CSPI02G11850.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G11850.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ring finger protein, putative
Location	Chr2 : 12188617 .. 12191131 (-)
Sequence length	1260

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCCATTATATGAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGGGTAGGGTTCACATCAAAATCAGCTTTTGAAAAAAGAGAAAAGAAATGAAAATTTTTTTTTGACTTTGTAGGTAGATATGTTCCACAAACTCTAATTAAACCATGGCCCTTTCAACATAGTCTCTCCATTATCATTGGTTCTTATAAATCCATTTTATTATCTTCTTCTTCGTCTTTTCTTTTTTCTTTCTTAACTCACCAATCCAATTATTATATTATTAATAATATATTTGGATATTTTATATTATAGATATTTGGATGGATGGTGTTTTGTTTTACGTATGAATGGGTTTTGCTTTTTGGCATCAAATTTCATGGAAGATCTCTGCTCCCCTCTTCTGTGGGCCACCACTTTTTTACTTTCTCTTCCTCTCTCCCTCACTTACACCCCCCCCTCCTTTCCCAATCATCTTCTTTTCTTTTCTTTTTTCTTTTCTTTTCTTTTCTTATCCCATACTATTTCATTTCGCAAATTAAAATCACAATTCTCCTACTTCATACATCAAATTAAAGGAAATGTAAAGCACTATATATCTAATGTTAATGACTAATGTATATATGTTATTAAAAACATAAGGGTAGGGCCGCACGGATGCTGAGGTGGCAATAGACTTTATAGAAGAATTGGAATGTCATAGTCCGCACCGCACAAGATGAAAACTCAAGAAGGGGCTTTAAATTTGTGAATAGTGACGTGTCATTCATCCAATGTCCTCGTCGACAAATCGCATGGAGGACCTAACAAAGAGTCAAACCTCCCTTCTCTTCTTCTTCCATTAAACCCTTCTTCTCTCTTCATACAAATCTCTCTCTCTCCCCCTCCCTCTCCGCCGTTGCACCACCTCCATGCCGACCTCCCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCCTCTCCCTCTCCCTCTCCTTCTCCTTCCACCTCCTCCTCCTCCGCCGCCGCCGCCAATTTCCCTCCTCCTTCATCCTTACAGCCGGCGAAGCTCCCAGTCGACTTCAGTCCCCCTCTAATAGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGCCTAATCTCTCGCCATCTCATCCCTCCCATTCTCCATCTCCTCCGTCTCCACCGCCGTCGCTGGCGCAGGTGGCGCCGCCGGCGTCGACTTGCTGCCCGATCTTACATCCCGTCCTCCTCTGGCGGCGACTTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTACTACAGATGCCTTCCATGTATTCTCTCCGTACGGTCTGGACGAATCTGTAATCAAAACGATTCCGCTTTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTTTGGAATTTGAAGACGATGATTACGTTAGAACGCTACCGATTTGTTCGCACGCCTTTCATGTTGATTGTATTGATGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTTAGGCCGGAATCTCCATTCACGCCGGTTATGGCAGCTAGAATCCGGCCAAGCTTAGACGATACCATCTTACGAAGCATCATATTGGAACCGTTAGCTGAAGGTCCTCCTACACCTAATCGAGATTCTTATCACGCAACGGAATCAGAGATCACGCCTTGTATTGATGAGCCACGAAATAGTAATTCAGTGGAGGATCAAATGAACGGAAGAGATTTTTTGTTGAAACGATCGTATTCATTCGGATTCGAACGGAGCTTAGCGTCGGAGAGAATGATTCTAGAACCAGCAACCACGTCTCCATGGAGGTACCGTCGTGGAAGCTTCTGGAGCAAACGGCCGTCACCATTCGGATCTCTACCGAAAGCGAGAGTATTCTCATTCCGATACTACAGAGGTATGAAGTCCCCGTTCTTCAGACGAAGAGGAGGATTCTTTCCGTTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGTGGAGGTTCATCGAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCAGTAACAGGCGGAGGAGGAGCAGCGGCGTTTTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAATAGAAGATGAGAGGAGAGGAGAGGAGAAAGGAGGAAAAGAAATGAAAAAACGAGGACACGTGTGCGGCTATGATGAGAGAGGGAAATGGAGGGTGGGAGATAGGGAGGAGGGAAGGAGAGAGAAGCGGCGGCGGTGGTGGTGGAGAGAGAGAATGGTGGTGGGGGGTTTTAATGAAGAGATGTCTGGCAAATTTTGTAGAGGTCATTAATGGGAGGTGGGGAGAAGCATTTAATGAAAAATTGACGAGAGAGAATACACACTCTCTCTCCCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAACTTTAATCGATGAACCACTGCTCATATGAGGTTAAATCCCTACTCTAACAAATTTAATGCAAC

mRNA sequence

ATGCCGACCTCCCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCCTCTCCCTCTCCCTCTCCTTCTCCTTCCACCTCCTCCTCCTCCGCCGCCGCCGCCAATTTCCCTCCTCCTTCATCCTTACAGCCGGCGAAGCTCCCAGTCGACTTCAGTCCCCCTCTAATAGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGCCTAATCTCTCGCCATCTCATCCCTCCCATTCTCCATCTCCTCCGTCTCCACCGCCGTCGCTGGCGCAGGTGGCGCCGCCGGCGTCGACTTGCTGCCCGATCTTACATCCCGTCCTCCTCTGGCGGCGACTTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTACTACAGATGCCTTCCATGTATTCTCTCCGTACGGTCTGGACGAATCTGTAATCAAAACGATTCCGCTTTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTTTGGAATTTGAAGACGATGATTACGTTAGAACGCTACCGATTTGTTCGCACGCCTTTCATGTTGATTGTATTGATGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTTAGGCCGGAATCTCCATTCACGCCGGTTATGGCAGCTAGAATCCGGCCAAGCTTAGACGATACCATCTTACGAAGCATCATATTGGAACCGTTAGCTGAAGGTCCTCCTACACCTAATCGAGATTCTTATCACGCAACGGAATCAGAGATCACGCCTTGTATTGATGAGCCACGAAATAGTAATTCAGTGGAGGATCAAATGAACGGAAGAGATTTTTTGTTGAAACGATCGTATTCATTCGGATTCGAACGGAGCTTAGCGTCGGAGAGAATGATTCTAGAACCAGCAACCACGTCTCCATGGAGGTACCGTCGTGGAAGCTTCTGGAGCAAACGGCCGTCACCATTCGGATCTCTACCGAAAGCGAGAGTATTCTCATTCCGATACTACAGAGGTATGAAGTCCCCGTTCTTCAGACGAAGAGGAGGATTCTTTCCGTTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGTGGAGGTTCATCGAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCAGTAACAGGCGGAGGAGGAGCAGCGGCGTTTTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAATAGAAGATGA

