CSPI01G17540.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G17540.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Basic helix-loop-helix transcription factor
Location	Chr1 : 13181365 .. 13184674 (+)
Sequence length	1269

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATGAGGGGGTGGTGAGAAACCAAAGGTGGTGTGTGCCAGAGAGAAGCTCCAGCTTTTGCTATTTAATAACCAAACACACAAAAAACCAAACTCTTAAAAACAAAAACCCATTCCCCATACCGATTACCAAATTTCATATATATATAAAACATTATAATTTATATATTCCATACCCCTCCTCCATCTCCGTCCACCTTCTCCCCGCCGGACACTATGCAGCCCTGTAGCAGAGAAATGCAATCCCTCAACTCTCTCTTAAACCACTCCCAAATATCTCTCCAAGACCTCCATGCCGACCACCATTTGAATCCCCCACCGCCCCAGATCCCTCCCTCTCACTTCCACCATTTTGATCCCTCCGCCGCTTCCAACGACGACTTCCTCGAACAAATGCTCAACACAATCCCTTCCTGTTCTTGGCCTGACCTCAACCCTTCAAACCCTAAATCCCCTTGGGACCTTAACCCCATTAATAAACCCTCTAGAGATATCTCCGATGATCCTCACCAGAATCACCTCACTGCTACTTCTCCCGCCGCTAAGGCCGCCGTTATGCTTCAACAACAGCTTCTCTTGTCCAGAGGAATGTCTGGCTCTGCCGGAAATGGCGTTGCAGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTGGAAATGCCGACTTGGATCGCTCCCAAAACGACGTCGTTGATGGATCCTGTTTCCGCCCACCGAACTCGGTTTGTTCTGTGATGGATCTGTCAATTCCTCGCCGGTGGATTCCAGTTTTTAATTAACTCTGTTTTTTTCCCCCTCAGGGTGGTTCTCTTCAATCGAATAGTTTTGGAGCTCCGGGAAACGTGATGAATCAAACTCCAGGAGGTGGGTCTGCCGGAGTTTCTCAATCTCAACCAAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCGACTGACCCACACAGTATTGCCGAAAGGGTAAAACCAAAACTCCTTCCCCATAAATCTTCAACTCTCTGTTTTACTAAACCCAACACAAAACCGAATCATTCTCATTTCTCAGTATTTTTCCATTCCATTTTCTCACGTTTTCCAAGGAATCAAACAGAAACCAAATCAGGGTCTTCGTCTATTAATCTCAAGAAATTGATGTTCGCAAATTTGTCTTGTTTGTACAGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCTCTGCAAGAACTCGTTCCCAATGCAAACAAGGTCAGTGTTCCTTCCTTCCTTCATCTTCGTCACATCTTCCATTTTTCTTTTTTCTAAATATAAATTAATTAAATTATTAATCCCAAAATTTTGTTAAAAAGAAAAAAAGAGTCCGGAGTGTAGCAGCTCCGAACCTCTTTGCAAGACTGTAACCGCCGGTCAGTTTTGTACCTTCCTTGTAATTAAACCAAATGATCAAGGGCAATACAGTCACTGCCCTTCCGGTGAGAAACTAATCTCACGGAAATTCCGTGACACGTGTCGACAGTATAACATGGCAGTTACTAACAAAATGAGAAGCATGTTAAATATTAGCAACGCCTCCGTTTTCTAAAACATGTACTTTGGAAAATGGAATATTTATGTGAATATATAGTAATAAATAGCAAAATTAATAATCATAATTTATTTATTATATATATGAATCTGAAAGGGTTATGGAATTTCAGACGGATAAAGCTTCGATGCTTGATGAGATCATCGACTACGTTAAATTCCTCCAGCTCCAAGTCAAGGTATGACTCTAAATTCAACCCCATATTTATTTTGTTATTTTATTATAATTATGAAATATGATTGAATTGTTATTGTTATTTTATATATATAAAAGATTCCCTGAATGGAAGAATTATTAGTTTAAAATTTGTTATTTGTATTTGGTGTAGGTTCTGAGCATGAGCAGATTGGGGGGTGCAGCTGCTGTGGCTCCTCTAGTCGCTGACGTCTCCTCTGAGGTAAATAAATAAGTATTATAACCTTTTTTTTTTCTTTAGTTGAAGAGATAAATATGTAAAGTTTAATTAGTTCAATCAAATTAAACCCCCGATTTAGATAACAATTGTAATTTGAACTTGAAAGTTAAGTGATTGCAATTTGATATTAAAGGGTGATTTTCTTCTGAATTTGAGTTATATAATAATTAATGAAAGTAAGGAGTTTAGGAAGATTGTAACATTATTATTTTTATATAAAAGTAAGGGTGGAAGATGGAAAGTATTAATTCAGGTTTAGGGTTTAATTGATTAAAAATAGAGAGAGAGAGAGAGAGAGAGAGATATGAGTTAAAGTGGATGAGGCGGCCAAAAATTCCTTTAAGGGAAGAGGACAAAAGGAAAAGGGGAGCACGCGTGCGAAGGCTTTTATCAGCTTTTGGTTTCCCACTCCTTTTCAATTGAAATGACAACAAACAAAGAAAATTAAATAATATTTAATCATTTGGTAATTAGTAAATAATATTACTGATAACAACAACAATGAACAAACGGTGTGGTTTCAGGGTGGGGGTGAGTGCATGCAAGGAAGTGGAGCCCAAGCTGGTGGTCGGAATTCCAACAATAATGGCAACGGCGGAAACCAAACTGCCTCGACCAACGATAGCATGACGGTGACGGAGCAGCAAGTGGCAAAGCTAATGGAGAAAGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGGCTTTGTCTTATGCCCATATCTCTAGCAACTGCGATCTCTACGTCCACCTGTCACTCCAGGAATCCCTTGATGAACGGCGGCGGCGGTGGCGGTGGGAGTCAACATCCCGTGATGGGATCCAACGGTGAAGGGCCATCGTCGCCGAGTATGTCGGTGCTGACTGTGCAATCGACGAGCATGGGGAACGGCTCCGTCAAGGACGCCGCCTCCGTATCAAAGCCGTGAAGACGGCGGCGCGTGGAGAATTGACTTTTTGATTTTAAAAAGAAAAGGAGTAAACTTTTGTAGAAGTCTACGAAAATAAGGCAAGTCTTGTAATACGGCGCCGTATTCTCGTAGACTTTTATTTGGCCTACAAACCCTAACATAAAAAGTAAAAGAAGAAAAAACTCTAAAAAAGCAAAGGTAAAGGCAAAGGCAAAGGCAAAGGAAGCACATCCTCTCCTTCTGACATCAAAAGCCTTTCCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTATTTTTACATTACAATTATTGTCTTTTTCTTTTCCTTTTCCTTTTCCTTTAACTACTTGTTGACTCAATGGTTTGTGTTCTAATTCAGTAATTAATTACTAATTAAATTAGAGATAGTTTTGTTT

