CSPI02G03770.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGATTTCTTTCATCTGGTACTGATTGCGTTTGATCTTCGATTCGGCTGATTTCCCTGTGCCATTCATCGTTCATTCCTTTCCAATTAGGTAAAATTATGGTGGAATTTGAGTGGAACTCAATGCCTTCCTTTTTTTCCTTTGACCTTATCATGATTTATGACTCTGATTGTTGAATTCAAATGGCACTGGCTTGATAATTGGATATAGAACCTTTTCATATTAGGGCCAGTTTATAACATCTTCTTCGCACTTTCAATGAAGAAGCTTTTAGCTGGTTTGGCTTTATTAGATTAATTGTTTTGTATTTGGCAAATATTGTTTTGGAATTTCTTGGTTAACTTTATTGCTCTGTTCTTTGTATGCCAGCTCAAGCTGACCCCTAGATTTTTTTTTTCCCTTCATTTTTTGGAAGTAAGGTTTTTCCTTTGTCCCAAAAAGGGAAGAAAACTGCTAGTATGGATGAATGCTGATGCTAATTATACTTTTAGCTTGGTGTAGGTTGAAATTTTAGAATTTGTTAGTGGTTGTGGAGATTGTGAGAGAAAAGAAATTGGTTGCAGTTTGTAAAATGGTAGTTGGGTTTGTACATCCTACATAAGTCGTCATTTCAGAAGAAAGACGAGTTATGAACTTTCTATTATTTAGTTTTATCATGGCCTTTGTGGTAACAACAGATCTGTAGTCATTTTACTACAACTAATGTGGGGGTGCGGATCTGAACTTTCAAACTGGATGACTTAACCATTGGGCTACTCTCGTGTTCGCATAGCTCTAAGTGATAGAGAATTAGCTTCAGGCAAATGTGGGGGAAGGGATGCCAACAAATGTGAGGAAGGATTATATACCAATCTGTAATTTTAAAATGGCAGTTTGATGGTGTTTTCTTCTAACATTACTTGTTTCTGGCAAATTATTTGATGACCGCTTACTTCTGCTGGTGACATCCATGTGTCCAATTCAAGTTTCTGCCTGGTTTATCAATTATAATTTAGGGTATCCACTATCGTAAAAAAGTCTTATCTACCTAATAATTTTGTATTAACGTTATAAAGCTAGCGCGTTTTAATTTTATTGTACCTGTCTTTCACATTGCCTTTTGGTTTTCTGTTGATAGAAGCAAATTTATGTTCAAAGTTAAGAAAGAAGCGATGTTTAAATTTTTAGGTAGCCTTTTTACTGTGTGTAAATATGAATCGATGCAGGTGAGCATGTGGGAAGGGAGAGACATGAAAGGGGTATTCTTTCCAGATGATTGTTATCTATTTTGCTAGCATTTATTTAATCCAGACTTTTTCTCTGTCACTTCAATTAGCAACTTTTTCTTGCTTGTAGGTTTCTATTTGGCAGCTGCTTCTGCAATGGATGACAGCTCTCCCCAGAACTCAAAATCTCCTATTCCTGTTGTGCCAACTAAAGCACCAGAGAATGACCAGCATTTTCTATTGTACTTCATCGCCGGTATCTACTTTGGGCCTAACCTCAAAGGCGAAACAGCACCAAAGTCTGCTCTACAGAGACTAGCTGAGAAATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCTCATGAAGATGGTGGAAGTAGAGCGCATATTTTATTATGTCTTGAGGAAGGCTGATGAATCTCTTATTATGAAGATGTCTTTATTACATCAGTTCTTCCAAGGCAAATTTCCCTCACAAGGACGAGATACTGGTTCTCCTCAGTTTCCTGATCTTTTTCCACTTGAACTACATCCTCATACTCGGTCCAAGAATTGGTATAGGTATATCGAGAGCCTTTTGTTTATCAACAACCCAGAAGTCTACTACCTGAATCCGGAAGATGTTGAAAGGTTTAAGAGGCTAACAGGACTGAATGACTTCTTTTTGGATAGAGATGCAGCCAGATCACACAATTCGTCAGCTCGTAAAGCTTCACTCAATGTTGAAGCTACAGAGAACAGATCGAATAAAGAGTTCTCTCCTCTTAAGGATGATCAGCAACATGACTTAGTTACTTCACCTGTTCGTAGTGTTCCATATAATGGTAATTTGACACCTCCACATACCAATTCCGACTCTAATCTTTTGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCGGACAACCATCTGAAGAAGATTGGGCGAATCTAGTAGCTGCTACAAATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGAAACGTTGGACCAATAATTGGATCAATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCTCTTCCAGGCGTTAAAAGAGATCCATGTAAGTTGCTTTTGTTTAATATATTTCAATGATCCGAATCTTACATATTAGTCTTTTTTAAAAAAGTAAACAAAACTAATGCTCATAGATACAAAAAATAGACTAGCAACTGAAACTTAAAAACAAGAAATCATGAAATACAAAGAAAAAGTTCGAAAACTAGAAGCTGAATCTATTACTGCAACCACACAGATTATCTCAAGAGTATCCTGAGTTATAGTTATATATTTGTATACACTAAAAAGGAAAGGATATTAGTAAGAACAATATAGTTTAGCCATGATGATATTGGTTGATGGATGGGATGAATGTCTCTTTAGTTTGCCTAGCTATCCTTGTGTTCAATATCTACCATATTATGACCATTTAGGCAACATATACCTACTGGAGTTAGAGACACAATGGAGATCTTTTTAAATCGAAACACTAAATAGACACAACTATCTGAATTAACTAAATATATATATATATATATAATACTAGTCAGTTTTTCAGTGGTTTTTTTTGTCATAAATTGATGAGAGTTTTGATTCATTGATCAGGTGGATTTAACTGTGAAGTTGAAAAGGATGGGAGAGTGGTGATAAAGGGAGTTACAACAACAGGTGAGAGAACAGTGAAAAAACATTCTCAAGTGTTTGAAATGGTAACTCACAACCTGTGTCCACCAGGAGAGTTTTCACTTTCATTTCAACTACCTGGCCCTGTTGATCCTCAACATTTCTTAGCTAACTTTGACATTGCTGGGATTCTTGAAGGTGTTGTGATGAAAGATTTACAGTCATGA