Coding sequence (CDS)

ATGCCGACCTCCCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCCTCTCCCTCTCCCTCTCCTTCTCCTTCCACCTCCTCCTCCTCCGCCGCCGCCGCCAATTTCCCTCCTCCTTCATCCTTACAGCCGGCGAAGCTCCCAGTCGACTTCAGTCCCCCTCTAATAGCCATGGTTGTCGTCATCGCTACTGCCTTTCTCATCGTCACTTACTCTCGCCTAATCTCTCGCCATCTCATCCCTCCCATTCTCCATCTCCTCCGTCTCCACCGCCGTCGCTGGCGCAGGTGGCGCCGCCGGCGTCGACTTGCTGCCCGATCTTACATCCCGTCCTCCTCTGGCGGCGACTTGGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTACTACAGATGCCTTCCATGTATTCTCTCCGTACGGTCTGGACGAATCTGTAATCAAAACGATTCCGCTTTCCGTCTACACTGCCAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTTTGGAATTTGAAGACGATGATTACGTTAGAACGCTACCGATTTGTTCGCACGCCTTTCATGTTGATTGTATTGATGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTTAGGCCGGAATCTCCATTCACGCCGGTTATGGCAGCTAGAATCCGGCCAAGCTTAGACGATACCATCTTACGAAGCATCATATTGGAACCGTTAGCTGAAGGTCCTCCTACACCTAATCGAGATTCTTATCACGCAACGGAATCAGAGATCACGCCTTGTATTGATGAGCCACGAAATAGTAATTCAGTGGAGGATCAAATGAACGGAAGAGATTTTTTGTTGAAACGATCGTATTCATTCGGATTCGAACGGAGCTTAGCGTCGGAGAGAATGATTCTAGAACCAGCAACCACGTCTCCATGGAGGTACCGTCGTGGAAGCTTCTGGAGCAAACGGCCGTCACCATTCGGATCTCTACCGAAAGCGAGAGTATTCTCATTCCGATACTACAGAGGTATGAAGTCCCCGTTCTTCAGACGAAGAGGAGGATTCTTTCCGTTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGTGGAGGTTCATCGAGACGGAGTAAGTCAATGACGAGTCCAATGTTTCTCCGATCGTCAGTAACAGGCGGAGGAGGAGCAGCGGCGTTTTCGTCGAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAATAGAAGATGA

Homology

[Close]

BLAST of CSPI02G11850.1 vs. Swiss-Prot
Match: ATL65_ARATH (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2 SV=2)

HSP 1 Score: 332.4 bits (851), Expect = 7.1e-90
Identity = 228/438 (52.05%), Postives = 273/438 (62.33%), Query Frame = 1


Query: 11  PSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTY 70
           P  S   SPSPSPS+  S    +    P        P++FSPPLIAMVVV+A AFL VTY
Sbjct: 7   PPRSGDNSPSPSPSSGISEEILSRSSDP--------PLEFSPPLIAMVVVLAAAFLFVTY 66

Query: 71  SRLISRHLIPPILHLLRLHRRRWRRWR-RRRRLAARSYIPSSSGGDLDSLPYDSPFFEPT 130
           SRLISR  + P+        RR+RRWR RRRRL   S   S+S    D   + SPF    
Sbjct: 67  SRLISRRFLSPLF-------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF-SPF---P 126

Query: 131 TDAFHV--FSPYGLDESVIKTIPLSVY-------------TAKSRDRECAVCLLEFEDDD 190
            D+FH   +SPYGLD+SVIKT+PL +Y             T+ +  R+CAVCLLEFE+ D
Sbjct: 127 FDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGD 186

Query: 191 YVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRPSLD 250
           YVRTLP+C HAFH++CID WLRSH NCPLCR      A V  P SPF P+MA RIRPSLD
Sbjct: 187 YVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLD 246

Query: 251 DTILRSIILEPLAEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMN---GRDFLLKR 310
           D    +II+     G  TP+R +++   ++ T   ++     SVE+Q +    R   LKR
Sbjct: 247 DEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRELKR 306

Query: 311 SYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRGMKS 370
           SYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR  KS
Sbjct: 307 SYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRSTKS 366

Query: 371 PFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSR 420
           PFFRRR   G F+P+SE          G SSRR+KSMTSPMF R+        A  SSSR
Sbjct: 367 PFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPMFFRT--------APHSSSR 404

[Close]

BLAST of CSPI02G11850.1 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 4.3e-18
Identity = 78/261 (29.89%), Postives = 124/261 (47.51%), Query Frame = 1


Query: 54  LIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSG 113
           +++ +V++    +++ +  L +R       +LLR  RR  RR  R RR     +      
Sbjct: 31  MLSAIVILFFVVILMVFLHLYARW------YLLRARRRHLRRRSRNRRATMVFFTA---- 90

Query: 114 GDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDR--ECAVCLLEFE 173
                        +P+T A  V +  GLD +VIK++P+  ++ ++     ECAVCL EFE
Sbjct: 91  -------------DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFE 150

