CSPI02G01140.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAATTGTCATAAAAAAACTCGATGCCGTCAAAGAGGCAGTGAAATTTGGAGTTATGGGTTTCTCATCTTCATTACTCTTTTCCTCCCCTATTCTTCCCTGCACCCACTTCTTCTTCCTATAGATTTTCCTCTCTCTGAATCCCTTTCACCATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCTGTCAAGACCCAAGTCATCAGTTCCGGCTTTTTATGGGGTACTGGCGACATTGCTGCTCAATACATTACTCACTCCGCCACTAAAACCCATCTTCCAACTTCTGTGAGCATCAATCCCTTCATTTCCCTTTTCGCTTTTATAGTAATTTTATTGGGTTTTCTTTCTTGACTCCTTATTTGTGCTAAGGGGTTTTTGTTTTCATTGATCGGAGTTTTCTTGTTGACTTGATTCTTTTTCTGTTCTTGTCTTGTTTCTGTGTTAATTTCGGTTTGGAGCCATGGAATATGTATTTATCTTGTTTTTGCTAGTCCTAACCGATAATCTGCTTCTGTTGAGGCAAGAAATTACTGTTTATGTGATATTTTCTTTCGAGGAATCATAAGGGAAAGGAAAAGGGTTTTGTTCATGTGTTTCTTGATTGCATATTCAGGTCAATGGTATTTTGTTGCCTTCAGTGAATTTTTGAAGTCTCTTGATTAATTGGTTTTCTTGGGGTGCGGGATATCATTTTGTGTCTGAATGTATAGGAAGGATATTTGTTCTCAGTTTTTGGCAACTTTTTTAAAGGTAATATTTATGTGTACAATGTAGATTCTTCCTGTATTATAGTCTTTAGTTGAGTTTGATTTAGGTTTTGGAATAGTGAAATGTGTATTGGGCTAATTAAAGGCATTTTCACGTTCTTTGTATTGTTTAGTTAGATTATTTTTTGGTAGAAATTTGGATATTCTTAAATTACTTAGAAGTACCACTTTCAAGAGTTATCCAAAAATCACTATTCTTAAAAGCTAGTTTCAAATTTCATCCAATCTTTTCTCTTCTGAAGTAAGGAGTAGTCTGAGAGAATTTTACTTAGAACTACCGCAGATGCTGAATTTCACTCTTGGGGAACATCCCTTCAAGAAGGAGAGAAAAGCCCTCTAGATAAGGAACCACCTATCTCGGATTTCTTTTTTTATGATATATTTAATTTGGTTGTTTCTTGGTGCAAATATTCCTCCTTTTTCTTCTCTTTCGCTATTCTTCCCTCCTCTTCAATTGTAGGGGTCTTTTGTTATCCGTTTCATGGGGATCTTTTGTAATTCATCTATATATCCTTCTGCTGACCGTTGTGTTCTTCTGCTTCTCTTGCCCCTTTGAGGCCTACTGCCTCTTGCTAATGGTTGAACCTCATTCTTGAACATCCATCAAATAACAGTTTCTTAATTGTTAATCTTCTTGTCAGTTCGCTAACCACTTACCTGCTCGTAGTTCAAGTTTGGCGTGATTATCTTGACTATCAATTTTTTTAACGCTGCTCCATGTAAGTGTAAACTGGATATAATCCTTTTCTGACCATAGAGATGCCGTTTGCAGCTCTAGATCTGTAATCAAGTTTTTAAATCTGTGACTGAGATTACGCAATAGATACTAAAGCAGTCATCTATTTTTTGTTCTATTTTCATATTTTAGTTTTGCTCTTTTATTTCACCTCAACTGTCTCTGGTTTTTATCTTAAGTAGCTGCTACATGGTGCTCTTATATTGCCACTGAACTGATTCCTTTTTGTAGTCAGATGCTGTAGAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGTTTCGGTTTTGTTGGACCTGTCGGCCACATGTGGTTTGTTTCCTTTTATCTTTTCCTTTTCAACTTGCCATATCTATCATCTTTGTTACTTCAAGAATCGCTGATTCTGAACTTTGATTTTCAAGTATATGGGTGGATATTTGATATGTGGTCGCGTTATCTTTATTTTCCACTCATGTCTCCCTATATTTTCAGAAAGACAATATGGTTCTACTATATCTGTTATCTTCAATTATCATATTTTGTGAATGCATACATCGTTCCCCTTTTATCTTTTGTTTGCTTAAGCCCTTTTGAGTACACCATACTATTGCATACTATGTTGAAGGAATCAATAATATTACTTATTACACATAGTGTTATCTCAGACGGCTCAAGTTTTTAAAGGATAACTCAAGTTTTTAAAGGATAATGTATCTAAGTTTCTTAGTATATACCAATATTCATTGATGCTTTTGATAATTTTGGTTCCACGAGGCTTGGGGTACGATATTCTTAAATTGTGCAACTTGTGTTTGAGTTTATATAACCGTCGGCTTTAGGTTTAGAAACCTCAAATTTGGGACATGTTACTTAGGCTCAACTTATTAAATGGTTTAAATATAATTCACTCAATTCGTTAACATTAGGTCATATAAAGTTTTCCTTTGGATGTAAAGTACTATTCTTCATTGGAATGATTGATGTAAAATGCTTGTTTTCTACTCTTACATTATGTGTGCACCGAATCCTAAGACATTTGATCCTTTGACAGGTATGAAGGCTTGGACAGATTTATAAGGCTAAAACTTCAGCTACAGCCAAAATCAGCCAAATTTGTCGGGGCAAAACTGGCAATGGATGGTCTAATCTTTGGCCCAATCGATTTAGTTTTCTTCTTCAGTTATATGGGATTTGCCAATGGTAAAGATGTTGCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCCGCATTCATCTTGTCGGGTACAGTGTGGCCGATCATTCAGGTTGCGAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAATATGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACTTCTTTTAATCCTTTTAAAGATAGATAAGAGATTTTGAGACCTATCTTCTCAATCTCAGCCTTCCTTTTTTTCTCCCTTTTTTCGATTCATCACATTGGACTGAGGAATATGCTGATTTGTTCCCTTTATAATAGACTGTGAAGATATTTCTAAGCCACATTTGTGCAATCTCTTTGTGTGTTTCAATCATTCATCATGCCCTGTTTTAATGAAATACAGCCCATAGATTTACCTCTGCATTCTCAATTTTGACCCTTGTGTTTCTCTAGAGGAAGCA ATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCTGTCAAGACCCAAGTCATCAGTTCCGGCTTTTTATGGGGTACTGGCGACATTGCTGCTCAATACATTACTCACTCCGCCACTAAAACCCATCTTCCAACTTCTTCAGATGCTGTAGAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGTTTCGGTTTTGTTGGACCTGTCGGCCACATGTGGTATGAAGGCTTGGACAGATTTATAAGGCTAAAACTTCAGCTACAGCCAAAATCAGCCAAATTTGTCGGGGCAAAACTGGCAATGGATGGTCTAATCTTTGGCCCAATCGATTTAGTTTTCTTCTTCAGTTATATGGGATTTGCCAATGGTAAAGATGTTGCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCCGCATTCATCTTGTCGGGTACAGTGTGGCCGATCATTCAGGTTGCGAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAATATGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACTTCTTTTAATCCTTTTAAAGATAGATAA ATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCTGTCAAGACCCAAGTCATCAGTTCCGGCTTTTTATGGGGTACTGGCGACATTGCTGCTCAATACATTACTCACTCCGCCACTAAAACCCATCTTCCAACTTCTTCAGATGCTGTAGAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGTTTCGGTTTTGTTGGACCTGTCGGCCACATGTGGTATGAAGGCTTGGACAGATTTATAAGGCTAAAACTTCAGCTACAGCCAAAATCAGCCAAATTTGTCGGGGCAAAACTGGCAATGGATGGTCTAATCTTTGGCCCAATCGATTTAGTTTTCTTCTTCAGTTATATGGGATTTGCCAATGGTAAAGATGTTGCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCCGCATTCATCTTGTCGGGTACAGTGTGGCCGATCATTCAGGTTGCGAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAATATGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACTTCTTTTAATCCTTTTAAAGATAGATAA
BLAST of CSPI02G01140.1 vs. Swiss-Prot
Match: PX24B_DICDI (PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23 Identity = 59/196 (30.10%), Postives = 96/196 (48.98%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. Swiss-Prot
Match: MPV17_XENLA (Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2) HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20 Identity = 67/192 (34.90%), Postives = 95/192 (49.48%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. Swiss-Prot
Match: MPV17_BOVIN (Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19 Identity = 64/191 (33.51%), Postives = 91/191 (47.64%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. Swiss-Prot
Match: MPV17_RAT (Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19 Identity = 65/195 (33.33%), Postives = 90/195 (46.15%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. Swiss-Prot
Match: MPV17_HUMAN (Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19 Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TrEMBL
Match: A0A0A0LF15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004160 PE=3 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 3.5e-124 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TrEMBL