mRNA sequence

ATGCAGCCCTGTAGCAGAGAAATGCAATCCCTCAACTCTCTCTTAAACCACTCCCAAATATCTCTCCAAGACCTCCATGCCGACCACCATTTGAATCCCCCACCGCCCCAGATCCCTCCCTCTCACTTCCACCATTTTGATCCCTCCGCCGCTTCCAACGACGACTTCCTCGAACAAATGCTCAACACAATCCCTTCCTGTTCTTGGCCTGACCTCAACCCTTCAAACCCTAAATCCCCTTGGGACCTTAACCCCATTAATAAACCCTCTAGAGATATCTCCGATGATCCTCACCAGAATCACCTCACTGCTACTTCTCCCGCCGCTAAGGCCGCCGTTATGCTTCAACAACAGCTTCTCTTGTCCAGAGGAATGTCTGGCTCTGCCGGAAATGGCGTTGCAGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTGGAAATGCCGACTTGGATCGCTCCCAAAACGACGTCGTTGATGGATCCTGTTTCCGCCCACCGAACTCGGGTGGTTCTCTTCAATCGAATAGTTTTGGAGCTCCGGGAAACGTGATGAATCAAACTCCAGGAGGTGGGTCTGCCGGAGTTTCTCAATCTCAACCAAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCGACTGACCCACACAGTATTGCCGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCTCTGCAAGAACTCGTTCCCAATGCAAACAAGACGGATAAAGCTTCGATGCTTGATGAGATCATCGACTACGTTAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGGGGTGCAGCTGCTGTGGCTCCTCTAGTCGCTGACGTCTCCTCTGAGGGTGGGGGTGAGTGCATGCAAGGAAGTGGAGCCCAAGCTGGTGGTCGGAATTCCAACAATAATGGCAACGGCGGAAACCAAACTGCCTCGACCAACGATAGCATGACGGTGACGGAGCAGCAAGTGGCAAAGCTAATGGAGAAAGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGGCTTTGTCTTATGCCCATATCTCTAGCAACTGCGATCTCTACGTCCACCTGTCACTCCAGGAATCCCTTGATGAACGGCGGCGGCGGTGGCGGTGGGAGTCAACATCCCGTGATGGGATCCAACGGTGAAGGGCCATCGTCGCCGAGTATGTCGGTGCTGACTGTGCAATCGACGAGCATGGGGAACGGCTCCGTCAAGGACGCCGCCTCCGTATCAAAGCCGTGA

Coding sequence (CDS)

ATGCAGCCCTGTAGCAGAGAAATGCAATCCCTCAACTCTCTCTTAAACCACTCCCAAATATCTCTCCAAGACCTCCATGCCGACCACCATTTGAATCCCCCACCGCCCCAGATCCCTCCCTCTCACTTCCACCATTTTGATCCCTCCGCCGCTTCCAACGACGACTTCCTCGAACAAATGCTCAACACAATCCCTTCCTGTTCTTGGCCTGACCTCAACCCTTCAAACCCTAAATCCCCTTGGGACCTTAACCCCATTAATAAACCCTCTAGAGATATCTCCGATGATCCTCACCAGAATCACCTCACTGCTACTTCTCCCGCCGCTAAGGCCGCCGTTATGCTTCAACAACAGCTTCTCTTGTCCAGAGGAATGTCTGGCTCTGCCGGAAATGGCGTTGCAGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTGGAAATGCCGACTTGGATCGCTCCCAAAACGACGTCGTTGATGGATCCTGTTTCCGCCCACCGAACTCGGGTGGTTCTCTTCAATCGAATAGTTTTGGAGCTCCGGGAAACGTGATGAATCAAACTCCAGGAGGTGGGTCTGCCGGAGTTTCTCAATCTCAACCAAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCGACTGACCCACACAGTATTGCCGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCTCTGCAAGAACTCGTTCCCAATGCAAACAAGACGGATAAAGCTTCGATGCTTGATGAGATCATCGACTACGTTAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGGGGTGCAGCTGCTGTGGCTCCTCTAGTCGCTGACGTCTCCTCTGAGGGTGGGGGTGAGTGCATGCAAGGAAGTGGAGCCCAAGCTGGTGGTCGGAATTCCAACAATAATGGCAACGGCGGAAACCAAACTGCCTCGACCAACGATAGCATGACGGTGACGGAGCAGCAAGTGGCAAAGCTAATGGAGAAAGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGGCTTTGTCTTATGCCCATATCTCTAGCAACTGCGATCTCTACGTCCACCTGTCACTCCAGGAATCCCTTGATGAACGGCGGCGGCGGTGGCGGTGGGAGTCAACATCCCGTGATGGGATCCAACGGTGAAGGGCCATCGTCGCCGAGTATGTCGGTGCTGACTGTGCAATCGACGAGCATGGGGAACGGCTCCGTCAAGGACGCCGCCTCCGTATCAAAGCCGTGA

Homology

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BLAST of CSPI01G17540.1 vs. Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.0e-61
Identity = 160/278 (57.55%), Postives = 182/278 (65.47%), Query Frame = 1