Query: 174 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSL---- 233
           + +  R LP C H FHVDCID+W  SH+ CPLCR++V    +      AAR R  +    
Sbjct: 151 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVD 210

Query: 234 DDTILRSIILEP-----LAEGPPTPNRDSYHATESEITP-CIDEPRNS-NSVEDQMNGRD 293
            D +L   ++EP     L + P           +S   P  I+ PR + +  ED++  RD
Sbjct: 211 SDPVL---VIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRD 264

Query: 294 FLLKRSYSFGFERSLASERMI 302
               +S+     R L+  RM+
Sbjct: 271 SPASQSFRSPMSRMLSFTRML 264

[Close]

BLAST of CSPI02G11850.1 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-18
Identity = 66/181 (36.46%), Postives = 93/181 (51.38%), Query Frame = 1


Query: 35  FPPPSSLQPAKLPVD------FSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRL 94
           FPPP     A    D      FSP +IA++ V+A+AFL+V+Y   IS++    +  L   
Sbjct: 34  FPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYC-GTVSSL--- 93

Query: 95  HRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKT 154
                     R R+   S   ++ GG   S          + ++++V  P GLDE++I  
Sbjct: 94  ----------RGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINK 153

Query: 155 IPLSVYTAKS---RDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR 207
           I +  Y          +C+VCL EF D + +R LP CSHAFH  CID WL+SH+NCPLCR
Sbjct: 154 ITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCR 200

[Close]

BLAST of CSPI02G11850.1 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-18
Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 35  FPPPSSL----QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHR 94
           FPPP S     +      DFSP LIA++ ++A+AF++V+Y  LIS++           HR
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC----------HR 96

Query: 95  RRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIP 154
           RR          AA + I S       +   ++    P           GLDES+IK+I 
Sbjct: 97  RRHNS--SSTSAAAINRISSDYTWQGTNNNNNNGATNPN-QTIGGGGGDGLDESLIKSI- 156

Query: 155 LSVYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR 209
            +VY  +  D      +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCR
Sbjct: 157 -TVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 204

[Close]

BLAST of CSPI02G11850.1 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.8e-17
Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1


Query: 36  PPPSSL---QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRR 95
           PPPS       +     FSP LIA++ ++ +A ++V+Y  LIS++           HR  
Sbjct: 37  PPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYC----------HRHH 96

Query: 96  WRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLS 155
                             +S  +  +L ++   F  +T         GL+ES+IK+I  +
Sbjct: 97  -----------------QTSSSETLNLNHNGEGFFSSTQRISTNGD-GLNESMIKSI--T 156

Query: 156 VYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAV 215
           VY  KS D      +C+VCL EFE+++ +R LP C+HAFH+ CID WL+SH+NCPLCRA 
Sbjct: 157 VYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAF 197

Query: 216 VFRPESPFTPV 219
           V    +P   V
Sbjct: 217 VTGVNNPTASV 197

[Close]

BLAST of CSPI02G11850.1 vs. TrEMBL
Match: A0A0A0LIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238760 PE=4 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 1.5e-227
Identity = 413/419 (98.57%), Postives = 414/419 (98.81%), Query Frame = 1


Query: 1   MPTSPSPSPSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV 60
           MPT  SPSPSPSPSPSPSPS S S+SSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV
Sbjct: 1   MPT--SPSPSPSPSPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV 60

Query: 61  IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP 120
           IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP
Sbjct: 61  IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP 120

Query: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180
           YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP
Sbjct: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180

Query: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 240
           ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL
Sbjct: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 240

Query: 241 AEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300
           AEGPP PNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM
Sbjct: 241 AEGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300

Query: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360
           ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS
Sbjct: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360

Query: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 420
           WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of CSPI02G11850.1 vs. TrEMBL
Match: W9R1C1_9ROSA (RING-H2 finger protein ATL65 OS=Morus notabilis GN=L484_026978 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 5.8e-147
Identity = 317/463 (68.47%), Postives = 352/463 (76.03%), Query Frame = 1


Query: 1   MPTSPSPSPSPSPSP----------SPSPSPSP-----------------STSSSSAAAA 60
           M  SPSPSPSPSPSP          SP+PSPSP                 ST   S++++
Sbjct: 2   MTLSPSPSPSPSPSPFTGFDWWRAGSPNPSPSPVPAQPSSQAVITGPTSASTLDQSSSSS 61

Query: 61  NFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRW 120
           + PPPS     KLPVDFSPPLIAMVVV+ATAFLIVTYSRLISRH+IPP L +LR      
Sbjct: 62  SSPPPS-----KLPVDFSPPLIAMVVVVATAFLIVTYSRLISRHVIPPFLRILR------ 121

Query: 121 RRWRRRRRLAARSYIPSSSGGDLDSLPY-DSPFFEPTTDAFHVFSPYGLDESVIKTIPLS 180
            RWR+RRR  +RSY+PSSSG DLDSLPY DSPF    +D FHV SPYGLD+SVIKTIPLS
Sbjct: 122 -RWRQRRR-RSRSYLPSSSG-DLDSLPYYDSPF--DASDGFHVLSPYGLDDSVIKTIPLS 181

Query: 181 VYT-AKSRD--------RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPL 240
           +YT AK  D        R+CAVCL+EF+DDDYVRTLP+CSHAFHVDCID+WLRSHANCPL
Sbjct: 182 IYTTAKGGDGSAFRLASRDCAVCLIEFQDDDYVRTLPVCSHAFHVDCIDMWLRSHANCPL 241

Query: 241 CRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEG-PPTPNRDSYHA----TESE 300
           CRA +FRPESPF P+MAARIRPSLDD +LRS+ LEPLAE   PT    +  A    T +E
Sbjct: 242 CRAGIFRPESPFIPLMAARIRPSLDDAVLRSMALEPLAEAIAPTAAAAASSAESASTVAE 301

