CSPI01G25870.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G25870.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ATP-dependent DNA helicase pcrA
Location	Chr1 : 21255457 .. 21257834 (+)
Sequence length	1236

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGGAAGAACAACACTTTAATGGTTCATTCTCAACTCCATTTTCTCACCATTTGAATTACAATAATCTTCTCAATCATCATCAATATCTCTCAACTCCTCTTTCTCCAAATCACAAGCTTCACCATTGCACACCACAAACTCAACACCAGGTTTTCCTAAACCCTTTTTTTTTTTGTGTGTGTGTTTTCATAATTTTTCATCTCTTCTGAAATCCTCTTTTGATCTAAAAATGGTTTTGTTAGTGTTTTATAAACATATAAATTAGGTTAAACTATATTGCAAATTTGAAAAAAGTTAGTATTTAGTGCTATTATTTATCAAAGTTAATCAGGTTATATTTTACTAATAAGGGATTAAATTTGTACTAAAATTCTGTCAATCGAGTTATATAATTTTAACATGATATCAAAGTTAGAGTTCTATACTAAACTATTGGCATGTCATCTCACTTGTTAGGACTTGTACAGGTTTTCAACTCACCAAGTTACGTAGTTTAAAAAAGAAAGTTAATATTTTCTTCTTTTTTTTTTTTTTGTTGGTATAGGAAGAAGAGTTAATGGAAAGTCTCATGAAGTTGCCTGCAATTGGATTAAAGCTTCAAATTTCACCCTCTTTGTTAAAACAAATGCAAAGAAGCACACTATCCAAAAGGAAGAGGATCATAAATAATGCAAGAACAGATCATCATGATGGTGAAAGGTTAAAGGCCTCCATTTTAGGTGCATTGATGCTTCAAATTGGGTCTTGGCAGGTAATATTTTTGTCGAATCTTCGAGAAGTTGTACGTTCGTCGATTTTCTTATTGTAAAATCACAAGACCGAGCGATCATTATTATTTTCGTTAAGATCTTCTTCTTTTTTTTTTATGGTGATAATATATATGGTGATTTTATGTGGTAACTTCGTTAAGATCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTGCTATGGTACTTCAGTTAGTGGCTAAAAATGAAGGTGACTTGGTTGCAAAATTCTATTTTGCAAAGAGGCAGCTTGTGTGGGAGATTTTGAGAAATGGGCTGAAACAAAAAATTGAAATTGAATGGTCAAACATCATAGGCATCCAAGCTTTTCTTGAAGAAGACAAACCAGGAATCTTGGAAGTAGAGGTAATTAATTAACTGTATATTACTTCCTTTTTTTTCATAGGGTTTAGTAAGTTCGAGTGTTTCTAGCTAAACACAAGGTTTGCTTATAGTTTGTCCCTCTTTGTTGATCTTTTCAAATATATTATATGCAGTTAAACCATCCGCCGAAGTTTTATAAGGAGATCGAACCTGAGCCACGGAAACACACGCAATGGACAGATGGATCGGATTTTACAGAAGGTCAAGCTTATGTAAATAGGTATAGTTTTGCAGTTTATATATGTTCACTACAAGAATTAATGATCAAAATAAGTTTATAAAGTTAATAGAGATCATTTTATGTGTTTTGGTAGGAGGCATTGCATTGTGTTTCCTCCAAAAGTGTTGGATAAACACTATGAGAAACTAAAAGATAAGGATAAGCATTTGTTTGAGCTGAGCCGAAGGCCATTCCCAACTTTACATTTCTCCTATTTCTCTTCAGAAGTTGCTTTCAATAATCAAATTTCTTCTATTATTCAATTTGAGGATATAATGTTCAACCAAATCCCTTCTTTTCCACCCCATCTTTCAGCTAATGAAATTCACAGCCTAACTTCACCAAAATCAGGTATACACATTTTCTCTTATCACTTTTTTAGATTTGTAAATCTTTTCCTTTTTCAGACAATTAATTGGTTCCTTGTACTTTGGTTGTAATTAATTAATTGCGAGACATGAAGAATGTCGATCTCTCGAAGTTAATGAACACAGTTTAAATGGAAAAAAAAACACATACGTTTTTTAACGAGATGTTGGAGTAATGCACTATGAAATGAATGATATATTTAAGATATTATTACATATGGGTAAGTAGATAAGAATAAATGAAACTTTTACATTTATTACAACATTTTGTAATTTTCCTTACAATTTTGTCTTATAGTTGTTGATTACAATACACCACATTTCAATGAGATCATAACCCATCAAGACGAAAGAATGGAGGTGTTGAACAAAGGAAACAGCATGAGAAGATATGAAGCTGAAGCATCATCAACCAATTATTACAATAATCATGGGTATGATCATGGGCTTGAAAATGCAAATCCAATGGCTTCTATGTTTTGGTTGGGACAAAATGGTGAAGCAGCTGCTGCAACTAATTATTTGAGTCACCAACAAAACAAGAGTTACTACGATGATAACGTTGAGTACTGTTTCAATGGAAGTGTTATGGACATGAGAACCCCTCAGCTTCCAAGTGGCCACTTTTTTTAG