Query: 165 PPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQ---KVRARRGQATDPHSIAERL 224
           P  SGG L +           Q     + G + + P Q   K+RARRGQATDPHSIAERL
Sbjct: 96  PQGSGGGLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERL 155

Query: 225 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV 284
           RRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+V+  +
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI 215

Query: 285 ADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAM 344
               SE GG     S A  GG  +  N         +NDS+T+TE QVAKLME+DMGSAM
Sbjct: 216 ----SEAGGSHGNASSAMVGGSQTAGN---------SNDSVTMTEHQVAKLMEEDMGSAM 275

Query: 345 QYLQGKGLCLMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVL 404
           QYLQGKGLCLMPISLATAIST+TCHSRNPL+ G     G           GPS P++S +
Sbjct: 276 QYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVG-----------GPSPPNLSGM 335

Query: 405 TVQSTS--MGNG----------------SVKDAASVSK 422
           T+QSTS  MG+G                +VK+A SVSK
Sbjct: 336 TIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSK 349

[Close]

BLAST of CSPI01G17540.1 vs. Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-55
Identity = 144/237 (60.76%), Postives = 166/237 (70.04%), Query Frame = 1


Query: 139 PPMPLSLGNA-DLDRSQNDVVDGSCFRPPNSGGSLQSNSFGA-PGNVMNQTPGGGSAGVS 198
           PP P SL +A  +D    D        P  SGG    +  G  P   ++ T    SA V 
Sbjct: 42  PPPPQSLFHALAVDAPFPD----QFHHPQESGGPTMGSQEGLQPQGTVSTT----SAPVV 101

Query: 199 QSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYV 258
           + +P+  VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEII+YV
Sbjct: 102 RQKPR--VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYV 161

Query: 259 KFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTA 318
           +FLQLQVKVLSMSRLGGA +V P +  +S+E GG  +    A   G N N     GN T 
Sbjct: 162 RFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGR-LNALTAPCNGLNGN-----GNATG 221

Query: 319 STNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPLMN 374
           S+N+S+  TEQ+VAKLME+DMGSAMQYLQGKGLCLMPISLATAIS+ST HSR  L N
Sbjct: 222 SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of CSPI01G17540.1 vs. Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 214.2 bits (544), Expect = 2.8e-54
Identity = 148/262 (56.49%), Postives = 168/262 (64.12%), Query Frame = 1


Query: 165 PPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRE 224
           P  SGG  Q+ S        + T GG +A   Q Q K KVRARRGQATDPHSIAERLRRE
Sbjct: 98  PQGSGGQTQTQSQATA----SATTGGATA---QPQTKPKVRARRGQATDPHSIAERLRRE 157

Query: 225 RIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADV 284
           RIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+ +  +++ 
Sbjct: 158 RIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISE- 217

Query: 285 SSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYL 344
                          AGG + N + +G            +TE QVAKLME+DMGSAMQYL
Sbjct: 218 --------------DAGGSHENTSSSG---------EAKMTEHQVAKLMEEDMGSAMQYL 277

Query: 345 QGKGLCLMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQ 404
           QGKGLCLMPISLAT IST+TC SR+P +   G                P SP++S   V 
Sbjct: 278 QGKGLCLMPISLATTISTATCPSRSPFVKDTG---------------VPLSPNLSTTIVA 310

Query: 405 STSMGNGS----VKDAASVSKP 423
           +   GNGS    VKDA SVSKP
Sbjct: 338 N---GNGSSLVTVKDAPSVSKP 310

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BLAST of CSPI01G17540.1 vs. Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-41
Identity = 127/260 (48.85%), Postives = 154/260 (59.23%), Query Frame = 1


Query: 124 GMSGSAGNGVADHGLPPMPLSL-------------GNADLDRSQNDVVDGSCFRPPNSGG 183
           G+ GS   G  +  + P+ LSL             G+    R  +DVVD  C        
Sbjct: 66  GLGGSGPTGFHNQ-MFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRC-------S 125

Query: 184 SLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERM 243
           S++    G P   M Q P   SA    +  + +VRARRGQATDPHSIAERLRRERIAER+
Sbjct: 126 SMKPVFHGQP---MQQPPP--SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERI 185

Query: 244 KALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGG 303
           +ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRLGGA AVAPLV D+      
Sbjct: 186 RALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSV 245

Query: 304 ECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLC 363
           E   G G +              Q A    S   TE+QVAKLME+++G+AMQ LQ K LC
Sbjct: 246 EDETGEGGRT------------PQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALC 296

Query: 364 LMPISLATAISTSTCHSRNP 371
           +MPISLA AI     HS+ P
Sbjct: 306 MMPISLAMAI----YHSQPP 296

[Close]

BLAST of CSPI01G17540.1 vs. Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.9e-38
Identity = 114/219 (52.05%), Postives = 140/219 (63.93%), Query Frame = 1


Query: 152 RSQNDVVDGSCFRPPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQA 211
           R Q+DV+D  C        S++    G P   M+Q          QS  + +VRARRGQA
Sbjct: 104 RFQDDVLDNRC-------SSMKPIFHGQP---MSQP--APPMPHQQSTIRPRVRARRGQA 163

Query: 212 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 271
           TDPHSIAERLRRERIAER+++LQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 164 TDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 223

Query: 272 GGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAK 331
           GGA AVAPLV ++      E       QA     +N+G               TE+QVAK
Sbjct: 224 GGAGAVAPLVTEMPLSSSVE----DETQAVWEKWSNDG---------------TERQVAK 283

Query: 332 LMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNP 371
           LME+++G+AMQ LQ K LC+MPISLA AI     HS+ P
Sbjct: 284 LMEENVGAAMQLLQSKALCIMPISLAMAI----YHSQPP 287

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BLAST of CSPI01G17540.1 vs. TrEMBL
Match: A0A0A0LWM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269350 PE=4 SV=1)

HSP 1 Score: 809.7 bits (2090), Expect = 1.7e-231
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60
           MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM
Sbjct: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60

Query: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120
           LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL
Sbjct: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120

Query: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180
           LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP
Sbjct: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180

Query: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240
           GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA
Sbjct: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240

Query: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300
           NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA
Sbjct: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300