Query: 301 ITPCID-EPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASER-MILEPATTSPWRYRRGS 360
           ITPC++ E  N  + ED++ GRDFLLKRSYSFGFERS ASER M++EPAT SPWRYRRGS
Sbjct: 302 ITPCVETEISNYRNSEDRIAGRDFLLKRSYSFGFERSAASERMMVMEPATASPWRYRRGS 361

Query: 361 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 420
           FWSKRPSPFGSL K RVFSFRYYRGMKSPFFRR  GFFPLSESS RFS   GGGSSRR+K
Sbjct: 362 FWSKRPSPFGSLSKPRVFSFRYYRGMKSPFFRRSRGFFPLSESSARFSG--GGGSSRRTK 421

[Close]

BLAST of CSPI02G11850.1 vs. TrEMBL
Match: F6HQI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01890 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 8.6e-135
Identity = 278/419 (66.35%), Postives = 318/419 (75.89%), Query Frame = 1


Query: 9   PSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIV 68
           PS  P       PSPS+  S++   ++       P+K+PVDFSPPLIAMVVV+ATAFLIV
Sbjct: 6   PSKPPEHEFRLGPSPSSFVSTSDTNDYQ-----SPSKVPVDFSPPLIAMVVVVATAFLIV 65

Query: 69  TYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEP 128
           TYSRLISRHL+PP L LL    R WRRW RRRR   RS++PSS+ GD++S PY+  F   
Sbjct: 66  TYSRLISRHLLPPFLRLL----RSWRRWHRRRR-RRRSHMPSSA-GDIESPPYNGSF--D 125

Query: 129 TTDAFHVFSPYGLDESVIKTIPLSVYTAK--------SRDRECAVCLLEFEDDDYVRTLP 188
            T+A+ VFSPYGLDESVIKTIPLS+YTAK           R+CAVCLLEFED+D VR LP
Sbjct: 126 ATEAYQVFSPYGLDESVIKTIPLSLYTAKGLSKHGFVDDSRDCAVCLLEFEDNDCVRVLP 185

Query: 189 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 248
           +CSHAFHVDCID+WLRSHANCPLCRA +FR ESPF PVMAARIRPSLDD IL SI+LEPL
Sbjct: 186 VCSHAFHVDCIDIWLRSHANCPLCRAGIFRHESPFIPVMAARIRPSLDDAILESILLEPL 245

Query: 249 AEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 308
           +E  P         T +EI P    PR + S ED+ N RDF+LKRSYSFGFER+  SER+
Sbjct: 246 SEAAP-----ESETTVTEIVPAEPSPRRNQS-EDRFNARDFMLKRSYSFGFERNFPSERL 305

Query: 309 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 368
           ++EPAT SPWRYRRGSFWSKRPSPFGSL K+RVFSFRYYRGMKSPFFRRRG FFPLSES 
Sbjct: 306 VMEPATASPWRYRRGSFWSKRPSPFGSLTKSRVFSFRYYRGMKSPFFRRRGSFFPLSESH 365

Query: 369 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 420
            RFS   GGGSSRR+KS+TSP+F+RSS T      A +S+RLRC D EALLSPERFNRR
Sbjct: 366 ARFS---GGGSSRRTKSLTSPIFIRSSAT------ASASTRLRCRDLEALLSPERFNRR 396

[Close]

BLAST of CSPI02G11850.1 vs. TrEMBL
Match: M1CCZ2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025175 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134
Identity = 283/419 (67.54%), Postives = 325/419 (77.57%), Query Frame = 1


Query: 6   SPSPSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAF 65
           +PSPS + S +  P+ + STS+S++  +  PPP     AKLPVDFSPPLIAMVV+IATAF
Sbjct: 25  APSPSLNHSSTFQPTTTSSTSTSASDLSTTPPP-----AKLPVDFSPPLIAMVVIIATAF 84

Query: 66  LIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPF 125
           +I+TYSRL+SRHL       LRLH R +R WRRRRR     Y+PSSS GD++S PY    
Sbjct: 85  VIITYSRLLSRHL-------LRLHGR-YRLWRRRRR----RYVPSSSAGDIESPPYP--- 144

Query: 126 FEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHA 185
           F PT DAFHV SPYGLD+SVIKTIPLSVYT KS   +CAVCLLEFE++DY+RTLP+CSHA
Sbjct: 145 FNPT-DAFHVLSPYGLDDSVIKTIPLSVYTRKSGVHDCAVCLLEFEENDYMRTLPVCSHA 204

Query: 186 FHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEGPP 245
           FHVDCID+WL+SHANCPLCRA +FRPESPFTP+MAARIRPS DD +L S ILEPL E  P
Sbjct: 205 FHVDCIDIWLKSHANCPLCRAGIFRPESPFTPLMAARIRPSFDDMLLESTILEPLDEIQP 264

Query: 246 TPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 305
               +S   T SEIT     PR +   E++ N RD LLKRSYSFGFER+L SER++LEPA
Sbjct: 265 ----ESDTTTVSEITQ-EPSPRRNIQSEERFNRRDILLKRSYSFGFERNLGSERLMLEPA 324

Query: 306 TTSPWRYRR----GSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRR-RGGFFPLSESS 365
           T SPWRYRR    GSFWSKRPSPF SL K RVFS RYYRGMKSPFFRR RGGFFPLSESS
Sbjct: 325 TASPWRYRRAIGSGSFWSKRPSPFSSLTKPRVFSSRYYRGMKSPFFRRTRGGFFPLSESS 384

Query: 366 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 420
            R+S G GG SSRRSKS  SPMF+R+S +GGGG   FSSSRLR GDPEALLSP+R++RR
Sbjct: 385 ARYSTGGGGSSSRRSKSFASPMFMRTSASGGGG--VFSSSRLRSGDPEALLSPDRYHRR 415

[Close]

BLAST of CSPI02G11850.1 vs. TrEMBL
Match: B9HRT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s11310g PE=4 SV=2)

