CSPI01G17800.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G17800.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr1 : 13374624 .. 13375850 (-)
Sequence length	1227

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATATGGAAAGACAGATTGAGAATATGGAAATAAGTGAGAGGAGGATGACTATTAACTGCGGTAAAGGGCTACCGCCACTCATTGCTAAAACAATCTTCTCCAAACTCGTAATCTCCGATTTGCCCTCTTGCAGGTTGGTTTCTAATACTTGGAATGATTTGGTTTTAGATTACGCCTCCTCTACTCAGTTACAATTCCTGAAGAACGCTTTCCTTCTCTCCACCTCTGATCGGGGGCTCAATTATAAATTATGCAATCCCAAAATGCATTGTATCAATCTTGATACCAGACGACTTTCGAATGATGTTGATTTTGATCTGGAGTCGGAATTTATTAAATCAGCCTCGTTGCAATTTGATGGTGATTGGACCTATACGATCATAATGGCAGGTTCATGTAATGGTTTGATGTTTATTTCGAAATGTAGTGATTACACTTGGTGTCAAGGCATATTCAATCCCATGACCAATGAGTTCCTACAGGTTTCGGAGCATGGTACTTTTGATGATTTTTATCTCTATGGATTTGGTTTCAGCCCTATTACAAAACAATACAAATTATTCAGAGTTTTCGACAAAGGATTTAGATGTAGGAGGACATCTAGTACGGTTGACACCCACTATACAATGGAAGTTCTGACTTTTGGTAGAAGTGGAACCAACCACAGTATCCCTATTCATAACCAATGGAGGCGTCTTCACACCCTCCCTTTTGAGATTGTTGCGGATGGTGTTTACTTGAATGGAATCATCTATTGGTTGGTAAAAGAAAAAGGTAAAGATAAAGAGAAAAAGTATGTCATATATGCTCTTGATGTTGAAACTGAACATATTGAAATGACTGTTGTCTTGCAAGTTCCCTCTAACGGATATGGTAAGATACATCAATTTAATGGTACCATTTATGCAACTTTTCATATCAATTGGGAAAAAGATAGCAGGACAATTCAAGTTTGGAGGATGCAAGAGAAAGATTCATGGGTTAGAAAATTTGTTATTTGTGATATATCAAGGGAATGGATACACCTTCAGCTCATCAAAATGTTTGAAGACGAAGAAATATTATTTATGATCAATATGGACTTCTTTTGCTTCTATAATCCTTTAAGTAAGAAGAAGAGGATCATATCAAAGAATCAAAAGAAGAAGAGATATATCTGTCAAATAGAATCCTTGAATTTTGGTCGTCTGTCTCAAATTTTGGAAGGAACACAAATTTAA

mRNA sequence

ATGGAGGATATGGAAAGACAGATTGAGAATATGGAAATAAGTGAGAGGAGGATGACTATTAACTGCGGTAAAGGGCTACCGCCACTCATTGCTAAAACAATCTTCTCCAAACTCGTAATCTCCGATTTGCCCTCTTGCAGGTTGGTTTCTAATACTTGGAATGATTTGGTTTTAGATTACGCCTCCTCTACTCAGTTACAATTCCTGAAGAACGCTTTCCTTCTCTCCACCTCTGATCGGGGGCTCAATTATAAATTATGCAATCCCAAAATGCATTGTATCAATCTTGATACCAGACGACTTTCGAATGATGTTGATTTTGATCTGGAGTCGGAATTTATTAAATCAGCCTCGTTGCAATTTGATGGTGATTGGACCTATACGATCATAATGGCAGGTTCATGTAATGGTTTGATGTTTATTTCGAAATGTAGTGATTACACTTGGTGTCAAGGCATATTCAATCCCATGACCAATGAGTTCCTACAGGTTTCGGAGCATGGTACTTTTGATGATTTTTATCTCTATGGATTTGGTTTCAGCCCTATTACAAAACAATACAAATTATTCAGAGTTTTCGACAAAGGATTTAGATGTAGGAGGACATCTAGTACGGTTGACACCCACTATACAATGGAAGTTCTGACTTTTGGTAGAAGTGGAACCAACCACAGTATCCCTATTCATAACCAATGGAGGCGTCTTCACACCCTCCCTTTTGAGATTGTTGCGGATGGTGTTTACTTGAATGGAATCATCTATTGGTTGGTAAAAGAAAAAGGTAAAGATAAAGAGAAAAAGTATGTCATATATGCTCTTGATGTTGAAACTGAACATATTGAAATGACTGTTGTCTTGCAAGTTCCCTCTAACGGATATGGTAAGATACATCAATTTAATGGTACCATTTATGCAACTTTTCATATCAATTGGGAAAAAGATAGCAGGACAATTCAAGTTTGGAGGATGCAAGAGAAAGATTCATGGGTTAGAAAATTTGTTATTTGTGATATATCAAGGGAATGGATACACCTTCAGCTCATCAAAATGTTTGAAGACGAAGAAATATTATTTATGATCAATATGGACTTCTTTTGCTTCTATAATCCTTTAAGTAAGAAGAAGAGGATCATATCAAAGAATCAAAAGAAGAAGAGATATATCTGTCAAATAGAATCCTTGAATTTTGGTCGTCTGTCTCAAATTTTGGAAGGAACACAAATTTAA