Query: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360
           GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI
Sbjct: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360

Query: 361 STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420
           STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS
Sbjct: 361 STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420

Query: 421 KP 423
           KP
Sbjct: 421 KP 422

[Close]

BLAST of CSPI01G17540.1 vs. TrEMBL
Match: F6HYI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00040 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-121
Identity = 301/514 (58.56%), Postives = 345/514 (67.12%), Query Frame = 1


Query: 8   MQSLNSLLNHSQISLQDLHADHH-----------LNPPPPQIP-PSHFH----HFDPSAA 67
           MQ++NSLLN SQISLQDL   HH            +   PQIP PS       HFD S  
Sbjct: 1   MQAINSLLNPSQISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNPSQIQLPNTHFDSS-- 60

Query: 68  SNDDFLEQMLNTIPSCSWPDLNPSNPKSPWDL---NPINKP---SRDISDDP-------- 127
           S+DDFLEQML+T+P  SW DL P+NPKSPW+L   NPI+ P   SRD+SDD         
Sbjct: 61  SHDDFLEQMLSTLP--SWSDL-PANPKSPWELNASNPISMPSNKSRDLSDDTTPSNPDNV 120

Query: 128 --------------HQNHLTATSPAAKAAVMLQQQLLLSRGM----SGSAGNGVADHGLP 187
                          Q+ ++  S AAK+A+MLQQQLLLSRG+    S S G+G  + GL 
Sbjct: 121 QFAFDESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVAMGRSPSNGSGAGESGLL 180

Query: 188 PMPLSLGNAD---LDRSQNDVVDG-SCFRPPNSG--GSLQS------------------- 247
            +PLSL N D   +DRSQNDVVDG S F+ PN G  GS+Q+                   
Sbjct: 181 QLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGSGQASNQA 240

Query: 248 -------------NSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERL 307
                         ++GAP  VMNQTP  GSAG + +QP+Q+VRARRGQATDPHSIAERL
Sbjct: 241 QNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERL 300

Query: 308 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV 367
           RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV
Sbjct: 301 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV 360

Query: 368 ADVSSEGGGECMQGSGAQ--AGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGS 423
           AD+SSEGGG+C+Q SG     GGR +N     G QT ++NDS+TVTE QVAKLME+DMGS
Sbjct: 361 ADMSSEGGGDCIQASGTSGPTGGRATN-----GTQTTTSNDSLTVTEHQVAKLMEEDMGS 420

[Close]

BLAST of CSPI01G17540.1 vs. TrEMBL
Match: A0A061GR23_THECC (LJRHL1-like 1 OS=Theobroma cacao GN=TCM_037077 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-114
Identity = 283/483 (58.59%), Postives = 328/483 (67.91%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQ-ISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQ 60
           MQPCSREMQ++NSLLN +Q I LQDL  + + N       P     FDP++ S+DDFLEQ
Sbjct: 1   MQPCSREMQAMNSLLNPTQQIPLQDLQNNGNSNGHQQIQNPQ----FDPTS-SHDDFLEQ 60

Query: 61  MLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDP---HQNHLTAT----------- 120
           ML+T+PSCSW DL     KSPWD    ++      D+    H + + A+           
Sbjct: 61  MLSTLPSCSWSDL-----KSPWDPPKADETGGANLDNNVGFHYDEILASKLRQHQINGGG 120

Query: 121 --SPAAKAA-VMLQQQLLLS-RGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGS 180
             SPA  A  +M+QQQ++L+ R  + +A  G    G   MPLSLG++     QNDVVDGS
Sbjct: 121 GSSPATAAMKMMMQQQMMLAGRAAAAAAAGGGGGGGGLTMPLSLGSSAAGSHQNDVVDGS 180

Query: 181 CFRPPN---SGGSLQS--NSFGA-------------------PGNVMNQ-----TPGG-- 240
            F+ PN     GS+Q+  NSFGA                    G  M Q      P G  
Sbjct: 181 SFKSPNHQGGEGSVQALFNSFGAGSLHGTNQSSNQPQHFHHPQGGTMQQAQNFGAPAGTV 240

Query: 241 -------GSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 300
                  GS G + +QPKQ+VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT
Sbjct: 241 MNQSQAIGSTGGTPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 300

Query: 301 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGR 360
           DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD+ SEGGG+C+Q S A  G  
Sbjct: 301 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMPSEGGGDCIQTS-ANGGSL 360

Query: 361 NSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTS 420
             N+N   GNQT+S+NDS+TVTEQQVAKLME+DMGSAMQYLQGKGLCLMPISLATAIST+
Sbjct: 361 PRNSN---GNQTSSSNDSLTVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 420

Query: 421 TCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGN----GSVKDAASV 423
           TCHSRNP++N G    G  HP++ S GEGPSSPSMSVLTVQS +MGN    GSVKDAASV
Sbjct: 421 TCHSRNPMINNGNANNGGNHPLLQSTGEGPSSPSMSVLTVQSATMGNGVVDGSVKDAASV 469

[Close]

BLAST of CSPI01G17540.1 vs. TrEMBL
Match: W9QTC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002940 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.1e-112
Identity = 283/498 (56.83%), Postives = 325/498 (65.26%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLN--HSQISLQDLHADHHLNPPP---PQIPPSHFHHFDPSAASNDD 60
           MQPCSREMQ ++SLLN   SQISL+DL      +       QI   H  H++P   S+DD
Sbjct: 1   MQPCSREMQGMSSLLNASSSQISLEDLQQQQSQSSSSIQGSQIHQIHASHYEP-PPSHDD 60

Query: 61  FLEQMLNTIPSCSWPDLNPSNPKSPWDL--------NPINKPSRDISDD----------- 120
           FLEQML+T+   SW DL     K PWD          P NKP  D + D           
Sbjct: 61  FLEQMLSTLGPPSWADLGGQPGKVPWDTTTTVPDGNGPNNKPRDDETPDNVPAFPFDESA 120