HSP 1 Score: 486.5 bits (1251), Expect = 3.3e-134
Identity = 294/445 (66.07%), Postives = 334/445 (75.06%), Query Frame = 1


Query: 3   TSPSPSPSPSPSPSPSPSPSPSTSSSSAAAA---NFPPPSSLQPAKLPVDFSPPLIAMVV 62
           T+PSPSPSP    + +PSP+P+ SS+  A A      PPS    +KLPVDFSP LIAMVV
Sbjct: 4   TTPSPSPSPHHHHTWAPSPTPTISSTPRATAPSYQSSPPSPSPTSKLPVDFSPTLIAMVV 63

Query: 63  VIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSL 122
           V+A AFL +TYSRLISR L+  I        RRWRRWRRRRR   R Y PSS+GG LDS 
Sbjct: 64  VVAAAFLTITYSRLISRSLLRVI--------RRWRRWRRRRR---RRYPPSSNGG-LDSP 123

Query: 123 P--YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRD------RECAVCLLEFE 182
           P  +DSP      + FHV+SPYGLD++VIKTIPLS+YT K+ +      ++CAVCLLEFE
Sbjct: 124 PPLFDSP------EGFHVYSPYGLDDAVIKTIPLSLYTTKNSNSFHKQIKDCAVCLLEFE 183

Query: 183 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTI 242
           DD+YVRTLP+CSHAFHVDCID+WLRSHANCPLCRA +FR ESPF PVMAARIRPSLD+TI
Sbjct: 184 DDEYVRTLPVCSHAFHVDCIDIWLRSHANCPLCRAGIFRAESPFIPVMAARIRPSLDETI 243

Query: 243 LRSII--LEPLAEGP---PTPNRDSYHATESEITPCIDEPR---------NSNSVEDQMN 302
           LRS +  LEP+ + P    +   D+  AT +EITPC +EP          N+NS ED+ N
Sbjct: 244 LRSTLLPLEPIIQSPLRTYSAVADTATATVTEITPCPEEPSPRRHSMNNFNTNS-EDRFN 303

Query: 303 GRD-FLLKRSYSFGFERSLASERM-ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFS 362
           GRD F LKRSYSFGFERSLASERM ++EPAT SPWR+RRG FWSKRPSPFGS+ KARVFS
Sbjct: 304 GRDHFFLKRSYSFGFERSLASERMLVMEPATASPWRFRRGVFWSKRPSPFGSISKARVFS 363

Query: 363 FRYYRGMKSPFFRRRG-GFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGA 420
           FR+YRGMKSPFFRRRG GFFPLSE       G GGGSSRR KSM SP FLRSSV  G   
Sbjct: 364 FRHYRGMKSPFFRRRGSGFFPLSERFSTVGGGGGGGSSRRCKSMASPQFLRSSV--GSSM 423

[Close]

BLAST of CSPI02G11850.1 vs. TAIR10
Match: AT3G18930.1 (AT3G18930.1 RING/U-box superfamily protein)

HSP 1 Score: 332.4 bits (851), Expect = 4.0e-91
Identity = 228/438 (52.05%), Postives = 273/438 (62.33%), Query Frame = 1


Query: 11  PSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTY 70
           P  S   SPSPSPS+  S    +    P        P++FSPPLIAMVVV+A AFL VTY
Sbjct: 7   PPRSGDNSPSPSPSSGISEEILSRSSDP--------PLEFSPPLIAMVVVLAAAFLFVTY 66

Query: 71  SRLISRHLIPPILHLLRLHRRRWRRWR-RRRRLAARSYIPSSSGGDLDSLPYDSPFFEPT 130
           SRLISR  + P+        RR+RRWR RRRRL   S   S+S    D   + SPF    
Sbjct: 67  SRLISRRFLSPLF-------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF-SPF---P 126

Query: 131 TDAFHV--FSPYGLDESVIKTIPLSVY-------------TAKSRDRECAVCLLEFEDDD 190
            D+FH   +SPYGLD+SVIKT+PL +Y             T+ +  R+CAVCLLEFE+ D
Sbjct: 127 FDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGD 186

Query: 191 YVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRPSLD 250
           YVRTLP+C HAFH++CID WLRSH NCPLCR      A V  P SPF P+MA RIRPSLD
Sbjct: 187 YVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLD 246

Query: 251 DTILRSIILEPLAEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMN---GRDFLLKR 310
           D    +II+     G  TP+R +++   ++ T   ++     SVE+Q +    R   LKR
Sbjct: 247 DEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRELKR 306

Query: 311 SYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRGMKS 370
           SYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR  KS
Sbjct: 307 SYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRSTKS 366

Query: 371 PFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSR 420
           PFFRRR   G F+P+SE          G SSRR+KSMTSPMF R+        A  SSSR
Sbjct: 367 PFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPMFFRT--------APHSSSR 404

[Close]

BLAST of CSPI02G11850.1 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-19
Identity = 78/261 (29.89%), Postives = 124/261 (47.51%), Query Frame = 1


Query: 54  LIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSG 113
           +++ +V++    +++ +  L +R       +LLR  RR  RR  R RR     +      
Sbjct: 31  MLSAIVILFFVVILMVFLHLYARW------YLLRARRRHLRRRSRNRRATMVFFTA---- 90

Query: 114 GDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDR--ECAVCLLEFE 173
                        +P+T A  V +  GLD +VIK++P+  ++ ++     ECAVCL EFE
Sbjct: 91  -------------DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFE 150

Query: 174 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSL---- 233
           + +  R LP C H FHVDCID+W  SH+ CPLCR++V    +      AAR R  +    
Sbjct: 151 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVD 210

Query: 234 DDTILRSIILEP-----LAEGPPTPNRDSYHATESEITP-CIDEPRNS-NSVEDQMNGRD 293
            D +L   ++EP     L + P           +S   P  I+ PR + +  ED++  RD
Sbjct: 211 SDPVL---VIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRD 264

