CSPI01G10800.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G10800.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Heat-shock protein, putative
Location	Chr1 : 6758145 .. 6758969 (+)
Sequence length	384

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGCCTCTTCAAAATCCTATATCCATTCTCACCACTAACCACCCCCGCCAAAACATCCAAAAATCTTCCTTCCCATCAACAATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACATCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTACTTCCATTTTCCCCCATTCATTTCTACCCCACTTGGTTTTTATTTATTTATTTATTTTTACGTTCTCGTTCGTTAATTTTACGTCTAGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGATCGATCAATTTGAAAGCGAGTTTGCTGCCCTCTCTGCTTTCTATTTTCCAATTTTTTTTCTCTTTTGGTTGGTTGGAAAATTGGAGAAATTTGAAGCTCTGTATTGTTAGTTTGTGATGAATAGGAAGAATTTATGTATCAACAAATTAAATTGTTGGGTTTACAAGTAGAAGTAAGTGTAGGATTGGATTGATCTGAATCAATGAAAACTGTCTCAACTTAAATTTGGACTGCTTGATGTTTATTCAAATATTTTTATGAGTTCCA

mRNA sequence

ATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACATCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGA

Coding sequence (CDS)

ATGGAGATTTCTACCTCTACTCCTCATCCCCTTCTCTTTCCTTACTACCATTACTCCATTCCCCATAATTACGTTCACTGGGTTCAAACATCAGACTCTCATCTTTTCTCCGCCGATCTCCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTTGAAGATTCGCGGTATCTGATCATTCGGACAGAGGCTGTGAATGGAGTTACTTCTCCGGCCAAGAGTTTCTCCAGGAAATTTCGACTTCCGGTTTTGGTTGATGTAGATGGAATTTCGGCTGGGTTTGAGAATGGGGTTTTGGAGATCACGGTACCAAGGTCGTCTTTTAGGAGAAGATCTGTTGTTCATTCTCCTGACCAACATCAACTTCTTGCCAGGGCTGCTTGA

Homology

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BLAST of CSPI01G10800.1 vs. Swiss-Prot
Match: HS154_ARATH (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.9e-27
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 1


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VNGVTSPAKSFSRKFR 82
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  ++    P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 83  LPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS--PDQHQLLARAA 128
           LP  +D+ GISAG+E+GVL + VP+    RR +  S  P+  QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of CSPI01G10800.1 vs. Swiss-Prot
Match: HS188_ORYSJ (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-23
Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = 1


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNGVTSPA------KSFS 82
           ++V W +T+ +HL+SA LPGVRKEEI+VEVED+ YL+IRTE  +G           +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFA 114

Query: 83  RKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVH 116
           RKFRLP +VD DGISA + +GVL +TVPR   R R VV+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPRLHTRARPVVN 153

[Close]

BLAST of CSPI01G10800.1 vs. Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-16
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + AG ENGVL +TVP++  ++  V
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEV 143

[Close]

BLAST of CSPI01G10800.1 vs. Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-16
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           + W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + AG ENGVL +TVP++  ++  V
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEV 143

[Close]

BLAST of CSPI01G10800.1 vs. Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           V W +T +SH+F ADLPGV+KEE+KVEVE+   L+I          + +  + V   +  
Sbjct: 44  VDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 103

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F R+FRLP    VD + A  ENGVL +TVP++  ++  V
Sbjct: 104 FMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEV 142

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BLAST of CSPI01G10800.1 vs. TrEMBL
Match: A0A0A0LUT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063560 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 4.4e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH
Sbjct: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

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BLAST of CSPI01G10800.1 vs. TrEMBL
Match: H6TB34_CITLA (HSP15 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.3e-53
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 1


Query: 1   MEISTSTPHPL--------LFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P  L        LFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 120

Query: 121 VVHSPDQHQLLARAA 128
           V+HSPD  QLLARAA
Sbjct: 121 VIHSPD--QLLARAA 132

[Close]

BLAST of CSPI01G10800.1 vs. TrEMBL
Match: D7TRZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0992g00020 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.6e-34
Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 1


Query: 10  PLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNGVT 69
           PLL  Y H++ P NYVHW +T +SH++SA+LPGVRKEEI+VE+EDSRYLIIRTEA++  T
Sbjct: 18  PLLVSY-HFT-PDNYVHWTETPESHIYSANLPGVRKEEIRVELEDSRYLIIRTEAIDEST 77

Query: 70  SPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS---PDQHQLLARA 128
            PAKSF RKFRLP ++D+DGISAG+E+GVL +TVPRS  RR   +     P+Q +LLARA
Sbjct: 78  KPAKSFMRKFRLPDMIDIDGISAGYEDGVLTVTVPRSFVRRGFYIDPGDLPEQLELLARA 136

[Close]

BLAST of CSPI01G10800.1 vs. TrEMBL
Match: A0A0B2RL23_GLYSO (15.4 kDa class V heat shock protein OS=Glycine soja GN=glysoja_010030 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.6e-34
Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 1


