CSPI01G13140.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTCCTAACTTCTTAATCCCAATTTCCCCCTCCCCCTTTTTTCTCTCTAACTCCATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATGTGAGTTTCTCCTCTGTTTTCAATTTCGGTTTTTCATTTCCATTTCCATTTTCGTTTTCGTTTTCATTTTTGTGCTTTTGGTTTTAACAGAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTTTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCCGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCGCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGACTTTCAACCAAAACAACTTAGATTAATCTTACATAATTATATATTAAATTAGAATCAGTCCCAAAAAAAGAAGAAAACACAAAATGGGTCATTTTTTGTGACTTTATTTTGTATAGTTGTTTGTTCTATATATATTACCCCCCCAAAACAAAACCCCTAGTTTAGTTAGCTTGGAGTAACTCAAAAAATGGGTTCTCTCTTTCTTTCTTTTTCTTGGCCTCTCCATAGAAATTGTGTGATATGTGACGACATTGATATAGGATGTAGCGTAGCTGATCTGAGAATAGTTGAATTGATTTAAGTATTAGTAAATGTGGAATGTACGGATTTGTAATAGTAGTTTTTTTTTATAAAAAAAAAATAGTGAAGTTAGAGTGATAGTTTGATTAGGGTTTGGGGGTATTAAGAGAGATTGAGGAGTTTTAAGATGTGTGGGGGAGAGTAGTTGGGGAGGAAAAGCATATGGTCCTACATATCAAGAAGGATCTTTGTTGTTTGTGTGATTTTGTATGGATTTGTATACCAAAAAGATTTAGACCAAGTTTAATTTTATTGTA ATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTTTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCCGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCGCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGA ATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTTTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCCGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCGCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGA
BLAST of CSPI01G13140.1 vs. TrEMBL
Match: A0A0A0LS86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097650 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 1.9e-128 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TrEMBL
Match: I1M4G8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G322300 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.5e-67 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TrEMBL
Match: A0A0B2QJ34_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021066 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.5e-67 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TrEMBL
Match: A0A067L6B7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05439 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.3e-65 Identity = 148/260 (56.92%), Postives = 177/260 (68.08%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TrEMBL
Match: A0A0B0MI14_GOSAR (Transcription factor MafA OS=Gossypium arboreum GN=F383_09559 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.5e-64 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TAIR10
Match: AT5G22930.1 (AT5G22930.1 Protein of unknown function (DUF1635)) HSP 1 Score: 185.3 bits (469), Expect = 4.4e-47 Identity = 109/233 (46.78%), Postives = 146/233 (62.66%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TAIR10
Match: AT3G44940.1 (AT3G44940.1 Protein of unknown function (DUF1635)) HSP 1 Score: 181.8 bits (460), Expect = 4.8e-46 Identity = 116/262 (44.27%), Postives = 155/262 (59.16%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TAIR10
Match: AT2G28140.1 (AT2G28140.1 Protein of unknown function (DUF1635)) HSP 1 Score: 159.1 bits (401), Expect = 3.4e-39 Identity = 108/226 (47.79%), Postives = 139/226 (61.50%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TAIR10
Match: AT2G28690.1 (AT2G28690.1 Protein of unknown function (DUF1635)) HSP 1 Score: 92.0 bits (227), Expect = 5.1e-19 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. TAIR10
Match: AT5G59760.1 (AT5G59760.1 Protein of unknown function (DUF1635)) HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15 Identity = 60/183 (32.79%), Postives = 93/183 (50.82%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. NCBI nr
Match: gi|449459090|ref|XP_004147279.1| (PREDICTED: formin-3 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 2.8e-128 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. NCBI nr
Match: gi|659072065|ref|XP_008463249.1| (PREDICTED: formin-3 [Cucumis melo]) HSP 1 Score: 450.3 bits (1157), Expect = 2.1e-123 Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. NCBI nr
Match: gi|955360090|ref|XP_014621534.1| (PREDICTED: arp2/3 complex-activating protein rickA [Glycine max]) HSP 1 Score: 264.2 bits (674), Expect = 2.1e-67 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. NCBI nr
Match: gi|802551260|ref|XP_012064704.1| (PREDICTED: dual specificity protein kinase splA [Jatropha curcas]) HSP 1 Score: 256.9 bits (655), Expect = 3.4e-65 Identity = 148/260 (56.92%), Postives = 177/260 (68.08%), Query Frame = 1
BLAST of CSPI01G13140.1 vs. NCBI nr
Match: gi|728815208|gb|KHG01768.1| (Transcription factor MafA [Gossypium arboreum]) HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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