mRNA sequence

ATGGATAAGGAAGAACAACACTTTAATGGTTCATTCTCAACTCCATTTTCTCACCATTTGAATTACAATAATCTTCTCAATCATCATCAATATCTCTCAACTCCTCTTTCTCCAAATCACAAGCTTCACCATTGCACACCACAAACTCAACACCAGGAAGAAGAGTTAATGGAAAGTCTCATGAAGTTGCCTGCAATTGGATTAAAGCTTCAAATTTCACCCTCTTTGTTAAAACAAATGCAAAGAAGCACACTATCCAAAAGGAAGAGGATCATAAATAATGCAAGAACAGATCATCATGATGGTGAAAGGTTAAAGGCCTCCATTTTAGGTGCATTGATGCTTCAAATTGGGTCTTGGCAGTTAGTGGCTAAAAATGAAGGTGACTTGGTTGCAAAATTCTATTTTGCAAAGAGGCAGCTTGTGTGGGAGATTTTGAGAAATGGGCTGAAACAAAAAATTGAAATTGAATGGTCAAACATCATAGGCATCCAAGCTTTTCTTGAAGAAGACAAACCAGGAATCTTGGAAGTAGAGTTAAACCATCCGCCGAAGTTTTATAAGGAGATCGAACCTGAGCCACGGAAACACACGCAATGGACAGATGGATCGGATTTTACAGAAGGTCAAGCTTATGTAAATAGGAGGCATTGCATTGTGTTTCCTCCAAAAGTGTTGGATAAACACTATGAGAAACTAAAAGATAAGGATAAGCATTTGTTTGAGCTGAGCCGAAGGCCATTCCCAACTTTACATTTCTCCTATTTCTCTTCAGAAGTTGCTTTCAATAATCAAATTTCTTCTATTATTCAATTTGAGGATATAATGTTCAACCAAATCCCTTCTTTTCCACCCCATCTTTCAGCTAATGAAATTCACAGCCTAACTTCACCAAAATCAGTTGTTGATTACAATACACCACATTTCAATGAGATCATAACCCATCAAGACGAAAGAATGGAGGTGTTGAACAAAGGAAACAGCATGAGAAGATATGAAGCTGAAGCATCATCAACCAATTATTACAATAATCATGGGTATGATCATGGGCTTGAAAATGCAAATCCAATGGCTTCTATGTTTTGGTTGGGACAAAATGGTGAAGCAGCTGCTGCAACTAATTATTTGAGTCACCAACAAAACAAGAGTTACTACGATGATAACGTTGAGTACTGTTTCAATGGAAGTGTTATGGACATGAGAACCCCTCAGCTTCCAAGTGGCCACTTTTTTTAG

Coding sequence (CDS)