Coding sequence (CDS)

ATGGAGGATATGGAAAGACAGATTGAGAATATGGAAATAAGTGAGAGGAGGATGACTATTAACTGCGGTAAAGGGCTACCGCCACTCATTGCTAAAACAATCTTCTCCAAACTCGTAATCTCCGATTTGCCCTCTTGCAGGTTGGTTTCTAATACTTGGAATGATTTGGTTTTAGATTACGCCTCCTCTACTCAGTTACAATTCCTGAAGAACGCTTTCCTTCTCTCCACCTCTGATCGGGGGCTCAATTATAAATTATGCAATCCCAAAATGCATTGTATCAATCTTGATACCAGACGACTTTCGAATGATGTTGATTTTGATCTGGAGTCGGAATTTATTAAATCAGCCTCGTTGCAATTTGATGGTGATTGGACCTATACGATCATAATGGCAGGTTCATGTAATGGTTTGATGTTTATTTCGAAATGTAGTGATTACACTTGGTGTCAAGGCATATTCAATCCCATGACCAATGAGTTCCTACAGGTTTCGGAGCATGGTACTTTTGATGATTTTTATCTCTATGGATTTGGTTTCAGCCCTATTACAAAACAATACAAATTATTCAGAGTTTTCGACAAAGGATTTAGATGTAGGAGGACATCTAGTACGGTTGACACCCACTATACAATGGAAGTTCTGACTTTTGGTAGAAGTGGAACCAACCACAGTATCCCTATTCATAACCAATGGAGGCGTCTTCACACCCTCCCTTTTGAGATTGTTGCGGATGGTGTTTACTTGAATGGAATCATCTATTGGTTGGTAAAAGAAAAAGGTAAAGATAAAGAGAAAAAGTATGTCATATATGCTCTTGATGTTGAAACTGAACATATTGAAATGACTGTTGTCTTGCAAGTTCCCTCTAACGGATATGGTAAGATACATCAATTTAATGGTACCATTTATGCAACTTTTCATATCAATTGGGAAAAAGATAGCAGGACAATTCAAGTTTGGAGGATGCAAGAGAAAGATTCATGGGTTAGAAAATTTGTTATTTGTGATATATCAAGGGAATGGATACACCTTCAGCTCATCAAAATGTTTGAAGACGAAGAAATATTATTTATGATCAATATGGACTTCTTTTGCTTCTATAATCCTTTAAGTAAGAAGAAGAGGATCATATCAAAGAATCAAAAGAAGAAGAGATATATCTGTCAAATAGAATCCTTGAATTTTGGTCGTCTGTCTCAAATTTTGGAAGGAACACAAATTTAA

Homology

[Close]

BLAST of CSPI01G17800.1 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 4.3e-240
Identity = 404/408 (99.02%), Postives = 405/408 (99.26%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTR+LSND DFDLESEFIKSASLQ
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQ 120

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           FDGDWTYTIIMAGSCNGLM ISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF
Sbjct: 121 FDGDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180

Query: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240
           SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF
Sbjct: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240

Query: 241 EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN 300
           EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN
Sbjct: 241 EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN 300