Query: 294 FLLKRSYSFGFERSLASERMI 302
               +S+     R L+  RM+
Sbjct: 271 SPASQSFRSPMSRMLSFTRML 264

[Close]

BLAST of CSPI02G11850.1 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 4.1e-19
Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 35  FPPPSSL----QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHR 94
           FPPP S     +      DFSP LIA++ ++A+AF++V+Y  LIS++           HR
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYC----------HR 96

Query: 95  RRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIP 154
           RR          AA + I S       +   ++    P           GLDES+IK+I 
Sbjct: 97  RRHNS--SSTSAAAINRISSDYTWQGTNNNNNNGATNPN-QTIGGGGGDGLDESLIKSI- 156

Query: 155 LSVYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR 209
            +VY  +  D      +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCR
Sbjct: 157 -TVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 204

[Close]

BLAST of CSPI02G11850.1 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-18
Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1


Query: 36  PPPSSL---QPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRR 95
           PPPS       +     FSP LIA++ ++ +A ++V+Y  LIS++           HR  
Sbjct: 37  PPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYC----------HRHH 96

Query: 96  WRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLS 155
                             +S  +  +L ++   F  +T         GL+ES+IK+I  +
Sbjct: 97  -----------------QTSSSETLNLNHNGEGFFSSTQRISTNGD-GLNESMIKSI--T 156

Query: 156 VYTAKSRD-----RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAV 215
           VY  KS D      +C+VCL EFE+++ +R LP C+HAFH+ CID WL+SH+NCPLCRA 
Sbjct: 157 VYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAF 197

Query: 216 VFRPESPFTPV 219
           V    +P   V
Sbjct: 217 VTGVNNPTASV 197

[Close]

BLAST of CSPI02G11850.1 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-18
Identity = 75/220 (34.09%), Postives = 107/220 (48.64%), Query Frame = 1


Query: 54  LIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSG 113
           ++A V+++  A +++      +R L           RR+ RR RRR     RS   +   
Sbjct: 29  MLASVIILFVAVILILCFHSYARWLF----------RRQNRRIRRRISAHLRSLAAAR-- 88

Query: 114 GDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRD---RECAVCLLEF 173
                        +PT  +  + SP  LD +V++ IP+ VY+ K+ +    EC+VCL EF
Sbjct: 89  -------------DPTQSSSSL-SP--LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEF 148

Query: 174 EDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFT-PVMAARIRPS--- 233
           E+DD  R LP C H FHVDCID W RS ++CPLCRA V +P  P T P   A + PS   
Sbjct: 149 EEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-QPAQPVTEPEPVAAVFPSVKP 208

Query: 234 LDDTILRSIILEPLAEGPPTPNRDSYHATESEITPCIDEP 267
           ++DT   S      +E   TP+  S       +  C  EP
Sbjct: 209 IEDTEAGSSSSSDESES-STPSSSSGSPVRFPMEACEREP 218

[Close]

BLAST of CSPI02G11850.1 vs. NCBI nr
Match: gi|778669217|ref|XP_004145402.2| (PREDICTED: RING-H2 finger protein ATL65 [Cucumis sativus])

HSP 1 Score: 796.6 bits (2056), Expect = 2.1e-227
Identity = 413/419 (98.57%), Postives = 414/419 (98.81%), Query Frame = 1


Query: 1   MPTSPSPSPSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV 60
           MPT  SPSPSPSPSPSPSPS S S+SSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV
Sbjct: 1   MPT--SPSPSPSPSPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV 60

Query: 61  IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP 120
           IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP
Sbjct: 61  IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP 120

Query: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180
           YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP
Sbjct: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180

Query: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 240
           ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL
Sbjct: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 240

Query: 241 AEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300
           AEGPP PNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM
Sbjct: 241 AEGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300

Query: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360
           ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS
Sbjct: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360

Query: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 420
           WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of CSPI02G11850.1 vs. NCBI nr
Match: gi|659118674|ref|XP_008459244.1| (PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo])

HSP 1 Score: 764.6 bits (1973), Expect = 8.9e-218
Identity = 397/421 (94.30%), Postives = 401/421 (95.25%), Query Frame = 1


Query: 1   MPTSPSPSPSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVV 60
           MPTSPSPSPS SP            S+S+AAAANFPPPSSLQ AKLPVDFSPPLIAMVVV
Sbjct: 1   MPTSPSPSPSLSP------------STSAAAAANFPPPSSLQSAKLPVDFSPPLIAMVVV 60

Query: 61  IATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLP 120
           IATAFLIVTYSRLISRHL+PPILHLLRLHRRRWRRWRRRRR AARSYIPSSSGGDLDSLP
Sbjct: 61  IATAFLIVTYSRLISRHLVPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDLDSLP 120

Query: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180
           YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP
Sbjct: 121 YDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLP 180

Query: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPL 240
           ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSI+LEPL
Sbjct: 181 ICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPL 240

Query: 241 AEGPPTPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300
           AEGP  PNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM
Sbjct: 241 AEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERM 300

Query: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360
           ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS
Sbjct: 301 ILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESS 360

Query: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVT--GGGGAAAFSSSRLRCGDPEALLSPERFNR 420
           WRFSNGVGGGSSRRSKSMTSPMFLRSSVT  GGGG AAFSSSRLRCGDPEALLSPERFNR
Sbjct: 361 WRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGGGGAAFSSSRLRCGDPEALLSPERFNR 409

[Close]

BLAST of CSPI02G11850.1 vs. NCBI nr
Match: gi|1009165032|ref|XP_015900821.1| (PREDICTED: RING-H2 finger protein ATL65-like [Ziziphus jujuba])

HSP 1 Score: 534.3 bits (1375), Expect = 2.0e-148
Identity = 305/427 (71.43%), Postives = 343/427 (80.33%), Query Frame = 1


