CSPI02G02620.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCATCATGCAAATTTTAATCTTTCAGAATTTGATCGATTTTCTCTCTTCTTTGCACATTTGTTGGAGAATTGTTTGATCTTGAGTCTTCAATTTCGAAGAATTGAATGGGGGAAGCTGCCGAATATTTCTCCAAAGATTTCCAATGGGATGATCTTCGTATTCGGGTTGAGAACGACCCGAATTTGCAATACCATTTGCTTCCATTTGAGCCCTCCAATTCCGTTCCGTCAGTTTCTCCAGAAGCCGATTCAAACGCATGGAGCCGCTTTCACCTCCGTCACTCCTCCGGCAAATTCTTCAAGGTTTTGATTCCGTTTAGTATTTTGAACGTTTTTGTATTCGTAGCAACCTAACTTAACTTTGCTGTTTCTCTTAGTTTGGTTGTGATTTGAGTATTTTATATTTGGGGTTCAGGAAAGGCGTTATTTGTTGAAGGAATTCCCTGAACTAGTTTCTTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACAGTTATTCCAATCTTGCGGTAACCTCCAACGTATTCTACTTTTCCTCTGCATTACTTCTTAGTCACGTTCATCAATTTTGTTTTGTTTTTTTTAGAAATTTAGTTGATAAGTCTGTTTGTGTTTGCATTGTGCTTGCTTATATGAGATATTATTCAAAAATATTATCGTTGAAATTAATTAGGAAGTAGAGAAAAAGCAGTGTCAGTTGGAGGATTCTTTTAGAACAGGAGACTAAAAAGACAACTGTTATTGAATGGGCTCTTAAAGTTCCCACATTTTCTATTTTGCTCTTTAAATTTCGCCAATGTTTCTATGTGATATGCTATTGTTGTTTAGGTTAGCTTTCATTCAGGGGTGAAACGGAACATCTTTACAAGGCGAAGACAAACATAATCCATATCCCTTCTTGATTTAATTATGTCAAGTTCAGTAGCTTGTTTTAGGGTCCTTAATGTAACCTTGTAATGTGTTCCATTTTCAATGAGTTAGGAGTGAGGTGCCACATTATAAGAGAGATAATTGATCCTTCACTTCCGTTTGAGATTTTGATTTTGCATGATCCGCCCTACTCTATGCAGGTTCTCCTTTGTATTATCGGTAGGATATATGCTCAGATCTGTATATCACCATATACCCTTCATATTTCGTTAGAAGTCCAAAATTCTCATTTAGATTGATGTTAATCTATTTCATTAATAAAGTTATAGCTGATGGAAGACAATGATGATAGCAGTGCCTAGGTTGAGCCATTTACTGAGGGTCTAGTCCATGGAAATGATGTGTATTCTATACATTTTTCGAACTCTGTTCAAGAGTTGAATCATAGATATTTCTTCATGAAACTTTATTGGGTGTTATGAATGCATCTTGTGGGAGAAAGTATATGAAATAGAACACAGCCTTTGCAATGTTTTACGGACATCCCAATAATTGCAATGCATTTGTATGGTCAAAGGTAGAATAAATTTGAACAATTAAATATGCCATTGAGTTGTAGATCTTATTGCTAGCTATTCGTTATCCTTACACACGATTACTTTCTTTGTAGCGGGAACGAGAACATCATCATCTATGCTTGTGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGACATTTTAAATGATGCTGGCTTTGCATCTTTAAAAGACCGATTCCATCCATTCTATTGTGACTTTTCTATTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCGGAGTTTTACTACTCCAGGTTGTTATTTTATCTATCTCTTTAGACTCATTAACATGCAAGATTATTGCTTTTCTTTACAATCTTATTCATCTTTCTCTACGTTTTCAGAGAATGATGGATCTCAGGCCACTGGTTCATTTGCACTAGAAGAAAGTGGATGTTGCATTGGTGGGGTTGATTTTATTACTTTGGTTCGTACCTCTTTTAGTATATTAATATAATTTTTAATTTTATCAAAGGCTTCAAATTTTGATTCCTAATTGTGGAACATTTTTTATTTCCAAAAAAAGAAGTAACAAAAATAAAAGCTAAAAGGCTCTAAGGCATGAATGGTGATGGTGTGCTTTCGAAAATCCTACATGTCCTGCAACTATTGTTTTGATATTGAACTAGATTCCAACTCTTTTGACCAACATCACTAAGGAAAAAACCAATAATGTATGGTGTAGCCTAGCACTAACAAACTTTTTTCAGTTTTAATGTCTTCTTGAATCTTGGTAATGACAGTTATAATGTTCTTTGGCTATTTCAGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCAATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTCTTATTTCGGGATTATGGTAATCGATTATGATCAGACCAATGATGACGTATTGGTTTGCTTTAAATTCTAAAGTAAACTTCCTTTTTCCAAGTTCTAATTTCCAG ATGGGGGAAGCTGCCGAATATTTCTCCAAAGATTTCCAATGGGATGATCTTCGTATTCGGGTTGAGAACGACCCGAATTTGCAATACCATTTGCTTCCATTTGAGCCCTCCAATTCCGTTCCGTCAGTTTCTCCAGAAGCCGATTCAAACGCATGGAGCCGCTTTCACCTCCGTCACTCCTCCGGCAAATTCTTCAAGGAAAGGCGTTATTTGTTGAAGGAATTCCCTGAACTAGTTTCTTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACAGTTATTCCAATCTTGCGCGGGAACGAGAACATCATCATCTATGCTTGTGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGACATTTTAAATGATGCTGGCTTTGCATCTTTAAAAGACCGATTCCATCCATTCTATTGTGACTTTTCTATTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCGGAGTTTTACTACTCCAGAGAATGATGGATCTCAGGCCACTGGTTCATTTGCACTAGAAGAAAGTGGATGTTGCATTGGTGGGGTTGATTTTATTACTTTGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCAATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTCTTATTTCGGGATTATGGTAATCGATTATGA ATGGGGGAAGCTGCCGAATATTTCTCCAAAGATTTCCAATGGGATGATCTTCGTATTCGGGTTGAGAACGACCCGAATTTGCAATACCATTTGCTTCCATTTGAGCCCTCCAATTCCGTTCCGTCAGTTTCTCCAGAAGCCGATTCAAACGCATGGAGCCGCTTTCACCTCCGTCACTCCTCCGGCAAATTCTTCAAGGAAAGGCGTTATTTGTTGAAGGAATTCCCTGAACTAGTTTCTTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACAGTTATTCCAATCTTGCGCGGGAACGAGAACATCATCATCTATGCTTGTGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGACATTTTAAATGATGCTGGCTTTGCATCTTTAAAAGACCGATTCCATCCATTCTATTGTGACTTTTCTATTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCGGAGTTTTACTACTCCAGAGAATGATGGATCTCAGGCCACTGGTTCATTTGCACTAGAAGAAAGTGGATGTTGCATTGGTGGGGTTGATTTTATTACTTTGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCAATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTCTTATTTCGGGATTATGGTAATCGATTATGA
BLAST of CSPI02G02620.2 vs. Swiss-Prot