Query: 301 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI 360
           GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI
Sbjct: 301 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI 360

Query: 361 NMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           NMDFFCFYNP SKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI
Sbjct: 361 NMDFFCFYNPSSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 408

[Close]

BLAST of CSPI01G17800.1 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 1.8e-174
Identity = 308/413 (74.58%), Postives = 349/413 (84.50%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           ME++ERQ+ENME+ ERRM+I+ GKGLPPLIAKTIFSKLVIS+LPSCR V  TWN LVL Y
Sbjct: 17  MENVERQMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHY 76

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFL NAFLLSTSDR LNY+LCNPKMHCINLD R+ SNDVDFDLE EFIKS SLQ
Sbjct: 77  ASSTQLQFLTNAFLLSTSDRMLNYELCNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 136

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           F GDWT+ I++A  CNGLMFISKCSDYTWCQGIFNPMTNEF QVSE  TFDDFY YGFG 
Sbjct: 137 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGL 196

Query: 181 SPITKQYKLFRV-----FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRL 240
           S I+KQYKLFRV     + + FR   T    DTHYTMEVLTFGRSGTNH IPIHNQWR L
Sbjct: 197 SAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNH-IPIHNQWRHL 256

Query: 241 HTLPFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGK 300
           H L  +++  GVYLNGIIYWL KEKGK ++K+YVIYALDVETE IEM+V+LQV ++  GK
Sbjct: 257 HNLSCDLI-HGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQVQASD-GK 316

Query: 301 IHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEE 360
           +H FNGTIYA F+INWEKDSRTIQVW MQEK SW+R+FVI DIS+EW  L+LIK+FED E
Sbjct: 317 MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGE 376

Query: 361 ILFMINMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           ILF+I+ DFFCFY+PL++KKRIISKNQKK R++CQIE LNFG L +ILEGT +
Sbjct: 377 ILFLIDSDFFCFYHPLTEKKRIISKNQKKNRFVCQIECLNFGSLPEILEGTSL 426

[Close]

BLAST of CSPI01G17800.1 vs. TrEMBL
Match: A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 2.5e-155
Identity = 286/416 (68.75%), Postives = 328/416 (78.85%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           ME++ERQ+ENME+ ERRM+I+ GKGLPPLIAK IFSKLVIS+LPSCR V  TWN LVL Y
Sbjct: 17  MENVERQMENMEMGERRMSIDWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHY 76

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFL NAFLLSTSD+ LNY+LCNPKMH INLD  + S+DV  DLE EFIKS S Q
Sbjct: 77  ASSTQLQFLTNAFLLSTSDQMLNYELCNPKMHSINLDNTQCSDDV--DLEMEFIKSGSFQ 136

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           F GDWT+ I+MA  CNGL+FISKCSDYTWCQGIFNPMTNEF QVSE  TFDDFY YGFG 
Sbjct: 137 FYGDWTFMILMAHPCNGLVFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGL 196

Query: 181 SPITKQYKLFRV-----FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRL 240
           SP+TKQYKLFR      + K FR   T ST DTHY MEVLTFGRSGTNH IPIHNQWR L
Sbjct: 197 SPVTKQYKLFRTSKAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNH-IPIHNQWRHL 256

Query: 241 HTLPFEIVA--DGVYLNGIIY-WLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNG 300
           H L ++IV    GVYLNGII+ W  ++K   +++KY IYALD ETE IEM+V+LQV +  
Sbjct: 257 HNLSYDIVVGDGGVYLNGIIFGW--EKKNVKRKRKYDIYALDDETEQIEMSVILQVHARD 316

Query: 301 YGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFE 360
            GK+H FNGTIYATF+ NWEKD  T+QVW MQEK SW+RKFVI DIS++W  L+LIKMF+
Sbjct: 317 -GKMHLFNGTIYATFYTNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFK 376

Query: 361 DEEILFMINMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           D +I      DFF FYNPL+KKK IISK+QKKK  +CQIE LNFG L +I +GT +
Sbjct: 377 DGDI-----SDFFYFYNPLTKKKSIISKDQKKKSCVCQIECLNFGSLPKIFDGTNL 421

[Close]