Query: 121 ----PHQNHL------TATSPAAKAAVMLQQQLLLSRGMSGSAGNGVADHGLPPMPLSLG 180
                 +NH       + ++ AA AA+MLQ QL+L+RG  G+AG G  + GL PMPLSL 
Sbjct: 121 NLASKFRNHQISGGCGSKSAAAAAAAMMLQHQLMLARG-GGAAGAG--ETGLVPMPLSLS 180

Query: 181 NADLDRSQNDVVDGSCF--------------------------------RPPNSGGSLQS 240
           N + DRSQNDVVDGS                                     + GGS+ +
Sbjct: 181 NGEFDRSQNDVVDGSSSDVTLRFKHCTMDSALDLWPALVRRRTSFTILRHAIDFGGSMAA 240

Query: 241 -NSFGAPGNVMNQTPG-GGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKA 300
             ++GA G  MNQT    GS+G   +QP+ +VRARRGQATDPHSIAERLRRERIAERMKA
Sbjct: 241 QQNYGASGPAMNQTQAPSGSSGAQPAQPRPRVRARRGQATDPHSIAERLRRERIAERMKA 300

Query: 301 LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEG-GGE 360
           LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD+S EG GG+
Sbjct: 301 LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSPEGNGGD 360

Query: 361 CMQ-GSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLC 420
           C+Q  S     GR SN N N  NQTAS+ND+MTVTE QVAKLME+DMGSAMQYLQGKGLC
Sbjct: 361 CIQANSNGGTHGRTSNGNTN-NNQTASSNDTMTVTEHQVAKLMEEDMGSAMQYLQGKGLC 420

Query: 421 LMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGN 423
           LMPISLATAIST+TCH+RNP++N         HP +GSNGEGPSSPSMSVLTVQS + GN
Sbjct: 421 LMPISLATAISTATCHTRNPMIN-----NNHHHPPIGSNGEGPSSPSMSVLTVQSATTGN 480

[Close]

BLAST of CSPI01G17540.1 vs. TrEMBL
Match: B9IMF5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11800g PE=4 SV=2)

HSP 1 Score: 400.2 bits (1027), Expect = 3.1e-108
Identity = 277/479 (57.83%), Postives = 316/479 (65.97%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLN-HSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQ 60
           MQPCSREMQ +NSLLN  SQI LQDL    +    P QI  SHF   DP+++SNDDFLEQ
Sbjct: 1   MQPCSREMQGINSLLNPSSQIPLQDLQNQQN----PSQIQNSHF---DPNSSSNDDFLEQ 60

Query: 61  MLNTIPSCSWPDLNPSNPKSPWDL----------NPINKPSRDISDDP------------ 120
           ML+ IP CSWPDL     KSPWDL          N I KP RD+SD+             
Sbjct: 61  MLSNIPPCSWPDL-----KSPWDLTMPINNNDSSNSIAKP-RDLSDETAPSNTDNSNLGF 120

Query: 121 --------------HQNHLTATSPAAKAA-VMLQQQLLLSRGMSGSAGNGVAD----HGL 180
                          Q+ ++    AA AA +MLQQQLL++        N V D     G 
Sbjct: 121 HNNFDESVILASKLRQHQISGGGGAAAAAKMMLQQQLLMAAARGVLPQNDVIDGSSFKGG 180

Query: 181 PPMPLSLGNADLDRSQNDVVDGSC-----FRPPNSGGSLQSNSFGAPGN----VMNQTPG 240
                 L N     S N     S      F  P  GG++Q+ +FGA G     VMNQ   
Sbjct: 181 DGSMQGLFNGFGAGSMNGTGQASNQSMQHFNHPQ-GGAMQAQNFGAQGAATTAVMNQPQA 240

Query: 241 GGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASML 300
            GS G + +QP+Q+VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASML
Sbjct: 241 SGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASML 300

Query: 301 DEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNG 360
           DEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD+SSE GG+C+Q S A  G  +  +N 
Sbjct: 301 DEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAGGDCIQAS-ADGGSLSRTSN- 360

Query: 361 NGGNQTASTND-SMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSR 420
             GNQTA TND S+TVTE QVAKLME+DMGSAMQYLQGKGLCLMPISLATAIST+TCH+R
Sbjct: 361 --GNQTARTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNR 420

Query: 421 NPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGN-----GSVKDAASVSKP 423
           +P +N       + H ++ SNGEGP+SPSMSVLTVQS +MGN     G+VKDAASVSKP
Sbjct: 421 SPAIN------NNHHALLQSNGEGPASPSMSVLTVQSATMGNVGGDGGAVKDAASVSKP 455

[Close]

BLAST of CSPI01G17540.1 vs. TAIR10
Match: AT2G24260.1 (AT2G24260.1 LJRHL1-like 1)

HSP 1 Score: 236.1 bits (601), Expect = 3.9e-62
Identity = 160/278 (57.55%), Postives = 182/278 (65.47%), Query Frame = 1


Query: 165 PPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQ---KVRARRGQATDPHSIAERL 224
           P  SGG L +           Q     + G + + P Q   K+RARRGQATDPHSIAERL
Sbjct: 96  PQGSGGGLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERL 155

Query: 225 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV 284
           RRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+V+  +
Sbjct: 156 RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI 215

Query: 285 ADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAM 344
               SE GG     S A  GG  +  N         +NDS+T+TE QVAKLME+DMGSAM
Sbjct: 216 ----SEAGGSHGNASSAMVGGSQTAGN---------SNDSVTMTEHQVAKLMEEDMGSAM 275

Query: 345 QYLQGKGLCLMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVL 404
           QYLQGKGLCLMPISLATAIST+TCHSRNPL+ G     G           GPS P++S +
Sbjct: 276 QYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVG-----------GPSPPNLSGM 335

Query: 405 TVQSTS--MGNG----------------SVKDAASVSK 422
           T+QSTS  MG+G                +VK+A SVSK
Sbjct: 336 TIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSK 349

[Close]

BLAST of CSPI01G17540.1 vs. TAIR10
Match: AT5G58010.1 (AT5G58010.1 LJRHL1-like 3)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-56
Identity = 144/237 (60.76%), Postives = 166/237 (70.04%), Query Frame = 1