Match: A0A067KC03_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07253 PE=3 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.0e-95 Identity = 160/212 (75.47%), Postives = 177/212 (83.49%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TrEMBL
Match: A0A067ECE3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027783mg PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 7.5e-95 Identity = 160/213 (75.12%), Postives = 183/213 (85.92%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TrEMBL
Match: A0A067E1C9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027783mg PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 9.9e-95 Identity = 160/212 (75.47%), Postives = 182/212 (85.85%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TrEMBL
Match: V4TV37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009440mg PE=3 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.3e-94 Identity = 160/213 (75.12%), Postives = 183/213 (85.92%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TAIR10
Match: AT3G24570.1 (AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 333.6 bits (854), Expect = 9.1e-92 Identity = 157/229 (68.56%), Postives = 178/229 (77.73%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TAIR10
Match: AT2G14860.1 (AT2G14860.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 78.2 bits (191), Expect = 6.9e-15 Identity = 50/185 (27.03%), Postives = 85/185 (45.95%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TAIR10
Match: AT4G04470.1 (AT4G04470.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 75.1 bits (183), Expect = 5.8e-14 Identity = 45/183 (24.59%), Postives = 89/183 (48.63%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. TAIR10
Match: AT4G33905.1 (AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 47/185 (25.41%), Postives = 82/185 (44.32%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. NCBI nr
Match: gi|449443149|ref|XP_004139343.1| (PREDICTED: protein Mpv17 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 5.0e-124 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. NCBI nr
Match: gi|659071149|ref|XP_008458377.1| (PREDICTED: protein Mpv17 [Cucumis melo]) HSP 1 Score: 448.7 bits (1153), Expect = 5.5e-123 Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. NCBI nr
Match: gi|1009160285|ref|XP_015898267.1| (PREDICTED: protein Mpv17 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99 Identity = 167/212 (78.77%), Postives = 182/212 (85.85%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. NCBI nr
Match: gi|1009160287|ref|XP_015898268.1| (PREDICTED: protein Mpv17 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 364.8 bits (935), Expect = 1.0e-97 Identity = 167/212 (78.77%), Postives = 182/212 (85.85%), Query Frame = 1
BLAST of CSPI02G01140.1 vs. NCBI nr
Match: gi|802627475|ref|XP_012076701.1| (PREDICTED: protein Mpv17 isoform X1 [Jatropha curcas]) HSP 1 Score: 356.7 bits (914), Expect = 2.9e-95 Identity = 160/212 (75.47%), Postives = 177/212 (83.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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