BLAST of CSPI01G17800.1 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.5e-72
Identity = 179/396 (45.20%), Postives = 239/396 (60.35%), Query Frame = 1


Query: 25  GLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLSTSDRGLNY 84
           GLP  I KTIFSKL++S+LP+CR+V   WN+L+LD+ASS   +FL N F+L T D  L+ 
Sbjct: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCD-VLHP 68

Query: 85  KLC-----NPKMHCINLDTRRLSNDVDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLM 144
             C     NP MHC+  D   L  D+D DLE E  KS+S  F+    Y +I   SCNGL+
Sbjct: 69  FPCPDNHTNPNMHCLRFD--NLDLDLDLDLELEVNKSSS--FEAGVVYKLI--NSCNGLL 128

Query: 145 FISKC-----SDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRV-F 204
            I K       ++    GIFNPMTNEF QV      +  Y YGFGF P TKQYKLFRV F
Sbjct: 129 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNF 188

Query: 205 DKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGII 264
               R    +S   +H  ++VLTFGRS      P  +QWRRL++LP  +   G ++NG+I
Sbjct: 189 PLNVRPEEPNSV--SH--LDVLTFGRSEIID--PKQSQWRRLYSLPGGVENHGAHVNGVI 248

Query: 265 YWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEK 324
           YWL + K   ++ +YV+Y LDVETE I+++ VL+V +  +  I QFNGT+YA FH+    
Sbjct: 249 YWLGEGK---EQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHM---- 308

Query: 325 DSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPLSK 384
                QVWRMQEK+SW+R FVI D      +L L+K +E+ E+L M+    F  YNP + 
Sbjct: 309 -EEATQVWRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEMLCMVKPTVFWLYNPSTG 368

Query: 385 KKRIISKNQKKKRY--ICQIESLNFGRLSQILEGTQ 408
            K+++S   +KK +  IC +E LNFG L  IL G +
Sbjct: 369 SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGDE 374

[Close]

BLAST of CSPI01G17800.1 vs. TrEMBL
Match: A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.9e-70
Identity = 185/427 (43.33%), Postives = 250/427 (58.55%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVIS+LP CRLV  TWN +VLDY
Sbjct: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDY 60

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNY------KLCNPKMHCINLDTRRLSNDVDFDLESEFI 120
           AS+TQ Q L  A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+SE +
Sbjct: 61  ASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELM 120

Query: 121 KSASLQFDGDWTYTIIMAGSCNGLMF-ISKCSDY--TWCQGIFNPMTNEFLQVSEHGTFD 180
           KS SL FDG+W+  II    CNGL++ I+   +Y   +  GIFNPMTNEF+Q+  H  + 
Sbjct: 121 KSPSLLFDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY- 180

Query: 181 DFYLYGFGFSPITKQYKLFRV---FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPI 240
            + + GFG    TKQYKLFRV   F +G   R+          M+VL FG          
Sbjct: 181 GYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGME-------MDVLRFGND-------- 240

Query: 241 HNQWRRLHTL--PFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVL 300
            N+WR L  L  P  +     YLNG+IYWL K + K+ E   VI+A DVETE  E + +L
Sbjct: 241 -NKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENE--VVIHAFDVETEKFESSTIL 300

Query: 301 QV--PSNGYGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRK-FVICDISREWI 360
            V         +++F  TIYATF I    DS  IQVW+MQEK SW+ +  V+ DI   W 
Sbjct: 301 DVGLVDQESLNLYKFKETIYATF-IEMTYDS--IQVWKMQEKGSWIPEVLVMDDIPNHWR 360

Query: 361 HLQLIKMFEDEE-ILFMINMDFFCFYNPL--SKKKRIISKNQKKKRY--ICQIESLNFGR 406
            L +I+  ED E IL M+N  FFCFYN +   ++K++I + ++K R+  I +IESLNFG 
Sbjct: 361 DLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGS 397

[Close]

BLAST of CSPI01G17800.1 vs. TAIR10
Match: AT1G47350.1 (AT1G47350.1 F-box associated ubiquitination effector family protein)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08
Identity = 62/255 (24.31%), Postives = 108/255 (42.35%), Query Frame = 1