Query: 139 PPMPLSLGNA-DLDRSQNDVVDGSCFRPPNSGGSLQSNSFGA-PGNVMNQTPGGGSAGVS 198
           PP P SL +A  +D    D        P  SGG    +  G  P   ++ T    SA V 
Sbjct: 42  PPPPQSLFHALAVDAPFPD----QFHHPQESGGPTMGSQEGLQPQGTVSTT----SAPVV 101

Query: 199 QSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYV 258
           + +P+  VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEII+YV
Sbjct: 102 RQKPR--VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYV 161

Query: 259 KFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTA 318
           +FLQLQVKVLSMSRLGGA +V P +  +S+E GG  +    A   G N N     GN T 
Sbjct: 162 RFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGR-LNALTAPCNGLNGN-----GNATG 221

Query: 319 STNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPLMN 374
           S+N+S+  TEQ+VAKLME+DMGSAMQYLQGKGLCLMPISLATAIS+ST HSR  L N
Sbjct: 222 SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of CSPI01G17540.1 vs. TAIR10
Match: AT4G30980.1 (AT4G30980.1 LJRHL1-like 2)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-55
Identity = 148/262 (56.49%), Postives = 168/262 (64.12%), Query Frame = 1


Query: 165 PPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRE 224
           P  SGG  Q+ S        + T GG +A   Q Q K KVRARRGQATDPHSIAERLRRE
Sbjct: 98  PQGSGGQTQTQSQATA----SATTGGATA---QPQTKPKVRARRGQATDPHSIAERLRRE 157

Query: 225 RIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADV 284
           RIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA+ +  +++ 
Sbjct: 158 RIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISE- 217

Query: 285 SSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYL 344
                          AGG + N + +G            +TE QVAKLME+DMGSAMQYL
Sbjct: 218 --------------DAGGSHENTSSSG---------EAKMTEHQVAKLMEEDMGSAMQYL 277

Query: 345 QGKGLCLMPISLATAISTSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQ 404
           QGKGLCLMPISLAT IST+TC SR+P +   G                P SP++S   V 
Sbjct: 278 QGKGLCLMPISLATTISTATCPSRSPFVKDTG---------------VPLSPNLSTTIVA 310

Query: 405 STSMGNGS----VKDAASVSKP 423
           +   GNGS    VKDA SVSKP
Sbjct: 338 N---GNGSSLVTVKDAPSVSKP 310

[Close]

BLAST of CSPI01G17540.1 vs. TAIR10
Match: AT4G02590.1 (AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 127/260 (48.85%), Postives = 154/260 (59.23%), Query Frame = 1


Query: 124 GMSGSAGNGVADHGLPPMPLSL-------------GNADLDRSQNDVVDGSCFRPPNSGG 183
           G+ GS   G  +  + P+ LSL             G+    R  +DVVD  C        
Sbjct: 66  GLGGSGPTGFHNQ-MFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRC-------S 125

Query: 184 SLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERM 243
           S++    G P   M Q P   SA    +  + +VRARRGQATDPHSIAERLRRERIAER+
Sbjct: 126 SMKPVFHGQP---MQQPPP--SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERI 185

Query: 244 KALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGG 303
           +ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRLGGA AVAPLV D+      
Sbjct: 186 RALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSV 245

Query: 304 ECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLC 363
           E   G G +              Q A    S   TE+QVAKLME+++G+AMQ LQ K LC
Sbjct: 246 EDETGEGGRT------------PQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALC 296

Query: 364 LMPISLATAISTSTCHSRNP 371
           +MPISLA AI     HS+ P
Sbjct: 306 MMPISLAMAI----YHSQPP 296

[Close]

BLAST of CSPI01G17540.1 vs. TAIR10
Match: AT1G03040.1 (AT1G03040.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-39
Identity = 114/219 (52.05%), Postives = 140/219 (63.93%), Query Frame = 1


Query: 152 RSQNDVVDGSCFRPPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQA 211
           R Q+DV+D  C        S++    G P   M+Q          QS  + +VRARRGQA
Sbjct: 104 RFQDDVLDNRC-------SSMKPIFHGQP---MSQP--APPMPHQQSTIRPRVRARRGQA 163

Query: 212 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 271
           TDPHSIAERLRRERIAER+++LQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 164 TDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 223

Query: 272 GGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTNDSMTVTEQQVAK 331
           GGA AVAPLV ++      E       QA     +N+G               TE+QVAK
Sbjct: 224 GGAGAVAPLVTEMPLSSSVE----DETQAVWEKWSNDG---------------TERQVAK 283

Query: 332 LMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNP 371
           LME+++G+AMQ LQ K LC+MPISLA AI     HS+ P
Sbjct: 284 LMEENVGAAMQLLQSKALCIMPISLAMAI----YHSQPP 287

[Close]

BLAST of CSPI01G17540.1 vs. NCBI nr
Match: gi|449457905|ref|XP_004146688.1| (PREDICTED: transcription factor bHLH82 [Cucumis sativus])

HSP 1 Score: 809.7 bits (2090), Expect = 2.4e-231
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60
           MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM
Sbjct: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60

Query: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120
           LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL
Sbjct: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120

Query: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180
           LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP
Sbjct: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180

Query: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240
           GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA
Sbjct: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240

Query: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300
           NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA
Sbjct: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300

Query: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360
           GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI
Sbjct: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360

Query: 361 STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420
           STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS
Sbjct: 361 STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420

Query: 421 KP 423
           KP
Sbjct: 421 KP 422

[Close]

BLAST of CSPI01G17540.1 vs. NCBI nr
Match: gi|659086319|ref|XP_008443870.1| (PREDICTED: transcription factor bHLH82 [Cucumis melo])

HSP 1 Score: 798.9 bits (2062), Expect = 4.3e-228
Identity = 419/422 (99.29%), Postives = 419/422 (99.29%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60
           MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM
Sbjct: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQM 60

Query: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120
           LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL
Sbjct: 61  LNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQLL 120

Query: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180
           LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP
Sbjct: 121 LSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFGAP 180

Query: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240
           GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA
Sbjct: 181 GNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 240