ATGGATGACAGCTCTCCCCAGAACTCAAAATCTCCTATTCCTGTTGTGCCAACTAAAGCACCAGAGAATGACCAGCATTTTCTATTGTACTTCATCGCCGGTATCTACTTTGGGCCTAACCTCAAAGGCGAAACAGCACCAAAGTCTGCTCTACAGAGACTAGCTGAGAAATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCTCATGAAGATGGTGGAAGTAGAGCGCATATTTTATTATGTCTTGAGGAAGGCTGATGAATCTCTTATTATGAAGATGTCTTTATTACATCAGTTCTTCCAAGGCAAATTTCCCTCACAAGGACGAGATACTGGTTCTCCTCAGTTTCCTGATCTTTTTCCACTTGAACTACATCCTCATACTCGGTCCAAGAATTGGTATAGGTATATCGAGAGCCTTTTGTTTATCAACAACCCAGAAGTCTACTACCTGAATCCGGAAGATGTTGAAAGGTTTAAGAGGCTAACAGGACTGAATGACTTCTTTTTGGATAGAGATGCAGCCAGATCACACAATTCGTCAGCTCGTAAAGCTTCACTCAATGTTGAAGCTACAGAGAACAGATCGAATAAAGAGTTCTCTCCTCTTAAGGATGATCAGCAACATGACTTAGTTACTTCACCTGTTCGTAGTGTTCCATATAATGGTAATTTGACACCTCCACATACCAATTCCGACTCTAATCTTTTGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCGGACAACCATCTGAAGAAGATTGGGCGAATCTAGTAGCTGCTACAAATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGAAACGTTGGACCAATAATTGGATCAATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCTCTTCCAGGCGTTAAAAGAGATCCATGTGGATTTAACTGTGAAGTTGAAAAGGATGGGAGAGTGGTGATAAAGGGAGTTACAACAACAGGTGAGAGAACAGTGAAAAAACATTCTCAAGTGTTTGAAATGGTAACTCACAACCTGTGTCCACCAGGAGAGTTTTCACTTTCATTTCAACTACCTGGCCCTGTTGATCCTCAACATTTCTTAGCTAACTTTGACATTGCTGGGATTCTTGAAGGTGTTGTGATGAAAGATTTACAGTCATGA ATGGATGACAGCTCTCCCCAGAACTCAAAATCTCCTATTCCTGTTGTGCCAACTAAAGCACCAGAGAATGACCAGCATTTTCTATTGTACTTCATCGCCGGTATCTACTTTGGGCCTAACCTCAAAGGCGAAACAGCACCAAAGTCTGCTCTACAGAGACTAGCTGAGAAATTGCCTCCCTATACTTCTGATCAACTTGCTGGATCTCTCATGAAGATGGTGGAAGTAGAGCGCATATTTTATTATGTCTTGAGGAAGGCTGATGAATCTCTTATTATGAAGATGTCTTTATTACATCAGTTCTTCCAAGGCAAATTTCCCTCACAAGGACGAGATACTGGTTCTCCTCAGTTTCCTGATCTTTTTCCACTTGAACTACATCCTCATACTCGGTCCAAGAATTGGTATAGGTATATCGAGAGCCTTTTGTTTATCAACAACCCAGAAGTCTACTACCTGAATCCGGAAGATGTTGAAAGGTTTAAGAGGCTAACAGGACTGAATGACTTCTTTTTGGATAGAGATGCAGCCAGATCACACAATTCGTCAGCTCGTAAAGCTTCACTCAATGTTGAAGCTACAGAGAACAGATCGAATAAAGAGTTCTCTCCTCTTAAGGATGATCAGCAACATGACTTAGTTACTTCACCTGTTCGTAGTGTTCCATATAATGGTAATTTGACACCTCCACATACCAATTCCGACTCTAATCTTTTGGAGAAGAAATTTGGTCCAGCAATGCTATTTCTTCCCGGACAACCATCTGAAGAAGATTGGGCGAATCTAGTAGCTGCTACAAATACAGGATTTGCATTGACTGGAACTGCAGCAATGGGAAACGTTGGACCAATAATTGGATCAATGGACATTGGAGAATGTGAAGACTCGTACTTGTTTCGTGTGTCTCTTCCAGGCGTTAAAAGAGATCCATGTGGATTTAACTGTGAAGTTGAAAAGGATGGGAGAGTGGTGATAAAGGGAGTTACAACAACAGGTGAGAGAACAGTGAAAAAACATTCTCAAGTGTTTGAAATGGTAACTCACAACCTGTGTCCACCAGGAGAGTTTTCACTTTCATTTCAACTACCTGGCCCTGTTGATCCTCAACATTTCTTAGCTAACTTTGACATTGCTGGGATTCTTGAAGGTGTTGTGATGAAAGATTTACAGTCATGA
BLAST of CSPI02G03770.1 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-50 Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37 Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.6e-30 Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TrEMBL