Query: 88  NPKMHCINLDTRRLSNDVDFDLESEFIKSASLQFDGDWTYTI----IMAGSCNGLMFIS- 147
           NP+ HC+     RL    +F ++           DG   Y         G  +G+M+   
Sbjct: 144 NPRRHCV-----RLLETAEFHMK--------FPPDGMQIYPRNDRRFSCGYASGMMYFYG 203

Query: 148 ---KCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRVFDKGFRC 207
              K  DY     + NP+T  +  +     F   + + FG+ PI KQ+K+       F  
Sbjct: 204 MRIKEDDYDGVPVLCNPITGHYATLPAIARFRQAFSF-FGYDPIDKQFKVL------FMI 263

Query: 208 RRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRL-HTLPFEIVADGVYLNGIIYWLVK 267
                + D H   +VL  G    +        WRRL  TL  EI+++G+ +NG++Y+L  
Sbjct: 264 MAYPCSPDHH---KVLKLGSGEMS--------WRRLKRTLRHEIMSEGICINGVVYYL-- 323

Query: 268 EKGKDKE--KKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEKDSR 327
             G   E    +V+   DV  E    T     P + Y ++  + G +   F+ +++ D+ 
Sbjct: 324 --GDTSEVLTSFVVVCFDVRYE----TFSFLYPGS-YCELINYKGKLGLVFYDDYDGDTI 358

Query: 328 TIQVWRM--QEKDSW 330
            +++W +  +EK+ W
Sbjct: 384 KLRLWVLEDEEKNEW 358

[Close]

BLAST of CSPI01G17800.1 vs. TAIR10
Match: AT3G06240.1 (AT3G06240.1 F-box family protein)

HSP 1 Score: 52.8 bits (125), Expect = 6.0e-07
Identity = 50/221 (22.62%), Postives = 90/221 (40.72%), Query Frame = 1


Query: 99  RRLSNDVDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMT 158
           R    D  +D     +K  +  +  +W   + + GS NGL+ IS      +   ++NP T
Sbjct: 136 RNYVGDHLYDDRRVMLKLNAKSYRRNW---VEIVGSSNGLVCISPGEGAVF---LYNPTT 195

Query: 159 NEFLQVSEHGT-------FDDFYLYGFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYT 218
            +  ++ E+          D+F  YGFGF  +T  YKL ++         TS  +     
Sbjct: 196 GDSKRLPENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLV-------ATSEDI----- 255

Query: 219 MEVLTFGRSGTNHSIPIHNQWRRLHTLPFE----IVADGVYLNGIIYWLVKEKGKDKEKK 278
           ++   +            + WRR+  L +E        GV+ NG I+W+  E    +  +
Sbjct: 256 LDASVYSLKA--------DSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFTE---SRHNQ 315

Query: 279 YVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFH 309
            V+ A D++TE       + VP       H+F+  +  + +
Sbjct: 316 RVVVAFDIQTEEFR---EMPVPDEAEDCSHRFSNFVVGSLN 324

[Close]

BLAST of CSPI01G17800.1 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 838.2 bits (2164), Expect = 6.2e-240
Identity = 404/408 (99.02%), Postives = 405/408 (99.26%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTR+LSND DFDLESEFIKSASLQ
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQ 120

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           FDGDWTYTIIMAGSCNGLM ISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF
Sbjct: 121 FDGDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180

Query: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240
           SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF
Sbjct: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240

Query: 241 EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN 300
           EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN
Sbjct: 241 EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFN 300

Query: 301 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI 360
           GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI
Sbjct: 301 GTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMI 360

Query: 361 NMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           NMDFFCFYNP SKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI
Sbjct: 361 NMDFFCFYNPSSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 408

[Close]

BLAST of CSPI01G17800.1 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 620.2 bits (1598), Expect = 2.7e-174
Identity = 308/413 (74.58%), Postives = 349/413 (84.50%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           ME++ERQ+ENME+ ERRM+I+ GKGLPPLIAKTIFSKLVIS+LPSCR V  TWN LVL Y
Sbjct: 17  MENVERQMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHY 76

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFL NAFLLSTSDR LNY+LCNPKMHCINLD R+ SNDVDFDLE EFIKS SLQ
Sbjct: 77  ASSTQLQFLTNAFLLSTSDRMLNYELCNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 136

