CSPI01G23540.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G23540.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	17.5 kDa class I heat shock protein
Location	Chr1 : 19067955 .. 19068735 (+)
Sequence length	483

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCTATAAACTCTCGCCTCTTTCGCTTTCTTTACCAATCAGAAATTCCAAACCACTAATTCTATCAAGATCTTTGTTGAATTCAATCAAAGCGCTTCCAAGTTTCGATTTCAAGTCGCGGATTAAGTTCTTCAAACTAAATCTACGAAGATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAAACACCGAGTTATCATGTGAAATTGTAACTAATGAATCCATGCAAACTGTCTTTGTGAAATTTGTACAAATTACGTTCGATTAATATGAATAAAAGAAGCCATATTGCATCTTAAAAAGACGATTGATTATCATTATCAAATCCGCAA

mRNA sequence

ATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAA

Coding sequence (CDS)

ATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAA

Homology

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BLAST of CSPI01G23540.1 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-57
Identity = 113/162 (69.75%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISS-HFPEIAQETSAIVNAHVDWK 60
           MS+IP+FF GRR +VFDPF+  D+ DPF DF FP+++SS  FPE ++E SA V+  VDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPFS-LDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED +V+QISGERNVEKEDKN+ WHR+ERSSGKF RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           FR+PE+ K E+++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of CSPI01G23540.1 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.9e-55
Identity = 110/161 (68.32%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPS F GRR +VFDPF+  D+ DPF DFHFP+S+S+       E SA VN  VDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFS-LDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV +AD+PGLKKEEVKV+IED RV+QISGERN+EKEDKN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K E+++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of CSPI01G23540.1 vs. Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.3e-55
Identity = 111/161 (68.94%), Postives = 133/161 (82.61%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPSFF GRR SVFDPF+  D+ DPF DF FPSS+S+       E SA V+  VDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPFS-LDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVK+EI+DGRV+QISGERNVEKEDKN+ WHR+ERSSGK  RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K ++++ASMENGVLTV VPK + KK DVK+++ISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of CSPI01G23540.1 vs. Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 109/161 (67.70%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IP FF GRR +VFDPF+  D+ DPF DFH P+S       ++ E SA V+  VDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPFS-LDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVKV+IED RV+QISGERNVEKEDKN+ WHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K  +++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of CSPI01G23540.1 vs. Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-53
Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS+IPSFF+GRR +VFDPF+  D+ DP    FP S SS      +E  A V+  VDWKET
Sbjct: 1   MSLIPSFFSGRRSNVFDPFS-LDVWDPLK-DFPFSNSSPSASFPRENPAFVSTRVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED RV+QISGER+VEKEDKN++WHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K +K++ASMENGVLTV VPK + KK +VKS+EISG
Sbjct: 121 LPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158

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BLAST of CSPI01G23540.1 vs. TrEMBL
Match: A0A0A0M0N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 7.7e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. TrEMBL
Match: H6TB43_CITLA (HSP18.2A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 8.6e-75
Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDG+VIQISGER++EKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ KKTDVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. TrEMBL
Match: A0A0A0LV15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-73
Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDG+VIQISGERNVEKEDK+EKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+I+ASMENGVLTV VPKA+ KK DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

[Close]

BLAST of CSPI01G23540.1 vs. TrEMBL
Match: V7CPR7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G231500g PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 114/161 (70.81%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPSF  GRR +VFDPF+  D+ DPF DF FP+S+SS FP+ +++ SA V+ HVDWKE
Sbjct: 1   MSLIPSFLGGRRSNVFDPFS-LDVWDPFKDFPFPNSLSSSFPDFSRQNSAFVSTHVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV +AD+PGLKKEEVKVEIED RV+QISGERNVEKEDKN+ WHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFRADIPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K  +++ASMENGVLTV VPK D KK DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVSVPKEDSKKPDVKAIEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. TrEMBL
Match: V7CMJ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G231600g PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-56
Identity = 114/160 (71.25%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFD-FHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPSFF GRR +VFDPF+  D+ DPF  F FP S+SS FPEI+++ SA V+ HVDWKE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFS-LDVFDPFKGFPFPDSLSSSFPEISRQNSAFVSTHVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVKVEIED RV+QISGER VEKEDKN+ WHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVEIEDDRVLQISGERKVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEIS 160
           R+PE+ K ++++AS+ENGVLTV VPK + KK DVKS+EIS
Sbjct: 121 RLPENAKVDEVKASVENGVLTVTVPKEEVKKPDVKSIEIS 159

[Close]