Query: 11  PSPSPSPSPSPSPSTSSSSAAAANFPPP-----SSLQPAKLPVDFSPPLIAMVVVIATAF 70
           PS +P+P+P+   +  ++   AAN P P     SS  P+KLPVDFSPPLIAMVVV+ATAF
Sbjct: 24  PSLAPAPAPTTRTAIITTILPAANGPTPALTQSSSPPPSKLPVDFSPPLIAMVVVVATAF 83

Query: 71  LIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPF 130
           L+VTYSRLISRH+IPP++  LR       RWRRRRR     ++PSS+G DLDSLPYDSPF
Sbjct: 84  LVVTYSRLISRHVIPPVIQFLR-------RWRRRRR----RHLPSSAG-DLDSLPYDSPF 143

Query: 131 FEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSR--DRECAVCLLEFEDDDYVRTLPICS 190
              T+D FHVFSPYGLD+SVIKTIPLS+YT K+R   R+CAVCL+EFEDDDYVRTLP+CS
Sbjct: 144 --ETSDGFHVFSPYGLDDSVIKTIPLSLYTTKNRLGSRDCAVCLIEFEDDDYVRTLPVCS 203

Query: 191 HAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEG 250
           HAFHVDCID+WLRSHANCPLCRA +FRPESPF PVMAARIRPSLDD +LRSI LEPL E 
Sbjct: 204 HAFHVDCIDMWLRSHANCPLCRAGIFRPESPFVPVMAARIRPSLDDAVLRSIALEPLNE- 263

Query: 251 PPTPNRDSYHATESEITPCIDE--PRNSN--------SVEDQMNGRDFLLKRSYSFGFER 310
              P RDS  +T +EITPC++E  PR +N        + ED++NGRDFLLKRSYSFGFER
Sbjct: 264 --VPARDSV-STVTEITPCVEESSPRRNNYSYIDNFHNSEDRINGRDFLLKRSYSFGFER 323

Query: 311 SLASER-MILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGG 370
           S  S+R M++EPATTSPWRYRRGSFWSKRPSPFGSL K RVFSFRYYRGMKSPFFRRR G
Sbjct: 324 SSISKRMMVMEPATTSPWRYRRGSFWSKRPSPFGSLSKPRVFSFRYYRGMKSPFFRRR-G 383

Query: 371 FFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLS 420
           FFPLSESS RFS   GGGSSRRSKSMTSPMF+R S      AA FSSSRLRCGDPEALLS
Sbjct: 384 FFPLSESSARFSG--GGGSSRRSKSMTSPMFMRPSPL--ASAAVFSSSRLRCGDPEALLS 427

[Close]

BLAST of CSPI02G11850.1 vs. NCBI nr
Match: gi|703097911|ref|XP_010096241.1| (RING-H2 finger protein ATL65 [Morus notabilis])

HSP 1 Score: 528.9 bits (1361), Expect = 8.3e-147
Identity = 317/463 (68.47%), Postives = 352/463 (76.03%), Query Frame = 1


Query: 1   MPTSPSPSPSPSPSP----------SPSPSPSP-----------------STSSSSAAAA 60
           M  SPSPSPSPSPSP          SP+PSPSP                 ST   S++++
Sbjct: 2   MTLSPSPSPSPSPSPFTGFDWWRAGSPNPSPSPVPAQPSSQAVITGPTSASTLDQSSSSS 61

Query: 61  NFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRW 120
           + PPPS     KLPVDFSPPLIAMVVV+ATAFLIVTYSRLISRH+IPP L +LR      
Sbjct: 62  SSPPPS-----KLPVDFSPPLIAMVVVVATAFLIVTYSRLISRHVIPPFLRILR------ 121

Query: 121 RRWRRRRRLAARSYIPSSSGGDLDSLPY-DSPFFEPTTDAFHVFSPYGLDESVIKTIPLS 180
            RWR+RRR  +RSY+PSSSG DLDSLPY DSPF    +D FHV SPYGLD+SVIKTIPLS
Sbjct: 122 -RWRQRRR-RSRSYLPSSSG-DLDSLPYYDSPF--DASDGFHVLSPYGLDDSVIKTIPLS 181

Query: 181 VYT-AKSRD--------RECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPL 240
           +YT AK  D        R+CAVCL+EF+DDDYVRTLP+CSHAFHVDCID+WLRSHANCPL
Sbjct: 182 IYTTAKGGDGSAFRLASRDCAVCLIEFQDDDYVRTLPVCSHAFHVDCIDMWLRSHANCPL 241

Query: 241 CRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEG-PPTPNRDSYHA----TESE 300
           CRA +FRPESPF P+MAARIRPSLDD +LRS+ LEPLAE   PT    +  A    T +E
Sbjct: 242 CRAGIFRPESPFIPLMAARIRPSLDDAVLRSMALEPLAEAIAPTAAAAASSAESASTVAE 301

Query: 301 ITPCID-EPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASER-MILEPATTSPWRYRRGS 360
           ITPC++ E  N  + ED++ GRDFLLKRSYSFGFERS ASER M++EPAT SPWRYRRGS
Sbjct: 302 ITPCVETEISNYRNSEDRIAGRDFLLKRSYSFGFERSAASERMMVMEPATASPWRYRRGS 361

Query: 361 FWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSK 420
           FWSKRPSPFGSL K RVFSFRYYRGMKSPFFRR  GFFPLSESS RFS   GGGSSRR+K
Sbjct: 362 FWSKRPSPFGSLSKPRVFSFRYYRGMKSPFFRRSRGFFPLSESSARFSG--GGGSSRRTK 421

[Close]

BLAST of CSPI02G11850.1 vs. NCBI nr
Match: gi|470148797|ref|XP_004309937.1| (PREDICTED: RING-H2 finger protein ATL65 [Fragaria vesca subsp. vesca])

