CSPI01G22560.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACTTTCCTCTCCTGCTTCTGCTTCTATTTCAAGGCTCTTGGTTGAGGCAAATCGACAAACATGACTCGAATGCTTACTTTCCTGTTCTGTCTCGCTTCCTTCACATTTCTTTCCATTGCCCGAGCTGACGGCAGAGCTCCTCATGGCTTGGTATATGAGAGCCCGGTGGCCTTTTCTCCAATGGCATATGATTTCTTCCATCCAAGCACTCAGAATCCCAGTGGGAAAGACCCATGTGGTGATTCCAAATGTTCCCCCCTTCCCCTTGCGGCACAAGTGCAATCCACCCCTGCAAAAGAAAGCAAATACTCCACAACGATCCAGAGCAGTAACCACCGCGTGGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGACAATGGGAGTGTACTATGTTCTACGTACACGCCAAGCCAATGCAAACCGAGCTATTGCTGCACAACCTAGCGCTTGACATGGGCAAAGCCAACATGTTTATCAGATTAGACAAACACTTCGGCACTTCACTTCTCTTCCTTTGTGTAATTCTTCACTCTTTCTTGCCATGGCTTTACATATTTATTGTTCTGTTATAGAAGTAGGAGGCTAATCTAAAGCTATCATCAAAATTTCCCTAAACTTTTCATCTTCATCCCTCCTCTCCCTCAGTGTGTAAAATCAAGTTTGTAAAATTTTTGCCCCCTTGGAGTTTCTAGATTTGCTCCTACTAATATAGCATGCAACAAATGTCAAAGAAAATCCACAATTTTGCATTGAGAGCTTTGAGAAATTAAAGCACATTCAATCAACACTGCCAAAGAATAATCAAATGAAG ATGACTCGAATGCTTACTTTCCTGTTCTGTCTCGCTTCCTTCACATTTCTTTCCATTGCCCGAGCTGACGGCAGAGCTCCTCATGGCTTGGTATATGAGAGCCCGGTGGCCTTTTCTCCAATGGCATATGATTTCTTCCATCCAAGCACTCAGAATCCCAGTGGGAAAGACCCATGTGGTGATTCCAAATGTTCCCCCCTTCCCCTTGCGGCACAAGTGCAATCCACCCCTGCAAAAGAAAGCAAATACTCCACAACGATCCAGAGCAGTAACCACCGCGTGGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGACAATGGGAGTGTACTATGTTCTACGTACACGCCAAGCCAATGCAAACCGAGCTATTGCTGCACAACCTAGCGCTTGA ATGACTCGAATGCTTACTTTCCTGTTCTGTCTCGCTTCCTTCACATTTCTTTCCATTGCCCGAGCTGACGGCAGAGCTCCTCATGGCTTGGTATATGAGAGCCCGGTGGCCTTTTCTCCAATGGCATATGATTTCTTCCATCCAAGCACTCAGAATCCCAGTGGGAAAGACCCATGTGGTGATTCCAAATGTTCCCCCCTTCCCCTTGCGGCACAAGTGCAATCCACCCCTGCAAAAGAAAGCAAATACTCCACAACGATCCAGAGCAGTAACCACCGCGTGGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGACAATGGGAGTGTACTATGTTCTACGTACACGCCAAGCCAATGCAAACCGAGCTATTGCTGCACAACCTAGCGCTTGA
BLAST of CSPI01G22560.1 vs. TrEMBL
Match: A0A0A0LV85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G495260 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 1.8e-68 Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TrEMBL
Match: A0A061GY53_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042052 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-35 Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TrEMBL
Match: U5GGS3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s22050g PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 9.7e-35 Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TrEMBL
Match: A0A0D2QDG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G107100 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 8.2e-34 Identity = 78/138 (56.52%), Postives = 100/138 (72.46%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TrEMBL
Match: K7LTE2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G067500 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.4e-33 Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TAIR10
Match: AT2G28410.1 (AT2G28410.1 unknown protein) HSP 1 Score: 95.5 bits (236), Expect = 2.7e-20 Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. TAIR10
Match: AT5G60650.1 (AT5G60650.1 unknown protein) HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15 Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. NCBI nr
Match: gi|778661360|ref|XP_011657962.1| (PREDICTED: uncharacterized protein LOC105435923 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 2.5e-68 Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. NCBI nr
Match: gi|659115379|ref|XP_008457527.1| (PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]) HSP 1 Score: 257.3 bits (656), Expect = 1.5e-65 Identity = 129/138 (93.48%), Postives = 135/138 (97.83%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. NCBI nr
Match: gi|657952768|ref|XP_008359212.1| (PREDICTED: uncharacterized protein LOC103422926 [Malus domestica]) HSP 1 Score: 159.1 bits (401), Expect = 5.7e-36 Identity = 81/133 (60.90%), Postives = 103/133 (77.44%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. NCBI nr
Match: gi|590590455|ref|XP_007016739.1| (Uncharacterized protein TCM_042052 [Theobroma cacao]) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35 Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of CSPI01G22560.1 vs. NCBI nr
Match: gi|694382081|ref|XP_009367075.1| (PREDICTED: uncharacterized protein LOC103956771 [Pyrus x bretschneideri]) HSP 1 Score: 156.4 bits (394), Expect = 3.7e-35 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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