Match: A0A0A0LJJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021580 PE=4 SV=1) HSP 1 Score: 799.7 bits (2064), Expect = 1.6e-228 Identity = 390/391 (99.74%), Postives = 390/391 (99.74%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TrEMBL
Match: Q84KA7_CUCME (Heat-shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 770.0 bits (1987), Expect = 1.4e-219 Identity = 374/391 (95.65%), Postives = 384/391 (98.21%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TrEMBL
Match: M5W4S1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023477mg PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 2.0e-117 Identity = 222/398 (55.78%), Postives = 270/398 (67.84%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TrEMBL
Match: B9RF37_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431160 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 7.6e-109 Identity = 209/386 (54.15%), Postives = 261/386 (67.62%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TrEMBL
Match: A0A067JVH1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23367 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 4.3e-104 Identity = 205/396 (51.77%), Postives = 259/396 (65.40%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51 Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 159.1 bits (401), Expect = 5.7e-39 Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 135.2 bits (339), Expect = 8.8e-32 Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. NCBI nr
Match: gi|449442839|ref|XP_004139188.1| (PREDICTED: uncharacterized protein LOC101212060 [Cucumis sativus]) HSP 1 Score: 799.7 bits (2064), Expect = 2.3e-228 Identity = 390/391 (99.74%), Postives = 390/391 (99.74%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. NCBI nr
Match: gi|659070396|ref|XP_008454867.1| (PREDICTED: uncharacterized protein LOC103495173 [Cucumis melo]) HSP 1 Score: 772.3 bits (1993), Expect = 4.0e-220 Identity = 375/391 (95.91%), Postives = 385/391 (98.47%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. NCBI nr
Match: gi|28558784|gb|AAO45755.1| (heat-shock protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 770.0 bits (1987), Expect = 2.0e-219 Identity = 374/391 (95.65%), Postives = 384/391 (98.21%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. NCBI nr
Match: gi|1009117216|ref|XP_015875197.1| (PREDICTED: increased DNA methylation 2-like [Ziziphus jujuba]) HSP 1 Score: 445.3 bits (1144), Expect = 1.1e-121 Identity = 234/412 (56.80%), Postives = 288/412 (69.90%), Query Frame = 1
BLAST of CSPI02G03770.1 vs. NCBI nr
Match: gi|645278518|ref|XP_008244267.1| (PREDICTED: uncharacterized protein LOC103342424 [Prunus mume]) HSP 1 Score: 433.3 bits (1113), Expect = 4.4e-118 Identity = 223/398 (56.03%), Postives = 270/398 (67.84%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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