BLAST of CSPI01G23540.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-53
Identity = 103/160 (64.38%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS+IPS F GRR +VFDPF+  DL DPF+  F  S +      A++ +A  NA VDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  V+QISGER+ E E+KN+KWHR+ER+SGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K E+++A+MENGVLTV+VPKA  KK  VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CSPI01G23540.1 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-52
Identity = 107/161 (66.46%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MSMIPSFFNG-RRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MSMIPSFFN  RR ++FDPF+  D+ DPF     SS       +++E SAIVNA VDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFS-LDVWDPFKELTSSS-------LSRENSAIVNARVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KADLPGLKKEEVKVEIE+  V++ISGER+VEKEDKN+ WHR+ERSSG+F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+VK ++++A+MENGVLTV VPKA+ KK DVKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CSPI01G23540.1 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 4.5e-51
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS+IPS F GRR +VFDPF+  D+ DPF+     S  ++ P  A + +A  NA VDW+ET
Sbjct: 1   MSLIPSIFGGRRTNVFDPFS-LDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGL+KEEVKVE+EDG ++QISGER+ E E+KN+KWHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K E+I+ASMENGVL+V VPK   KK +VKS++ISG
Sbjct: 121 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CSPI01G23540.1 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-49
Identity = 96/160 (60.00%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS++PSFF GRR +VFDPF+  D+ DPF+      +++     A++ +A  NA VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPFS-LDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG ++QISGER+ E E+K++ WHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K E+++ASMENGVL+V VPK    K +VKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CSPI01G23540.1 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 5.5e-49
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 1


Query: 1   MSMIPSFF--NGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDW 60
           MS+IPSFF  N R  S+FDPF+  D+ DPF +  FPSS+S        ETSAI NA VDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFS-LDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  V++ISGER+VEKE+K + WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRMPEDVKPEKIRASMENGVLTVMVPKAD--GKKTDVKSVEISG 161
           +F++PE+VK ++++ASMENGVLTV VPK +   KK  VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CSPI01G23540.1 vs. NCBI nr
Match: gi|449455054|ref|XP_004145268.1| (PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.1e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. NCBI nr
Match: gi|659115165|ref|XP_008457419.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 9.1e-78
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGR+ SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPED K E+IRASMENGVLTV VPKA+GKKTDVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. NCBI nr
Match: gi|659115167|ref|XP_008457420.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.5e-75
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+IRASMENGVLTV VPKA+ KK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. NCBI nr
Match: gi|315932720|gb|ADU55790.1| (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74
Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDG+VIQISGER++EKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ KKTDVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of CSPI01G23540.1 vs. NCBI nr
Match: gi|449472906|ref|XP_004153730.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-73
Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 1


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDG+VIQISGERNVEKEDK+EKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+I+ASMENGVLTV VPKA+ KK DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

The following BLAST results are available for this feature:

BLAST of CSPI01G23540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP16_SOYBN	1.8e-57	69.75	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]
HSP13_SOYBN	4.9e-55	68.32	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1	[more]
HSP11_SOYBN	8.3e-55	68.94	17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1	[more]
HSP14_SOYBN	2.4e-54	67.70	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1	[more]
HSP11_PEA	1.2e-53	68.13	18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1	[more]

BLAST of CSPI01G23540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0N2_CUCSA	7.7e-84	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1	[more]
H6TB43_CITLA	8.6e-75	89.38	HSP18.2A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0LV15_CUCSA	1.6e-73	88.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1	[more]
V7CPR7_PHAVU	1.2e-57	70.81	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G231500g PE=3 SV=1	[more]
V7CMJ3_PHAVU	1.4e-56	71.25	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G231600g PE=3 SV=1	[more]

BLAST of CSPI01G23540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	4.8e-53	64.38	heat shock protein 18.2	[more]
AT2G29500.1	1.4e-52	66.46	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	4.5e-51	63.13	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.5e-49	60.00	heat shock protein 17.4	[more]
AT1G07400.1	5.5e-49	63.03	HSP20-like chaperones superfamily protein	[more]

BLAST of CSPI01G23540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455054\|ref\|XP_004145268.1\|	1.1e-83	100.00	PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659115165\|ref\|XP_008457419.1\|	9.1e-78	93.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|659115167\|ref\|XP_008457420.1\|	5.5e-75	91.25	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|315932720\|gb\|ADU55790.1\|	1.2e-74	89.38	HSP18.2A [Citrullus lanatus]	[more]
gi\|449472906\|ref\|XP_004153730.1\|	2.3e-73	88.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G23540	CSPI01G23540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G23540.1	CSPI01G23540.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23540.1.utr5p1	CSPI01G23540.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23540.1.cds1	CSPI01G23540.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23540.1.utr3p1	CSPI01G23540.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..159 score: 1.2
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 56..145 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 15..159 score: 7.2
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 26..160 score: 5.08
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..160 score: 3.9