Query: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300
           NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA
Sbjct: 241 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQA 300

Query: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360
           GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI
Sbjct: 301 GGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAI 360

Query: 361 STSTCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420
           STSTCHSRNPLMN  GGGGGSQHPVM SNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS
Sbjct: 361 STSTCHSRNPLMN--GGGGGSQHPVMASNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVS 420

Query: 421 KP 423
           KP
Sbjct: 421 KP 420

[Close]

BLAST of CSPI01G17540.1 vs. NCBI nr
Match: gi|731407723|ref|XP_010656597.1| (PREDICTED: transcription factor UNE12-like isoform X2 [Vitis vinifera])

HSP 1 Score: 462.6 bits (1189), Expect = 7.3e-127
Identity = 307/516 (59.50%), Postives = 350/516 (67.83%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHH-----------LNPPPPQIP-PSHFH---- 60
           MQPCSREMQ++NSLLN SQISLQDL   HH            +   PQIP PS       
Sbjct: 1   MQPCSREMQAINSLLNPSQISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNPSQIQLPNT 60

Query: 61  HFDPSAASNDDFLEQMLNTIPSCSWPDLNPSNPKSPWDLN---PINKPS---RDISDDP- 120
           HFD S  S+DDFLEQML+T+PS  W DL P+NPKSPW+LN   PI+ PS   RD+SDD  
Sbjct: 61  HFDSS--SHDDFLEQMLSTLPS--WSDL-PANPKSPWELNASNPISMPSNKSRDLSDDTT 120

Query: 121 ---------------------HQNHLTATSPAAKAAVMLQQQLLLSRGM----SGSAGNG 180
                                 Q+ ++  S AAK+A+MLQQQLLLSRG+    S S G+G
Sbjct: 121 PSNPDNVQFAFDESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVAMGRSPSNGSG 180

Query: 181 VADHGLPPMPLSLGNAD---LDRSQNDVVDGSC-FRPPNSGGS----------------- 240
             + GL  +PLSL N D   +DRSQNDVVDGS  F+ PN GG                  
Sbjct: 181 AGESGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGS 240

Query: 241 ------------LQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAE 300
                        Q+ ++GAP  VMNQTP  GSAG + +QP+Q+VRARRGQATDPHSIAE
Sbjct: 241 GQASNQAQNFHHPQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAE 300

Query: 301 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 360
           RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP
Sbjct: 301 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP 360

Query: 361 LVADVSSEGGGECMQGSGAQ--AGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDM 420
           LVAD+SSEGGG+C+Q SG     GGR +N     G QT ++NDS+TVTE QVAKLME+DM
Sbjct: 361 LVADMSSEGGGDCIQASGTSGPTGGRATN-----GTQTTTSNDSLTVTEHQVAKLMEEDM 420

Query: 421 GSAMQYLQGKGLCLMPISLATAISTSTCHSRNPLMNGGG------GGGGSQHPVM-GSNG 423
           GSAMQYLQGKGLCLMPISLATAIST+TCHSRNP++            G   HP++  SN 
Sbjct: 421 GSAMQYLQGKGLCLMPISLATAISTTTCHSRNPMVAAAAVAASNINNGSHTHPLLPNSNA 480

[Close]

BLAST of CSPI01G17540.1 vs. NCBI nr
Match: gi|731407721|ref|XP_010656596.1| (PREDICTED: uncharacterized protein LOC100243222 isoform X1 [Vitis vinifera])

HSP 1 Score: 459.5 bits (1181), Expect = 6.2e-126
Identity = 308/521 (59.12%), Postives = 352/521 (67.56%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQISLQDLHADHH-----------LNPPPPQIP-PSHFH---- 60
           MQPCSREMQ++NSLLN SQISLQDL   HH            +   PQIP PS       
Sbjct: 1   MQPCSREMQAINSLLNPSQISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNPSQIQLPNT 60

Query: 61  HFDPSAASNDDFLEQMLNTIPSCSWPDLNPSNPKSPWDL---NPINKP---SRDISDDP- 120
           HFD S  S+DDFLEQML+T+P  SW DL P+NPKSPW+L   NPI+ P   SRD+SDD  
Sbjct: 61  HFDSS--SHDDFLEQMLSTLP--SWSDL-PANPKSPWELNASNPISMPSNKSRDLSDDTT 120

Query: 121 ---------------------HQNHLTATSPAAKAAVMLQQQLLLSRGM----SGSAGNG 180
                                 Q+ ++  S AAK+A+MLQQQLLLSRG+    S S G+G
Sbjct: 121 PSNPDNVQFAFDESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVAMGRSPSNGSG 180

Query: 181 VADHGLPPMPLSLGNAD---LDRSQNDVVDG-SCFRPPNSG--GSLQS------------ 240
             + GL  +PLSL N D   +DRSQNDVVDG S F+ PN G  GS+Q+            
Sbjct: 181 AGESGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGS 240

Query: 241 --------------------NSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDP 300
                                ++GAP  VMNQTP  GSAG + +QP+Q+VRARRGQATDP
Sbjct: 241 GQASNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDP 300

Query: 301 HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 360
           HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA
Sbjct: 301 HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 360

Query: 361 AAVAPLVADVSSEGGGECMQGSGAQ--AGGRNSNNNGNGGNQTASTNDSMTVTEQQVAKL 420
           AAVAPLVAD+SSEGGG+C+Q SG     GGR +N     G QT ++NDS+TVTE QVAKL
Sbjct: 361 AAVAPLVADMSSEGGGDCIQASGTSGPTGGRATN-----GTQTTTSNDSLTVTEHQVAKL 420

Query: 421 MEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPLMNGGG------GGGGSQHPVM 423
           ME+DMGSAMQYLQGKGLCLMPISLATAIST+TCHSRNP++            G   HP++
Sbjct: 421 MEEDMGSAMQYLQGKGLCLMPISLATAISTTTCHSRNPMVAAAAVAASNINNGSHTHPLL 480

[Close]

BLAST of CSPI01G17540.1 vs. NCBI nr
Match: gi|590572852|ref|XP_007011960.1| (LJRHL1-like 1 [Theobroma cacao])