HSP 1 Score: 506.1 bits (1302), Expect = 5.7e-140
Identity = 299/420 (71.19%), Postives = 338/420 (80.48%), Query Frame = 1


Query: 9   PSPSPSPSPSPSPSPSTSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIV 68
           P+ SPSPSP+PS + ST+ +   A++  PPS     KLP+DFSPPLIAMVVV+ATAFLIV
Sbjct: 3   PAASPSPSPAPSSTFSTTPTLLHASSSSPPS-----KLPIDFSPPLIAMVVVVATAFLIV 62

Query: 69  TYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYDSPFFEP 128
           TYSRL+SRH+IPP++       R  R WRRRRR   RSY+PSS G DLDS PYDS  F  
Sbjct: 63  TYSRLLSRHVIPPLI-------RFSRHWRRRRR---RSYLPSSIG-DLDSPPYDSSSF-- 122

Query: 129 TTDAFHVFSPYGLDESVIKTIPLSVYTAKS--RDRECAVCLLEFEDDDYVRTLPICSHAF 188
             DAFHVFSPYGLDESVIKTIPLS+YTAK+  R ++CAVCL+EFEDD+YVRTLP+CSHAF
Sbjct: 123 --DAFHVFSPYGLDESVIKTIPLSLYTAKTGLRSKDCAVCLIEFEDDEYVRTLPVCSHAF 182

Query: 189 HVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILEPLAEGPPT 248
           HVDCID+WLRSHANCPLCRA +FRPESPF P+MAARIRPSLDD +LR++ LEPLAE PP 
Sbjct: 183 HVDCIDMWLRSHANCPLCRAGIFRPESPFIPLMAARIRPSLDDALLRTMALEPLAETPP- 242

Query: 249 PNRDSYHATESEITPCIDE--PRNSNSV-EDQMNGRDFLLKRSYSFGFERSLASER-MIL 308
             R+S  A   EITPC +E  PR + S  ED++NG DF+LKRS+SFGFERS ASER M+ 
Sbjct: 243 --RESVTA---EITPCAEEQSPRRTFSYWEDRLNGGDFVLKRSHSFGFERSSASERMMVT 302

Query: 309 EPATTSPWRYRR-GSFWSKRPSPFGSLPKARVFSFRYYRG--MKSPFFRRRGGFFPLSES 368
           EP T SPWRYRR GSFWSKRPSPFGSL K RVFSFR +RG  MKSPFFRR+ GFFPLSES
Sbjct: 303 EPTTASPWRYRRGGSFWSKRPSPFGSLTKPRVFSFRSHRGMNMKSPFFRRK-GFFPLSES 362

Query: 369 SWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 420
           S RFS   GGGSSRR+KSMTSPMF+RSS      AAAFSSSRLRCGDPEALLSPERFNRR
Sbjct: 363 SARFS--TGGGSSRRTKSMTSPMFMRSSAL---TAAAFSSSRLRCGDPEALLSPERFNRR 390

The following BLAST results are available for this feature:

BLAST of CSPI02G11850.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL65_ARATH	7.1e-90	52.05	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2 SV=2	[more]
ATL2_ARATH	4.3e-18	29.89	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2	[more]
ATL41_ORYSJ	7.3e-18	36.46	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04...	[more]
ATL51_ARATH	7.3e-18	37.70	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2	[more]
ATL52_ARATH	2.8e-17	34.55	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1	[more]

BLAST of CSPI02G11850.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIL3_CUCSA	1.5e-227	98.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238760 PE=4 SV=1	[more]
W9R1C1_9ROSA	5.8e-147	68.47	RING-H2 finger protein ATL65 OS=Morus notabilis GN=L484_026978 PE=4 SV=1	[more]
F6HQI8_VITVI	8.6e-135	66.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01890 PE=4 SV=...	[more]
M1CCZ2_SOLTU	2.5e-134	67.54	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025175 PE=4 SV=1	[more]
B9HRT7_POPTR	3.3e-134	66.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s11310g PE=4 SV=2	[more]

BLAST of CSPI02G11850.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18930.1	4.0e-91	52.05	RING/U-box superfamily protein	[more]
AT3G16720.1	2.4e-19	29.89	TOXICOS EN LEVADURA 2	[more]
AT3G03550.1	4.1e-19	37.70	RING/U-box superfamily protein	[more]
AT5G17600.1	1.6e-18	34.55	RING/U-box superfamily protein	[more]
AT3G62690.1	2.0e-18	34.09	AtL5	[more]

BLAST of CSPI02G11850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669217\|ref\|XP_004145402.2\|	2.1e-227	98.57	PREDICTED: RING-H2 finger protein ATL65 [Cucumis sativus]	[more]
gi\|659118674\|ref\|XP_008459244.1\|	8.9e-218	94.30	PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo]	[more]
gi\|1009165032\|ref\|XP_015900821.1\|	2.0e-148	71.43	PREDICTED: RING-H2 finger protein ATL65-like [Ziziphus jujuba]	[more]
gi\|703097911\|ref\|XP_010096241.1\|	8.3e-147	68.47	RING-H2 finger protein ATL65 [Morus notabilis]	[more]
gi\|470148797\|ref\|XP_004309937.1\|	5.7e-140	71.19	PREDICTED: RING-H2 finger protein ATL65 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI02G11850	CSPI02G11850	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI02G11850.1	CSPI02G11850.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G11850.1.utr3p1	CSPI02G11850.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G11850.1.cds1	CSPI02G11850.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G11850.1.utr5p1	CSPI02G11850.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 162..205 score: 2.9
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 163..204 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 163..205 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 159..208 score: 1.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 127..225 score: 7.3E-82coord: 7..26 score: 7.3E-82coord: 50..99 score: 7.3
None	No IPR available	PANTHER	PTHR14155:SF185	RING-H2 FINGER PROTEIN ATL65	coord: 127..225 score: 7.3E-82coord: 50..99 score: 7.3E-82coord: 7..26 score: 7.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 159..211 score: 4.29