Query: 8   PHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNG 67
           P  LLFPY   SIP NYVHW +T DSH+FSAD+PGVRKEE++VEVEDSRYLIIRT+AV+ 
Sbjct: 14  PSHLLFPYN--SIPENYVHWTETPDSHIFSADIPGVRKEELRVEVEDSRYLIIRTQAVDE 73

Query: 68  VTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV--VHSPDQHQLLAR 127
            T PA+ F RKFRLP  VD+DGISAG+E+GVL ITVPRS  R   +     P+  ++LAR
Sbjct: 74  STEPARKFERKFRLPGRVDLDGISAGYEDGVLTITVPRSLRRGFYIDPADVPENLEVLAR 133

[Close]

BLAST of CSPI01G10800.1 vs. TrEMBL
Match: I1MFG5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G106700 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 7.6e-34
Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 1


Query: 8   PHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNG 67
           P  LLFPY   SIP NYVHW +T DSH+FSAD+PGVRKEE++VEVEDSRYLIIRT+AV+ 
Sbjct: 14  PSHLLFPYN--SIPENYVHWTETPDSHIFSADIPGVRKEELRVEVEDSRYLIIRTQAVDE 73

Query: 68  VTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV--VHSPDQHQLLAR 127
            T PA+ F RKFRLP  VD+DGISAG+E+GVL ITVPRS  R   +     P+  ++LAR
Sbjct: 74  STEPARKFERKFRLPGRVDLDGISAGYEDGVLTITVPRSLRRGFYIDPADVPENLEVLAR 133

[Close]

BLAST of CSPI01G10800.1 vs. TAIR10
Match: AT4G21870.1 (AT4G21870.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 5.6e-28
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 1


Query: 23  NYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VNGVTSPAKSFSRKFR 82
           N+V W Q+ DSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  ++    P K+F RKFR
Sbjct: 26  NHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFR 85

Query: 83  LPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS--PDQHQLLARAA 128
           LP  +D+ GISAG+E+GVL + VP+    RR +  S  P+  QLLARAA
Sbjct: 86  LPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of CSPI01G10800.1 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-16
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1


Query: 19  SIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGV 78
           +I +  V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +  + V
Sbjct: 42  AIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 101

Query: 79  TSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPR-SSFRRRSVVHSPD 119
              +  FSRKFRLP  V +D + A  ENGVL +TVP+  + ++++ V S D
Sbjct: 102 ERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSID 152

[Close]

BLAST of CSPI01G10800.1 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 1


Query: 19  SIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGV 78
           +I +  V W +T+++H+F ADLPG++KEE+KVE+ED   L I          + +  + V
Sbjct: 44  AITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 103

Query: 79  TSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPR-SSFRRRSVVHSPD 119
              +  FSRKF+LP  V +D + A  ENGVL +TVP+    ++++ V S D
Sbjct: 104 ERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSID 154

[Close]

BLAST of CSPI01G10800.1 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 1


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVNGVTSPAKS 84
           V W +T ++H+F ADLPG++KEE+KVE+E+   L I          + +  + V   +  
Sbjct: 48  VDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQ 107

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV 114
           F+R+FRLP  V +D + A  ENGVL +TVP++  ++  V
Sbjct: 108 FTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADV 146

[Close]

BLAST of CSPI01G10800.1 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 1


Query: 25  VHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVN----------GVTSPAKS 84
           V W +T ++H+F ADLPG+RKEE+KVEVED   L I  E  N           V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 85  FSRKFRLPVLVDVDGISAGFENGVLEITVPR 106
           F+R+FRLP    ++ I A  ENGVL +TVP+
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPK 142

[Close]

BLAST of CSPI01G10800.1 vs. NCBI nr
Match: gi|449454728|ref|XP_004145106.1| (PREDICTED: 15.4 kDa class V heat shock protein [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 6.3e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH
Sbjct: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

[Close]

BLAST of CSPI01G10800.1 vs. NCBI nr
Match: gi|659067764|ref|XP_008441176.1| (PREDICTED: 15.4 kDa class V heat shock protein [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 1


Query: 1   MEISTSTPHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60
           MEIS S P PLLFPYY Y+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII
Sbjct: 1   MEISISDPRPLLFPYYRYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLII 60

Query: 61  RTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHSPDQH 120
           RTEAV+GVTSPAKSFSRKFRLPV+VDVDGISAGFENGVLEITVPRSSFRRR+V HSPDQ 
Sbjct: 61  RTEAVDGVTSPAKSFSRKFRLPVMVDVDGISAGFENGVLEITVPRSSFRRRAVAHSPDQL 120

Query: 121 QLLARAA 128
           QLLARAA
Sbjct: 121 QLLARAA 127

[Close]

BLAST of CSPI01G10800.1 vs. NCBI nr
Match: gi|315932702|gb|ADU55781.1| (HSP15 [Citrullus lanatus])

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52
Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 1


Query: 1   MEISTSTPHPL--------LFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60
           MEISTS P  L        LFPY+HY+IPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120
           EDSRYLIIRTEAV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR SFRR S
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SFRRSS 120