Match: METL6_RAT (Methyltransferase-like protein 6 OS=Rattus norvegicus GN=Mettl6 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13 Identity = 64/202 (31.68%), Postives = 90/202 (44.55%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. Swiss-Prot
Match: METL_SCHPO (Uncharacterized methyltransferase-like protein SPBC21C3.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.07c PE=3 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12 Identity = 64/229 (27.95%), Postives = 104/229 (45.41%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. Swiss-Prot
Match: METL_DROME (Methyltransferase-like protein OS=Drosophila melanogaster GN=metl PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 55/192 (28.65%), Postives = 79/192 (41.15%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. Swiss-Prot
Match: YNVB_SCHPO (Uncharacterized methyltransferase C3H7.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.11 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10 Identity = 58/188 (30.85%), Postives = 84/188 (44.68%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. Swiss-Prot
Match: METL2_MOUSE (Methyltransferase-like protein 2 OS=Mus musculus GN=Mettl2 PE=2 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 45/154 (29.22%), Postives = 68/154 (44.16%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TrEMBL
Match: A0A0A0LG62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009600 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 1.6e-138 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TrEMBL
Match: V4VS91_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021195mg PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.0e-85 Identity = 155/236 (65.68%), Postives = 181/236 (76.69%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TrEMBL
Match: B9I5L8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04160g PE=4 SV=2) HSP 1 Score: 318.5 bits (815), Expect = 6.8e-84 Identity = 146/237 (61.60%), Postives = 187/237 (78.90%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TrEMBL
Match: A0A067JIB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23529 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 9.8e-83 Identity = 149/234 (63.68%), Postives = 181/234 (77.35%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TrEMBL
Match: W9RQS2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024537 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.1e-81 Identity = 147/238 (61.76%), Postives = 182/238 (76.47%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TAIR10
Match: AT1G54650.2 (AT1G54650.2 Methyltransferase family protein) HSP 1 Score: 264.6 bits (675), Expect = 5.9e-71 Identity = 136/235 (57.87%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. TAIR10
Match: AT2G26200.1 (AT2G26200.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 63.2 bits (152), Expect = 2.6e-10 Identity = 35/112 (31.25%), Postives = 55/112 (49.11%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. NCBI nr
Match: gi|778666401|ref|XP_011648734.1| (PREDICTED: methyltransferase-like protein 6 [Cucumis sativus]) HSP 1 Score: 500.0 bits (1286), Expect = 2.4e-138 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. NCBI nr
Match: gi|659070733|ref|XP_008456399.1| (PREDICTED: methyltransferase-like protein 6 [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 2.2e-136 Identity = 233/237 (98.31%), Postives = 235/237 (99.16%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. NCBI nr
Match: gi|1009117558|ref|XP_015875382.1| (PREDICTED: methyltransferase-like protein 6 [Ziziphus jujuba]) HSP 1 Score: 337.4 bits (864), Expect = 2.0e-89 Identity = 157/237 (66.24%), Postives = 188/237 (79.32%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. NCBI nr
Match: gi|694432853|ref|XP_009343759.1| (PREDICTED: methyltransferase-like protein 6 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 322.0 bits (824), Expect = 8.8e-85 Identity = 157/243 (64.61%), Postives = 191/243 (78.60%), Query Frame = 1
BLAST of CSPI02G02620.2 vs. NCBI nr
Match: gi|567900462|ref|XP_006442719.1| (hypothetical protein CICLE_v10021195mg [Citrus clementina]) HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84 Identity = 155/236 (65.68%), Postives = 181/236 (76.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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