ATGGATAAGGAAGAACAACACTTTAATGGTTCATTCTCAACTCCATTTTCTCACCATTTGAATTACAATAATCTTCTCAATCATCATCAATATCTCTCAACTCCTCTTTCTCCAAATCACAAGCTTCACCATTGCACACCACAAACTCAACACCAGGAAGAAGAGTTAATGGAAAGTCTCATGAAGTTGCCTGCAATTGGATTAAAGCTTCAAATTTCACCCTCTTTGTTAAAACAAATGCAAAGAAGCACACTATCCAAAAGGAAGAGGATCATAAATAATGCAAGAACAGATCATCATGATGGTGAAAGGTTAAAGGCCTCCATTTTAGGTGCATTGATGCTTCAAATTGGGTCTTGGCAGTTAGTGGCTAAAAATGAAGGTGACTTGGTTGCAAAATTCTATTTTGCAAAGAGGCAGCTTGTGTGGGAGATTTTGAGAAATGGGCTGAAACAAAAAATTGAAATTGAATGGTCAAACATCATAGGCATCCAAGCTTTTCTTGAAGAAGACAAACCAGGAATCTTGGAAGTAGAGTTAAACCATCCGCCGAAGTTTTATAAGGAGATCGAACCTGAGCCACGGAAACACACGCAATGGACAGATGGATCGGATTTTACAGAAGGTCAAGCTTATGTAAATAGGAGGCATTGCATTGTGTTTCCTCCAAAAGTGTTGGATAAACACTATGAGAAACTAAAAGATAAGGATAAGCATTTGTTTGAGCTGAGCCGAAGGCCATTCCCAACTTTACATTTCTCCTATTTCTCTTCAGAAGTTGCTTTCAATAATCAAATTTCTTCTATTATTCAATTTGAGGATATAATGTTCAACCAAATCCCTTCTTTTCCACCCCATCTTTCAGCTAATGAAATTCACAGCCTAACTTCACCAAAATCAGTTGTTGATTACAATACACCACATTTCAATGAGATCATAACCCATCAAGACGAAAGAATGGAGGTGTTGAACAAAGGAAACAGCATGAGAAGATATGAAGCTGAAGCATCATCAACCAATTATTACAATAATCATGGGTATGATCATGGGCTTGAAAATGCAAATCCAATGGCTTCTATGTTTTGGTTGGGACAAAATGGTGAAGCAGCTGCTGCAACTAATTATTTGAGTCACCAACAAAACAAGAGTTACTACGATGATAACGTTGAGTACTGTTTCAATGGAAGTGTTATGGACATGAGAACCCCTCAGCTTCCAAGTGGCCACTTTTTTTAG

Homology

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BLAST of CSPI01G25870.1 vs. TrEMBL
Match: A0A0A0M1F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561420 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 2.2e-236
Identity = 405/411 (98.54%), Postives = 407/411 (99.03%), Query Frame = 1


Query: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60
           MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL
Sbjct: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60

Query: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120
           MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW
Sbjct: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120

Query: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180
           QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL
Sbjct: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180

Query: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240
           NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL
Sbjct: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240

Query: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300
           FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS
Sbjct: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300

Query: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNNHGYDHGLENANPMASM 360
           VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNN    HGL+NANPMASM
Sbjct: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNN----HGLDNANPMASM 360

Query: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNVEYCFNGSVMDMRTPQLPSGHFF 412
           FWLGQNGEAAAATNYLSHQQNKSYYDDN+EYCFNGSVMDMRTPQLPSGHFF
Sbjct: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNIEYCFNGSVMDMRTPQLPSGHFF 407

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BLAST of CSPI01G25870.1 vs. TrEMBL
Match: A0A164TZF7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025281 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 116/229 (50.66%), Postives = 150/229 (65.50%), Query Frame = 1


Query: 66  IGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSWQLVAK 125
           +GLKLQ +PSL+  ++   L  RKR   +A+ DH   E+LKAS   A +LQIGSW    +
Sbjct: 83  LGLKLQKTPSLINSIEMKLLEARKR---DAKLDH---EKLKASNFPARLLQIGSWVRPCR 142

Query: 126 NEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVELNHPPK 185
           NEGDLVAK Y+AK+++VWEIL   LK+KIE++WS+IIGI+A + ED+PGILE+EL HPP 
Sbjct: 143 NEGDLVAKCYYAKKKIVWEILEGALKRKIEVQWSDIIGIKAIVGEDRPGILELELKHPPT 202

Query: 186 FYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHLFELSR 245
           ++ E  P+PRKHT W   SDFT GQA   RRH I FPP +LDKHYEKL   D+ L ELSR
Sbjct: 203 YFLETNPQPRKHTLWQTASDFTGGQAPSFRRHFISFPPGILDKHYEKLLQCDQRLLELSR 262

Query: 246 RPFPTLHFSYFSSEVAF----------NNQISSIIQFEDIMFNQIPSFP 285
           + FPTL   YF S   +           N +S ++  E +   Q+  FP
Sbjct: 263 KTFPTLPHPYFDSNNLYRLSEHPCNLNRNHVSELVSHE-MQHYQVQKFP 304

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BLAST of CSPI01G25870.1 vs. TrEMBL
Match: B9I6Z7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s01040g PE=4 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 121/290 (41.72%), Postives = 173/290 (59.66%), Query Frame = 1


Query: 46  TPQTQH-QEEELMESLMKLPAIGLKLQISPSLLKQMQRSTLSKRKRI------INNARTD 105
           TP+  H Q++E+   LM+L  +GL L I+P+L+  +     +            + +RT 
Sbjct: 52  TPKLSHDQQDEMARKLMQLNPLGLHLSITPNLMNSITNPNYTTTVEAGATCESSDQSRTS 111