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           F GDWT+ I++A  CNGLMFISKCSDYTWCQGIFNPMTNEF QVSE  TFDDFY YGFG 
Sbjct: 137 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGL 196

Query: 181 SPITKQYKLFRV-----FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRL 240
           S I+KQYKLFRV     + + FR   T    DTHYTMEVLTFGRSGTNH IPIHNQWR L
Sbjct: 197 SAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNH-IPIHNQWRHL 256

Query: 241 HTLPFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGK 300
           H L  +++  GVYLNGIIYWL KEKGK ++K+YVIYALDVETE IEM+V+LQV ++  GK
Sbjct: 257 HNLSCDLI-HGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQVQASD-GK 316

Query: 301 IHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEE 360
           +H FNGTIYA F+INWEKDSRTIQVW MQEK SW+R+FVI DIS+EW  L+LIK+FED E
Sbjct: 317 MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGE 376

Query: 361 ILFMINMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           ILF+I+ DFFCFY+PL++KKRIISKNQKK R++CQIE LNFG L +ILEGT +
Sbjct: 377 ILFLIDSDFFCFYHPLTEKKRIISKNQKKNRFVCQIECLNFGSLPEILEGTSL 426

[Close]

BLAST of CSPI01G17800.1 vs. NCBI nr
Match: gi|700208650|gb|KGN63746.1| (hypothetical protein Csa_1G014430 [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 3.6e-155
Identity = 286/416 (68.75%), Postives = 328/416 (78.85%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           ME++ERQ+ENME+ ERRM+I+ GKGLPPLIAK IFSKLVIS+LPSCR V  TWN LVL Y
Sbjct: 17  MENVERQMENMEMGERRMSIDWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHY 76

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFL NAFLLSTSD+ LNY+LCNPKMH INLD  + S+DV  DLE EFIKS S Q
Sbjct: 77  ASSTQLQFLTNAFLLSTSDQMLNYELCNPKMHSINLDNTQCSDDV--DLEMEFIKSGSFQ 136

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           F GDWT+ I+MA  CNGL+FISKCSDYTWCQGIFNPMTNEF QVSE  TFDDFY YGFG 
Sbjct: 137 FYGDWTFMILMAHPCNGLVFISKCSDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGL 196

Query: 181 SPITKQYKLFRV-----FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRL 240
           SP+TKQYKLFR      + K FR   T ST DTHY MEVLTFGRSGTNH IPIHNQWR L
Sbjct: 197 SPVTKQYKLFRTSKAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNH-IPIHNQWRHL 256

Query: 241 HTLPFEIVA--DGVYLNGIIY-WLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNG 300
           H L ++IV    GVYLNGII+ W  ++K   +++KY IYALD ETE IEM+V+LQV +  
Sbjct: 257 HNLSYDIVVGDGGVYLNGIIFGW--EKKNVKRKRKYDIYALDDETEQIEMSVILQVHARD 316

Query: 301 YGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFE 360
            GK+H FNGTIYATF+ NWEKD  T+QVW MQEK SW+RKFVI DIS++W  L+LIKMF+
Sbjct: 317 -GKMHLFNGTIYATFYTNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFK 376

Query: 361 DEEILFMINMDFFCFYNPLSKKKRIISKNQKKKRYICQIESLNFGRLSQILEGTQI 409
           D +I      DFF FYNPL+KKK IISK+QKKK  +CQIE LNFG L +I +GT +
Sbjct: 377 DGDI-----SDFFYFYNPLTKKKSIISKDQKKKSCVCQIECLNFGSLPKIFDGTNL 421

[Close]

BLAST of CSPI01G17800.1 vs. NCBI nr
Match: gi|778665047|ref|XP_011648473.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus])

HSP 1 Score: 537.3 bits (1383), Expect = 2.3e-149
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 1


Query: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60
           MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFIKSASLQ 120
           ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTR+LSND DFDLESEFIKSASLQ
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQ 120

Query: 121 FDGDWTYTIIMAGSCNGLMFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180
           FDGDWTYTIIMAGSCNGLM ISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF
Sbjct: 121 FDGDWTYTIIMAGSCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGF 180

Query: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240
           SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF
Sbjct: 181 SPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPF 240

