CSPI02G03800.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGACCACATCTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTACGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTTGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTGTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA ATGCAGACCACATCTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTACGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTTGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTGTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA ATGCAGACCACATCTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTACGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTTGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTGTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA
BLAST of CSPI02G03800.1 vs. TrEMBL
Match: A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 5.7e-117 Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. TrEMBL
Match: Q84KA4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-108 Identity = 206/225 (91.56%), Postives = 213/225 (94.67%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. TrEMBL
Match: Q6GX33_CUCME (Ctp (Fragment) OS=Cucumis melo GN=Ctp PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.9e-33 Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. TrEMBL
Match: W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002442 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.9e-33 Identity = 89/215 (41.40%), Postives = 131/215 (60.93%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. TrEMBL
Match: M5WN09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021895mg PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32 Identity = 97/230 (42.17%), Postives = 139/230 (60.43%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. TAIR10
Match: AT5G27440.1 (AT5G27440.1 unknown protein) HSP 1 Score: 101.7 bits (252), Expect = 6.2e-22 Identity = 61/150 (40.67%), Postives = 92/150 (61.33%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. NCBI nr
Match: gi|449443183|ref|XP_004139360.1| (PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 8.2e-117 Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. NCBI nr
Match: gi|659070394|ref|XP_008454859.1| (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]) HSP 1 Score: 402.9 bits (1034), Expect = 3.7e-109 Identity = 207/225 (92.00%), Postives = 214/225 (95.11%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. NCBI nr
Match: gi|28558787|gb|AAO45758.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 399.8 bits (1026), Expect = 3.1e-108 Identity = 206/225 (91.56%), Postives = 213/225 (94.67%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. NCBI nr
Match: gi|1009117214|ref|XP_015875196.1| (PREDICTED: uncharacterized protein LOC107412014 [Ziziphus jujuba]) HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39 Identity = 107/220 (48.64%), Postives = 142/220 (64.55%), Query Frame = 1
BLAST of CSPI02G03800.1 vs. NCBI nr
Match: gi|645222234|ref|XP_008246494.1| (PREDICTED: uncharacterized protein LOC103344659 [Prunus mume]) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33 Identity = 99/230 (43.04%), Postives = 140/230 (60.87%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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