Query: 106 HHDG-----ERLKASILGALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQK 165
              G     E+LKAS   A  ++IGSW+  ++NEGDLVAK YFAK++LVWE+L+ GLK K
Sbjct: 112 SDFGQQPMSEKLKASNFAATFIKIGSWERKSRNEGDLVAKCYFAKKKLVWELLKGGLKNK 171

Query: 166 IEIEWSNIIGIQAFLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYV 225
           IEI+W++IIGI A ++E++ GIL++ELN PP F++E +P+PRKHT W   SDFT GQA +
Sbjct: 172 IEIQWNDIIGINALMQENQLGILQIELNQPPTFHEETDPQPRKHTIWKPASDFTGGQASI 231

Query: 226 NRRHCIVFPPKVLDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSSE------VAFNNQIS 285
            RRH + FP   LDKHYEKL   +  LFELS++ FPTL   YF S+      ++F+   S
Sbjct: 232 CRRHFLTFPAGYLDKHYEKLLLNEPRLFELSKQSFPTLKNPYFRSKFYGYRGISFDFNRS 291

Query: 286 SIIQFEDIMFNQIPSFPP------------HLSANEIHSLTSPKSVVDYN 306
                  + FN  P+FPP            H   +    + SP SV+D++
Sbjct: 292 GQDIHPGMQFN-YPNFPPHPVQIQHLQPYGHTGLSSFKEIPSPSSVMDFS 340

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BLAST of CSPI01G25870.1 vs. TrEMBL
Match: B9RFI7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1434920 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.9e-50
Identity = 131/340 (38.53%), Postives = 194/340 (57.06%), Query Frame = 1


Query: 46  TPQTQHQEEELMESLMKLPAIGLKLQISPSLLKQMQRSTLSKR----KRIINNARTDHHD 105
           T Q   +E E+ + L++L   GLKL ++ SL++ +  +    +    K    + + D + 
Sbjct: 60  TLQENSEEAEVADVLLRLRPFGLKLSLTSSLVESVDMNLNHPKHAAAKSCHPHPKVDDYG 119

Query: 106 G----ERLKASILGALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIE 165
                E+LKAS   A +L+IG+W+  +KNEGDLVAK Y+AK++LVWE L  GLK KIEI+
Sbjct: 120 SQPISEKLKASNFSASLLKIGTWERRSKNEGDLVAKCYYAKKKLVWEFLEKGLKSKIEIQ 179

Query: 166 WSNIIGIQAFLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRH 225
           W++II ++A ++E++PGILE+EL+  P F++E +P+PRKHT W   SDFT GQA   RRH
Sbjct: 180 WNDIIALKAHIQENEPGILEIELSQAPTFHEETDPQPRKHTIWRLTSDFTRGQASTFRRH 239

Query: 226 CIVFPPKVLDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSSEV------AFNNQISSIIQ 285
            +VFPP  LD+HYEKL   D  L+ LS+RPFP+L   YF   V       FN        
Sbjct: 240 YLVFPPGALDRHYEKLLQCDHRLYGLSQRPFPSLESLYFEPCVFNYPNFFFNYHGERQFN 299

Query: 286 FEDI-------MFNQIPSFPPHLSANEIHSLTSPKSVVDYNTPHFNEIITH---QDERME 345
           F  I        + Q    PP LS  + H   SP SV+D++  H +E I H   ++ RM 
Sbjct: 300 FSGIPSPLMAVHYGQYEQTPPQLSFKQTH---SPISVMDFS--HSDEQINHNVFENPRMS 359

Query: 346 VLNKGNSMRRYEAEASSTNYYNNHGYDHGLENANPMASMF 362
           + ++  +    ++ A+S  ++          +ANP AS +
Sbjct: 360 IWSQVVNNNVIDSSAASIPFH----------HANPPASSY 384

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BLAST of CSPI01G25870.1 vs. TrEMBL
Match: V4T5S9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003523mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.4e-49
Identity = 109/228 (47.81%), Postives = 145/228 (63.60%), Query Frame = 1


Query: 55  ELMESLMKLPAIGLKLQISPSLLKQMQ------------------RSTLSKRKRIINNAR 114
           + +E+L  LP + L+L IS S L +++                    T SKR   ++   
Sbjct: 67  KFLENLNTLPPLNLRLGISKSFLVEVETRLSQQSSHTQQCRAQTYEMTRSKRADFVSQQM 126

Query: 115 TDHHDGERLKASILGALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEI 174
           T     E++KAS   AL L+IGSW+ V ++EGDLVAK Y+AK++LVWE L   LK+KIEI
Sbjct: 127 T-----EKMKASNFPALELRIGSWERVTRHEGDLVAKSYYAKKKLVWEFLEKSLKRKIEI 186

Query: 175 EWSNIIGIQAFLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRR 234
           +W++IIGI+A  EE++PGILE+EL  PP F+ EI+P+PRKHT W    DFT GQA V R+
Sbjct: 187 QWADIIGIRATTEENEPGILELELKQPPTFHHEIDPQPRKHTNWRLTEDFTGGQAPVFRK 246

Query: 235 HCIVFPPKVLDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSSEVAFNN 265
           H + FPP VLD+H+EKL   D  LFELSR+PFPTL   YF     F +
Sbjct: 247 HYLKFPPGVLDRHFEKLLQCDSRLFELSRKPFPTLDSPYFHQSCIFEH 289

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BLAST of CSPI01G25870.1 vs. TAIR10
Match: AT2G24100.1 (AT2G24100.1 unknown protein)

HSP 1 Score: 170.2 bits (430), Expect = 2.6e-42
Identity = 103/252 (40.87%), Postives = 148/252 (58.73%), Query Frame = 1


Query: 59  SLMKLPA-IGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDG------ERLKASILG 118
           SL++ P+ +GL L+ SPS  +++    LS+     N+ + +          E+LKAS   
Sbjct: 57  SLLEEPSPLGLSLKKSPSF-QELIEMKLSQSGDDSNSVKKESFGFGGVGTVEKLKASNFP 116

Query: 119 ALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEED 178
           A +L+IG W+  ++ EGDLVAK YFAK +LVWE+L  GLK KIEI+WS+I+ ++A L ED
Sbjct: 117 ATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQGLKSKIEIQWSDIMALKANLPED 176

Query: 179 KPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYE 238
           +PG L + L   P F++E  P+PRKHT W   SDFT+GQA +NR+H +  PP +++KH+E
Sbjct: 177 EPGTLTIVLARRPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCPPGIMNKHFE 236

Query: 239 KLKDKDKHLFELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANE 298
           KL   D  LF LSR+P   L   +F S ++     S              S   H+S + 
Sbjct: 237 KLVQCDHRLFCLSRQPEINLAAPFFDSRLSIFEDPSVSGSHNIASPVGAQSSSEHVSLS- 296

Query: 299 IHSLTSPKSVVD 304
            H   SP SV+D
Sbjct: 297 -HDALSPSSVMD 305

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BLAST of CSPI01G25870.1 vs. TAIR10
Match: AT4G30780.1 (AT4G30780.1 unknown protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-39
Identity = 77/156 (49.36%), Postives = 105/156 (67.31%), Query Frame = 1


Query: 103 ERLKASILGALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNII 162
           E+LKAS   A +L+IG W+  ++ EGDLVAK YFAK +LVWE+L  GLK KIEI+WS+I+
Sbjct: 134 EKLKASNFPASLLKIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQGLKSKIEIQWSDIM 193

Query: 163 GIQAFLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFP 222
            ++A   ED PG L + L   P F++E  P+PRKHT W   SDFT+GQA +NR+H +   
Sbjct: 194 ALKANCPEDGPGTLTLVLARQPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCA 253

Query: 223 PKVLDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSS 259
             +++KH+EKL   D  LF LSR+P   +   YF +
Sbjct: 254 QGIMNKHFEKLVQCDHRLFHLSRQPEIAIDSPYFDA 289

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BLAST of CSPI01G25870.1 vs. TAIR10
Match: AT3G05770.1 (AT3G05770.1 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-26
Identity = 82/230 (35.65%), Postives = 119/230 (51.74%), Query Frame = 1


Query: 64  PAIGLKLQISPSLLKQMQRST----LSKRKRIINNARTDH--HDGERLKASILGALMLQI 123
           P + L L  +P L+ +++           ++  N+++T       E+LKA       ++I
Sbjct: 24  PRLNLPLTKTPELINKIESYLKVHYTCPHQQTENSSKTSTLPKSPEKLKAMNFPISTIKI 83

Query: 124 GSWQLVAKNEGDLVAKFYFAKRQLVWEIL-------RNGLKQKIEIEWSNIIGIQAFL-E 183
           G    VAKN  D+VAKFYFAK++L+WE L          LK KIEI+W+++   +  +  
Sbjct: 84  GDCVFVAKNPDDIVAKFYFAKKKLLWEFLFGEPVANMPRLKSKIEIQWNDVSSFEESINS 143

