCTCAATCCATCATCAGCAATGTCAAGATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGACAAAATTGAAGGAGTCCCAGTATCAATTGACACCTTGGCGCTCTGATGCAAGCCACTCAAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACAGCTTCAACCAAAAATGGCCTTGAACTGGTTCCTCAACCTTCATACTGGAATGGGAAAATGCCAGTTTCTTCTTCTGATGCTCAGACCACAGCTGATTGGGACCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGGAAAGAATTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGGTGA
BLAST of CSPI02G16280.1 vs. TrEMBL
Match: A0A0A0LN47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336690 PE=4 SV=1) HSP 1 Score: 751.1 bits (1938), Expect = 6.5e-214 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TrEMBL
Match: A0A067JSK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23928 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 1.0e-118 Identity = 244/387 (63.05%), Postives = 285/387 (73.64%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TrEMBL
Match: A0A067DJP4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006014mg PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 2.5e-117 Identity = 244/386 (63.21%), Postives = 290/386 (75.13%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TrEMBL
Match: V4SR89_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10026951mg PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 5.7e-117 Identity = 243/384 (63.28%), Postives = 289/384 (75.26%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TrEMBL
Match: A0A067DK24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006014mg PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 5.7e-117 Identity = 243/384 (63.28%), Postives = 289/384 (75.26%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TAIR10
Match: AT5G23490.1 (AT5G23490.1 unknown protein) HSP 1 Score: 309.7 bits (792), Expect = 2.5e-84 Identity = 181/331 (54.68%), Postives = 213/331 (64.35%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TAIR10
Match: AT5G08440.2 (AT5G08440.2 unknown protein) HSP 1 Score: 241.5 bits (615), Expect = 8.5e-64 Identity = 169/368 (45.92%), Postives = 212/368 (57.61%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. TAIR10
Match: AT3G03560.1 (AT3G03560.1 unknown protein) HSP 1 Score: 88.6 bits (218), Expect = 9.2e-18 Identity = 52/136 (38.24%), Postives = 85/136 (62.50%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. NCBI nr
Match: gi|700207103|gb|KGN62222.1| (hypothetical protein Csa_2G336690 [Cucumis sativus]) HSP 1 Score: 751.1 bits (1938), Expect = 9.4e-214 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. NCBI nr
Match: gi|778670315|ref|XP_011649437.1| (PREDICTED: uncharacterized protein LOC101216431 isoform X1 [Cucumis sativus]) HSP 1 Score: 749.2 bits (1933), Expect = 3.6e-213 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. NCBI nr
Match: gi|778670317|ref|XP_011649438.1| (PREDICTED: uncharacterized protein LOC101216431 isoform X2 [Cucumis sativus]) HSP 1 Score: 747.3 bits (1928), Expect = 1.4e-212 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. NCBI nr
Match: gi|659121871|ref|XP_008460854.1| (PREDICTED: uncharacterized protein LOC103499606 isoform X2 [Cucumis melo]) HSP 1 Score: 745.3 bits (1923), Expect = 5.1e-212 Identity = 378/380 (99.47%), Postives = 380/380 (100.00%), Query Frame = 1
BLAST of CSPI02G16280.1 vs. NCBI nr
Match: gi|659121869|ref|XP_008460853.1| (PREDICTED: uncharacterized protein LOC103499606 isoform X1 [Cucumis melo]) HSP 1 Score: 745.3 bits (1923), Expect = 5.1e-212 Identity = 378/380 (99.47%), Postives = 380/380 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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