Query: 121 VVHSPDQHQLLARAA 128
           V+HSPD  QLLARAA
Sbjct: 121 VIHSPD--QLLARAA 132

[Close]

BLAST of CSPI01G10800.1 vs. NCBI nr
Match: gi|225444442|ref|XP_002271195.1| (PREDICTED: 15.4 kDa class V heat shock protein [Vitis vinifera])

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 1


Query: 10  PLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNGVT 69
           PLL  Y H++ P NYVHW +T +SH++SA+LPGVRKEEI+VE+EDSRYLIIRTEA++  T
Sbjct: 18  PLLVSY-HFT-PDNYVHWTETPESHIYSANLPGVRKEEIRVELEDSRYLIIRTEAIDEST 77

Query: 70  SPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSVVHS---PDQHQLLARA 128
            PAKSF RKFRLP ++D+DGISAG+E+GVL +TVPRS  RR   +     P+Q +LLARA
Sbjct: 78  KPAKSFMRKFRLPDMIDIDGISAGYEDGVLTVTVPRSFVRRGFYIDPGDLPEQLELLARA 136

[Close]

BLAST of CSPI01G10800.1 vs. NCBI nr
Match: gi|356555652|ref|XP_003546144.1| (PREDICTED: 15.4 kDa class V heat shock protein-like [Glycine max])

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 79/122 (64.75%), Postives = 94/122 (77.05%), Query Frame = 1


Query: 8   PHPLLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEVEDSRYLIIRTEAVNG 67
           P  LLFPY   SIP NYVHW +T DSH+FSAD+PGVRKEE++VEVEDSRYLIIRT+AV+ 
Sbjct: 14  PSHLLFPYN--SIPENYVHWTETPDSHIFSADIPGVRKEELRVEVEDSRYLIIRTQAVDE 73

Query: 68  VTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRSV--VHSPDQHQLLAR 127
            T PA+ F RKFRLP  VD+DGISAG+E+GVL ITVPRS  R   +     P+  ++LAR
Sbjct: 74  STEPARKFERKFRLPGRVDLDGISAGYEDGVLTITVPRSLRRGFYIDPADVPENLEVLAR 133

The following BLAST results are available for this feature:

BLAST of CSPI01G10800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS154_ARATH	9.9e-27	58.72	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana GN=HSP15.4 PE=2 SV=1	[more]
HS188_ORYSJ	8.7e-23	54.55	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.8 P...	[more]
HS16B_ORYSJ	7.9e-16	41.41	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9...	[more]
HS16A_ORYSJ	7.9e-16	41.41	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9...	[more]
HS16C_ORYSJ	3.0e-15	41.41	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9...	[more]

BLAST of CSPI01G10800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUT8_CUCSA	4.4e-66	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063560 PE=3 SV=1	[more]
H6TB34_CITLA	7.3e-53	84.44	HSP15 OS=Citrullus lanatus PE=2 SV=1	[more]
D7TRZ0_VITVI	7.6e-34	63.64	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0992g00020 PE=3 SV=...	[more]
A0A0B2RL23_GLYSO	7.6e-34	64.75	15.4 kDa class V heat shock protein OS=Glycine soja GN=glysoja_010030 PE=3 SV=1	[more]
I1MFG5_SOYBN	7.6e-34	64.75	Uncharacterized protein OS=Glycine max GN=GLYMA_15G106700 PE=3 SV=1	[more]

BLAST of CSPI01G10800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21870.1	5.6e-28	58.72	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	4.9e-16	39.64	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.1e-15	38.74	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.2e-15	38.38	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	4.1e-15	45.05	HSP20-like chaperones superfamily protein	[more]

BLAST of CSPI01G10800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454728\|ref\|XP_004145106.1\|	6.3e-66	100.00	PREDICTED: 15.4 kDa class V heat shock protein [Cucumis sativus]	[more]
gi\|659067764\|ref\|XP_008441176.1\|	2.0e-59	92.13	PREDICTED: 15.4 kDa class V heat shock protein [Cucumis melo]	[more]
gi\|315932702\|gb\|ADU55781.1\|	1.1e-52	84.44	HSP15 [Citrullus lanatus]	[more]
gi\|225444442\|ref\|XP_002271195.1\|	1.1e-33	63.64	PREDICTED: 15.4 kDa class V heat shock protein [Vitis vinifera]	[more]
gi\|356555652\|ref\|XP_003546144.1\|	1.1e-33	64.75	PREDICTED: 15.4 kDa class V heat shock protein-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G10800	CSPI01G10800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G10800.1	CSPI01G10800.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G10800.1.utr5p1	CSPI01G10800.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G10800.1.cds1	CSPI01G10800.1.cds1	CDS
CSPI01G10800.1.cds2	CSPI01G10800.1.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G10800.1.utr3p1	CSPI01G10800.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..107 score: 3.7
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 26..105 score: 15
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 25..108 score: 2.1
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 12..108 score: 6.98
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 18..127 score: 5.0