Query: 184 EDKPGILEVELNHPPKFYKEIEPEPRKHTQWTD-GSDFTEGQAYVNRRHCIVFPPKVLDK 243
            D+ GIL++EL   P F+ E  P+  KHTQW     DFT  QA   RRH + FPP VL K
Sbjct: 144 RDETGILKIELKKRPTFFTETNPQAGKHTQWKQLDYDFTGDQASYYRRHTLHFPPGVLQK 203

Query: 244 HYEKLKDKDKHLFELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFN 279
           + EKL   D    +L + PFP     YF  ++ F N  SS    + + FN
Sbjct: 204 NLEKLL-TDSFWSKLYKVPFPVHESLYF--DIGFENNNSSNGHSKTVGFN 250

[Close]

BLAST of CSPI01G25870.1 vs. TAIR10
Match: AT1G54300.1 (AT1G54300.1 unknown protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 73/181 (40.33%), Postives = 98/181 (54.14%), Query Frame = 1


Query: 115 LQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRN-------GLKQKIEIEWSNIIGI-QA 174
           ++IG W +VAKN  D+VAKFYFAK++L+WE L          LK+KIEI+W+++    ++
Sbjct: 8   IRIGGWVVVAKNPDDIVAKFYFAKKKLIWEFLFGEPETNTLRLKRKIEIQWNDVSSFEES 67

Query: 175 FLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTD-GSDFTEGQAYVNRRHCIVFPPKV 234
               D+ GIL++EL   P F+ E  P+  KHTQW     DFT   A   RRH + FPP V
Sbjct: 68  ISSRDETGILKIELKKRPTFFIETNPQAGKHTQWKQLDHDFTGDHASNYRRHTLHFPPGV 127

Query: 235 LDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPP 287
           L K+ EKL   D    +L   PFP     YF S   F N  S       + FN + + P 
Sbjct: 128 LQKNLEKLV-TDSFWSKLYEVPFPVHESRYFDS--GFENNSSRNSHSHTVGFN-VNNGPQ 184

[Close]

BLAST of CSPI01G25870.1 vs. NCBI nr
Match: gi|700210915|gb|KGN66011.1| (hypothetical protein Csa_1G561420 [Cucumis sativus])

HSP 1 Score: 825.9 bits (2132), Expect = 3.2e-236
Identity = 405/411 (98.54%), Postives = 407/411 (99.03%), Query Frame = 1


Query: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60
           MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL
Sbjct: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60

Query: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120
           MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW
Sbjct: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120

Query: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180
           QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL
Sbjct: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180

Query: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240
           NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL
Sbjct: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240

Query: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300
           FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS
Sbjct: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300

Query: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNNHGYDHGLENANPMASM 360
           VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNN    HGL+NANPMASM
Sbjct: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNN----HGLDNANPMASM 360

Query: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNVEYCFNGSVMDMRTPQLPSGHFF 412
           FWLGQNGEAAAATNYLSHQQNKSYYDDN+EYCFNGSVMDMRTPQLPSGHFF
Sbjct: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNIEYCFNGSVMDMRTPQLPSGHFF 407

[Close]

BLAST of CSPI01G25870.1 vs. NCBI nr
Match: gi|659099332|ref|XP_008450546.1| (PREDICTED: uncharacterized protein LOC103492114 isoform X1 [Cucumis melo])

HSP 1 Score: 769.2 bits (1985), Expect = 3.6e-219
Identity = 382/411 (92.94%), Postives = 397/411 (96.59%), Query Frame = 1


Query: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60
           MDKEEQHFNGSFSTPFSHH +YNN L +H +LS PL PNHKLHHCTPQT+HQEEELME+L
Sbjct: 1   MDKEEQHFNGSFSTPFSHHFDYNNYLLNHHHLSIPLPPNHKLHHCTPQTKHQEEELMETL 60

Query: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120
           MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW
Sbjct: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120

Query: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180
           QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL
Sbjct: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180

Query: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240
           NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL
Sbjct: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240

Query: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300
           FELS+RPFPTLHFSYFSSEVAF+NQISSIIQFEDIM N+IPSFPPHLSANEIHSLTSPKS
Sbjct: 241 FELSQRPFPTLHFSYFSSEVAFSNQISSIIQFEDIMSNKIPSFPPHLSANEIHSLTSPKS 300