HSP 1 Score: 419.9 bits (1078), Expect = 5.4e-114
Identity = 283/483 (58.59%), Postives = 328/483 (67.91%), Query Frame = 1


Query: 1   MQPCSREMQSLNSLLNHSQ-ISLQDLHADHHLNPPPPQIPPSHFHHFDPSAASNDDFLEQ 60
           MQPCSREMQ++NSLLN +Q I LQDL  + + N       P     FDP++ S+DDFLEQ
Sbjct: 1   MQPCSREMQAMNSLLNPTQQIPLQDLQNNGNSNGHQQIQNPQ----FDPTS-SHDDFLEQ 60

Query: 61  MLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDP---HQNHLTAT----------- 120
           ML+T+PSCSW DL     KSPWD    ++      D+    H + + A+           
Sbjct: 61  MLSTLPSCSWSDL-----KSPWDPPKADETGGANLDNNVGFHYDEILASKLRQHQINGGG 120

Query: 121 --SPAAKAA-VMLQQQLLLS-RGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGS 180
             SPA  A  +M+QQQ++L+ R  + +A  G    G   MPLSLG++     QNDVVDGS
Sbjct: 121 GSSPATAAMKMMMQQQMMLAGRAAAAAAAGGGGGGGGLTMPLSLGSSAAGSHQNDVVDGS 180

Query: 181 CFRPPN---SGGSLQS--NSFGA-------------------PGNVMNQ-----TPGG-- 240
            F+ PN     GS+Q+  NSFGA                    G  M Q      P G  
Sbjct: 181 SFKSPNHQGGEGSVQALFNSFGAGSLHGTNQSSNQPQHFHHPQGGTMQQAQNFGAPAGTV 240

Query: 241 -------GSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 300
                  GS G + +QPKQ+VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT
Sbjct: 241 MNQSQAIGSTGGTPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 300

Query: 301 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGR 360
           DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD+ SEGGG+C+Q S A  G  
Sbjct: 301 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMPSEGGGDCIQTS-ANGGSL 360

Query: 361 NSNNNGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTS 420
             N+N   GNQT+S+NDS+TVTEQQVAKLME+DMGSAMQYLQGKGLCLMPISLATAIST+
Sbjct: 361 PRNSN---GNQTSSSNDSLTVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 420

Query: 421 TCHSRNPLMNGGGGGGGSQHPVMGSNGEGPSSPSMSVLTVQSTSMGN----GSVKDAASV 423
           TCHSRNP++N G    G  HP++ S GEGPSSPSMSVLTVQS +MGN    GSVKDAASV
Sbjct: 421 TCHSRNPMINNGNANNGGNHPLLQSTGEGPSSPSMSVLTVQSATMGNGVVDGSVKDAASV 469

The following BLAST results are available for this feature:

BLAST of CSPI01G17540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH066_ARATH	7.0e-61	57.55	Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1	[more]
BH082_ARATH	2.0e-55	60.76	Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1	[more]
BH069_ARATH	2.8e-54	56.49	Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2	[more]
UNE12_ARATH	2.1e-41	48.85	Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2	[more]
BH007_ARATH	4.9e-38	52.05	Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1	[more]

BLAST of CSPI01G17540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWM2_CUCSA	1.7e-231	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269350 PE=4 SV=1	[more]
F6HYI3_VITVI	1.4e-121	58.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00040 PE=4 SV=...	[more]
A0A061GR23_THECC	3.8e-114	58.59	LJRHL1-like 1 OS=Theobroma cacao GN=TCM_037077 PE=4 SV=1	[more]
W9QTC8_9ROSA	2.1e-112	56.83	Uncharacterized protein OS=Morus notabilis GN=L484_002940 PE=4 SV=1	[more]
B9IMF5_POPTR	3.1e-108	57.83	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s11800g PE=4 SV=2	[more]

BLAST of CSPI01G17540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24260.1	3.9e-62	57.55	LJRHL1-like 1	[more]
AT5G58010.1	1.1e-56	60.76	LJRHL1-like 3	[more]
AT4G30980.1	1.6e-55	56.49	LJRHL1-like 2	[more]
AT4G02590.1	1.2e-42	48.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.1	2.7e-39	52.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CSPI01G17540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457905\|ref\|XP_004146688.1\|	2.4e-231	100.00	PREDICTED: transcription factor bHLH82 [Cucumis sativus]	[more]
gi\|659086319\|ref\|XP_008443870.1\|	4.3e-228	99.29	PREDICTED: transcription factor bHLH82 [Cucumis melo]	[more]
gi\|731407723\|ref\|XP_010656597.1\|	7.3e-127	59.50	PREDICTED: transcription factor UNE12-like isoform X2 [Vitis vinifera]	[more]
gi\|731407721\|ref\|XP_010656596.1\|	6.2e-126	59.12	PREDICTED: uncharacterized protein LOC100243222 isoform X1 [Vitis vinifera]	[more]
gi\|590572852\|ref\|XP_007011960.1\|	5.4e-114	58.59	LJRHL1-like 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G17540	CSPI01G17540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G17540.1	CSPI01G17540.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G17540.1.utr5p1	CSPI01G17540.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G17540.1.cds1	CSPI01G17540.1.cds1	CDS
CSPI01G17540.1.cds2	CSPI01G17540.1.cds2	CDS
CSPI01G17540.1.cds3	CSPI01G17540.1.cds3	CDS
CSPI01G17540.1.cds4	CSPI01G17540.1.cds4	CDS
CSPI01G17540.1.cds5	CSPI01G17540.1.cds5	CDS
CSPI01G17540.1.cds6	CSPI01G17540.1.cds6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G17540.1.utr3p1	CSPI01G17540.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 212..269 score: 1.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 215..260 score: 2.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 216..265 score: 1.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 210..259 score: 1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 208..270 score: 4.97
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 189..280 score: 4.9E-101coord: 314..398 score: 4.9E
None	No IPR available	PANTHER	PTHR16223:SF45	SUBFAMILY NOT NAMED	coord: 189..280 score: 4.9E-101coord: 314..398 score: 4.9E