Query: 241 EIVADGVYLNGIIYWLVKEK 261
           EIVADGVYLNGIIYWLVKEK
Sbjct: 241 EIVADGVYLNGIIYWLVKEK 260

[Close]

BLAST of CSPI01G17800.1 vs. NCBI nr
Match: gi|659120418|ref|XP_008460183.1| (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 196/393 (49.87%), Postives = 250/393 (63.61%), Query Frame = 1


Query: 23  GKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYA---SSTQLQFLKNAFLLSTSD 82
           G+GLP  I + I   +VIS+ P+ R+VS TWN  +LDYA   SST      NAFLLST D
Sbjct: 7   GRGLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNA----NAFLLSTCD 66

Query: 83  RGLNYKLCNPKMHCINLDTRRLSNDVDFDLESEFI-KSASLQFDGDWTYTIIMAGSCNGL 142
           R  N K  N KMHCI  DT   +  +DFDLESE+  KS SL FDGDW +  ++  SCNGL
Sbjct: 67  RTPNNKDLNHKMHCIRFDT---TTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGL 126

Query: 143 MFISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRVFDKGFR 202
           +FI KC+ +T C GIFNPMTNEF Q+       D Y Y  GFSP TKQYKLFRV +  F 
Sbjct: 127 VFICKCAFFTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFF- 186

Query: 203 CRRTSSTVDTHYTMEVLTF-GRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGIIYWLV 262
                   +    M+VLTF  RS TNH+   H+QWRRLH+LP  I  +G YLNG+IYW+ 
Sbjct: 187 --LDGDADNNSSIMDVLTFTRRSETNHN---HSQWRRLHSLPLRI-HNGAYLNGVIYWIG 246

Query: 263 KEKGKDKEKKYVIYALDVETEHIEMTVVLQV---PSNGYGKIHQFNGTIYATFHINWEKD 322
            +  +DKE +Y+IYA++VETE IE++ +L +    ++ +  + QFN ++YATF IN +  
Sbjct: 247 TK--EDKENEYIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTY 306

Query: 323 SRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPLSKK 382
           + +IQVWRMQEKD W+R+FVI DI   W  L LIK FED EIL+               +
Sbjct: 307 NSSIQVWRMQEKDLWIREFVIVDIPINWSSLTLIKAFEDGEILW---------------R 366

Query: 383 KRIISKNQKKKRYICQIESLNFGRLSQILEGTQ 408
           K+I++KNQKK R +CQIE LNFG L  IL G +
Sbjct: 367 KKIVTKNQKKDRRVCQIEYLNFGLLQNILAGEE 368

The following BLAST results are available for this feature:

BLAST of CSPI01G17800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G17800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWG1_CUCSA	4.3e-240	99.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	1.8e-174	74.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LUP7_CUCSA	2.5e-155	68.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1	[more]
A0A0A0LSE0_CUCSA	3.5e-72	45.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]
A0A0A0LRY6_CUCSA	1.9e-70	43.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1	[more]

BLAST of CSPI01G17800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47350.1	1.1e-08	24.31	F-box associated ubiquitination effector family protein	[more]
AT3G06240.1	6.0e-07	22.62	F-box family protein	[more]

BLAST of CSPI01G17800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210076\|gb\|KGN65172.1\|	6.2e-240	99.02	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]
gi\|700208649\|gb\|KGN63745.1\|	2.7e-174	74.58	hypothetical protein Csa_1G014420 [Cucumis sativus]	[more]
gi\|700208650\|gb\|KGN63746.1\|	3.6e-155	68.75	hypothetical protein Csa_1G014430 [Cucumis sativus]	[more]
gi\|778665047\|ref\|XP_011648473.1\|	2.3e-149	98.85	PREDICTED: F-box protein At3g07870-like [Cucumis sativus]	[more]
gi\|659120418\|ref\|XP_008460183.1\|	1.4e-90	49.87	PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G17800	CSPI01G17800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G17800.1	CSPI01G17800.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G17800.1.cds1	CSPI01G17800.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 26..57 score: 1.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 25..98 score: 1.5
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 134..360 score: 4.1
None	No IPR available	unknown	Coil	Coil	coord: 1..21 scor
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 16..59 score: 3.
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 1..378 score: 1.0