Query: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNNHGYDHGLENANPMASM 360
           VVDYNTPHFNEIITHQD+RMEVLNKGNSMRRYE EASSTNYYNN+GYDHGL+NANPMASM
Sbjct: 301 VVDYNTPHFNEIITHQDQRMEVLNKGNSMRRYEVEASSTNYYNNYGYDHGLDNANPMASM 360

Query: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNVEYCFNGSVMDMRTPQLPSGHFF 412
           FWLG+NGEAAAATN LSHQQNKS+Y D++E CFNGS  DMRTPQLP GHFF
Sbjct: 361 FWLGRNGEAAAATN-LSHQQNKSFY-DHIE-CFNGS-EDMRTPQLPGGHFF 407

[Close]

BLAST of CSPI01G25870.1 vs. NCBI nr
Match: gi|659099334|ref|XP_008450547.1| (PREDICTED: uncharacterized protein LOC103492114 isoform X2 [Cucumis melo])

HSP 1 Score: 762.7 bits (1968), Expect = 3.3e-217
Identity = 381/411 (92.70%), Postives = 396/411 (96.35%), Query Frame = 1


Query: 1   MDKEEQHFNGSFSTPFSHHLNYNNLLNHHQYLSTPLSPNHKLHHCTPQTQHQEEELMESL 60
           MDKEEQHFNGSFSTPFSHH +YNN L +H +LS PL PNHKLHHCTPQT+HQEEELME+L
Sbjct: 1   MDKEEQHFNGSFSTPFSHHFDYNNYLLNHHHLSIPLPPNHKLHHCTPQTKHQEEELMETL 60

Query: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120
           MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW
Sbjct: 61  MKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQIGSW 120

Query: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180
           QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL
Sbjct: 121 QLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGILEVEL 180

Query: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPKVLDKHYEKLKDKDKHL 240
           NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVN RHCIVFPPKVLDKHYEKLKDKDKHL
Sbjct: 181 NHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVN-RHCIVFPPKVLDKHYEKLKDKDKHL 240

Query: 241 FELSRRPFPTLHFSYFSSEVAFNNQISSIIQFEDIMFNQIPSFPPHLSANEIHSLTSPKS 300
           FELS+RPFPTLHFSYFSSEVAF+NQISSIIQFEDIM N+IPSFPPHLSANEIHSLTSPKS
Sbjct: 241 FELSQRPFPTLHFSYFSSEVAFSNQISSIIQFEDIMSNKIPSFPPHLSANEIHSLTSPKS 300

Query: 301 VVDYNTPHFNEIITHQDERMEVLNKGNSMRRYEAEASSTNYYNNHGYDHGLENANPMASM 360
           VVDYNTPHFNEIITHQD+RMEVLNKGNSMRRYE EASSTNYYNN+GYDHGL+NANPMASM
Sbjct: 301 VVDYNTPHFNEIITHQDQRMEVLNKGNSMRRYEVEASSTNYYNNYGYDHGLDNANPMASM 360

Query: 361 FWLGQNGEAAAATNYLSHQQNKSYYDDNVEYCFNGSVMDMRTPQLPSGHFF 412
           FWLG+NGEAAAATN LSHQQNKS+Y D++E CFNGS  DMRTPQLP GHFF
Sbjct: 361 FWLGRNGEAAAATN-LSHQQNKSFY-DHIE-CFNGS-EDMRTPQLPGGHFF 406

[Close]

BLAST of CSPI01G25870.1 vs. NCBI nr
Match: gi|778662235|ref|XP_011659575.1| (PREDICTED: uncharacterized protein LOC105436206 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84
Identity = 160/165 (96.97%), Postives = 161/165 (97.58%), Query Frame = 1


Query: 57  MESLMKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQ 116
           MESLMKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQ
Sbjct: 1   MESLMKLPAIGLKLQISPSLLKQMQRSTLSKRKRIINNARTDHHDGERLKASILGALMLQ 60

Query: 117 IGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGIL 176
           IGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGIL
Sbjct: 61  IGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGIQAFLEEDKPGIL 120

Query: 177 EVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVF 222
           EVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNR    V+
Sbjct: 121 EVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRYSFAVY 165

[Close]

BLAST of CSPI01G25870.1 vs. NCBI nr
Match: gi|764597122|ref|XP_011466143.1| (PREDICTED: uncharacterized protein LOC101299979 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 124/288 (43.06%), Postives = 177/288 (61.46%), Query Frame = 1


Query: 46  TPQTQHQEEELMESLMKLPAIGLKLQISPSLLKQMQRSTLSKR-KRIINNARTDHHDGER 105
           TP   +++ +L ++L+ LP +GL L  +PS L   ++    ++ KR          + E+
Sbjct: 59  TPIQSNEKAQLAQTLLSLPPLGLSLGKTPSFLDLKEKFPRKRKPKRAAEVNVQSMSEKEK 118

Query: 106 LKASILGALMLQIGSWQLVAKNEGDLVAKFYFAKRQLVWEILRNGLKQKIEIEWSNIIGI 165
           LKAS   A +L+IGSWQ V ++EGDLVAK Y+AKR+LVWEIL NGLK KIE++WS+II I
Sbjct: 119 LKASNFCASLLRIGSWQRVTEHEGDLVAKCYYAKRKLVWEILDNGLKSKIELQWSDIIAI 178

Query: 166 QAFLEEDKPGILEVELNHPPKFYKEIEPEPRKHTQWTDGSDFTEGQAYVNRRHCIVFPPK 225
           +A +EE++PGILE+EL  PP F++E  P+PRKHT W   +DFT G A ++RRH + FPP 
Sbjct: 179 RAVIEENQPGILEIELGQPPTFHRESNPQPRKHTMWNPATDFTGGAALIHRRHYLQFPPG 238

Query: 226 VLDKHYEKLKDKDKHLFELSRRPFPTLHFSYFSSEVAFNNQISSIIQF----EDIMFNQI 285
           +LDKHYEKL   +    E+S+RPFP+    YF S   +N       +F     +I  N  
Sbjct: 239 LLDKHYEKLLQCESRFLEMSQRPFPSQRSPYFQS---YNGGADISFEFGSLGAEIPSNLP 298

Query: 286 PSFPPHLSANEIHSL------------TSPKSVVDYNTPHFNEIITHQ 317
             FP HL   +I +             TSP SV+D+++P  +E+I +Q
Sbjct: 299 LQFPTHLDPRQIQAYEETKASLCYTDSTSPVSVMDFSSP-LDEVIGNQ 342

The following BLAST results are available for this feature:

BLAST of CSPI01G25870.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G25870.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1F5_CUCSA	2.2e-236	98.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G561420 PE=4 SV=1	[more]
A0A164TZF7_DAUCA	2.1e-53	50.66	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025281 PE=4 SV=1	[more]
B9I6Z7_POPTR	6.9e-52	41.72	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s01040g PE=4 SV=2	[more]
B9RFI7_RICCO	4.9e-50	38.53	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1434920 PE=4 SV=1	[more]
V4T5S9_9ROSI	5.4e-49	47.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003523mg PE=4 SV=1	[more]

BLAST of CSPI01G25870.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24100.1	2.6e-42	40.87	unknown protein	[more]
AT4G30780.1	3.5e-39	49.36	unknown protein	[more]
AT3G05770.1	1.2e-26	35.65	unknown protein	[more]
AT1G54300.1	1.5e-26	40.33	unknown protein	[more]

BLAST of CSPI01G25870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210915\|gb\|KGN66011.1\|	3.2e-236	98.54	hypothetical protein Csa_1G561420 [Cucumis sativus]	[more]
gi\|659099332\|ref\|XP_008450546.1\|	3.6e-219	92.94	PREDICTED: uncharacterized protein LOC103492114 isoform X1 [Cucumis melo]	[more]
gi\|659099334\|ref\|XP_008450547.1\|	3.3e-217	92.70	PREDICTED: uncharacterized protein LOC103492114 isoform X2 [Cucumis melo]	[more]
gi\|778662235\|ref\|XP_011659575.1\|	4.4e-84	96.97	PREDICTED: uncharacterized protein LOC105436206 [Cucumis sativus]	[more]
gi\|764597122\|ref\|XP_011466143.1\|	1.6e-54	43.06	PREDICTED: uncharacterized protein LOC101299979 isoform X1 [Fragaria vesca subsp...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G25870	CSPI01G25870	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G25870.1	CSPI01G25870.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G25870.1.cds1	CSPI01G25870.1.cds1	CDS
CSPI01G25870.1.cds2	CSPI01G25870.1.cds2	CDS
CSPI01G25870.1.cds3	CSPI01G25870.1.cds3	CDS
CSPI01G25870.1.cds4	CSPI01G25870.1.cds4	CDS
CSPI01G25870.1.cds5	CSPI01G25870.1.cds5	CDS
CSPI01G25870.1.cds6	CSPI01G25870.1.cds6	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33494	FAMILY NOT NAMED	coord: 55..274 score: 2.3