CSPI01G10360.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G10360.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ankyrin repeat family protein
Location	Chr1 : 6533319 .. 6534648 (-)
Sequence length	768

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTAGAATATGAGGATTTCATTTCTAGCAACTCTATGTTCATATATATCCCTTCATAGTTCTGTTGTTAATTTCATGCACTTTTCCTTAAGTTTACATCCCCTCTCCCTAACATTATCACATTGCAAACTCTCCAATCATTAGCAAAAGAAAATTTCTAATAAAATATAAATTTGTGGAATAGATTTAAATATGGCAACTAGATTCAAAGTATTAGTATATATAACAACATTTTTTAAAAAATTTTAAAATTTTAAATATATAGTAAAATCTATTAAAATCTATCAATGATAGACCATGTTGTAAATATTGGTTATTAATGTTTTATTCATGTAGCTACTACAACTTTGATATTATAAGTTGAGACTTAAATTATTGTTGTCTTAAGTTAATGTTTAAACTTTAAATTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTACGGATTGTTTGTTTGTAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTATTATGGTTTTACTTCCAAATCCCTTATTTGATATATAACAATAATCTTTAATTAATACTATATATTCAATGTGTTCTTACTCTTCATTTCTTTTGTTGTAGATATAGCATTAGATATTCTGAAAAAGAAACCTGATTTAGCAAAGGAGAGGGTGGGAGGAACTGGTGAAACAGCTTTGCATTTACTATCTAGAAAGCCAAATGCAATTGGTAGCAGCAACAAGCTTTGCTTCTGGAAAAAATATATAAACTCTCGTAAT

mRNA sequence

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTATTATGATATAGCATTAGATATTCTGAAAAAGAAACCTGATTTAGCAAAGGAGAGGGTGGGAGGAACTGGTGAAACAGCTTTGCATTTACTATCTAGAAAGCCAAATGCAATTGGTAGCAGCAACAAGCTTTGCTTCTGGAAAAAATATATAAACTCTCGTAAT

Coding sequence (CDS)

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTATTATGATATAGCATTAGATATTCTGAAAAAGAAACCTGATTTAGCAAAGGAGAGGGTGGGAGGAACTGGTGAAACAGCTTTGCATTTACTATCTAGAAAGCCAAATGCAATTGGTAGCAGCAACAAGCTTTGCTTCTGGAAAAAATATATAAACTCTCGTAAT

Homology

[Close]

BLAST of CSPI01G10360.1 vs. TrEMBL
Match: A0A0A0LU57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.3e-106
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYY 204
           NFNDLQTNQQLDLLLATVDSDYY
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYY 203

[Close]

BLAST of CSPI01G10360.1 vs. TrEMBL
Match: A0A0A0LRZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-56
Identity = 125/199 (62.81%), Postives = 148/199 (74.37%), Query Frame = 1


Query: 45  ENIKNAVKLHEAALKGDWEAANNIFKKDS-SWITKKITIRENTALHIAAAGKHISFVEKL 104
           E I  AV L++AA KGDW+AA +IF     SWI+K+IT + NTALHIAAA KHISFVEKL
Sbjct: 17  EEIIKAVNLYQAAFKGDWKAAQSIFDDHPPSWISKEITSKGNTALHIAAAAKHISFVEKL 76

Query: 105 VKLYSSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLS 164
           +KLYS +  DLA  N  G TAL+YAAVSG+V IAE +V  ++ L D  D  H   +P+L 
Sbjct: 77  IKLYSHHQLDLARPNGAGCTALSYAAVSGVVSIAEAMVLQNNILPDIPD--HKGRIPVLK 136

Query: 165 SVFYKLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERV-- 224
           +V YK KDMA YL+ QTNF  L+ NQQ DLLLAT+DSDYYDIALDIL +KP+LAKERV  
Sbjct: 137 AVIYKRKDMAFYLYHQTNFEGLENNQQFDLLLATIDSDYYDIALDILNRKPELAKERVEE 196

Query: 225 GGTGETALHLLSRKPNAIG 241
            G  ETA HLL+RKPNAIG
Sbjct: 197 NGESETAWHLLARKPNAIG 213

[Close]

BLAST of CSPI01G10360.1 vs. TrEMBL
Match: A0A0A0LRU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSN 110
           V L+++A+KGDW+ A +IF  DSS IT KIT  E+T LHIAAA KHISFVE LVK YSS 
Sbjct: 152 VVLYQSAIKGDWKTAKSIFDVDSSAITMKITDGEDTPLHIAAAAKHISFVENLVKEYSSP 211

Query: 111 GFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLK 170
             DLAIKN +G TALA+AA SG+VRIA+ +VDN+ +L +  +    K  P+L +V YK K
Sbjct: 212 S-DLAIKNGNGDTALAFAAASGVVRIAKVMVDNNAELPNLYNAN--KPFPVLMAVAYKRK 271

Query: 171 DMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVG-------- 230
           +MAS+L S+T+F  L   +Q++LL+A + SDYYDIALDIL KKP+LAK R+G        
Sbjct: 272 EMASFLLSKTDFQKLNNFEQIELLIAAISSDYYDIALDILTKKPELAKARMGLKETGGNW 331

Query: 231 ---GTGETALHLLSRKPNAIGSSNKLCFWKKYINSRN 257
                GETALH+LSRK + IGSS+ L FW++++NSR+
Sbjct: 332 SENPEGETALHILSRKSDVIGSSSNLSFWRRHMNSRS 365

[Close]

BLAST of CSPI01G10360.1 vs. TrEMBL
Match: A0A0A0LWY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.6e-44
Identity = 102/183 (55.74%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 40  SMESKENIKNAVKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISF 99
           S + K  +   V L++AA+KGDW+ A +IF  DSS IT KIT   +T LHIAAA KHISF
Sbjct: 142 STKKKGMLPVQVVLYQAAIKGDWKTAKSIFDVDSSAITMKITGGVDTPLHIAAAAKHISF 201

Query: 100 VEKLVKLYSSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYV 159
           VEKLV+ YS +  DLAIKN++G TALA+AA SG+VRIAE +VD + KL + + +A+ K+ 
Sbjct: 202 VEKLVEKYSLS--DLAIKNKNGDTALAFAAASGVVRIAEVMVDKNEKLPN-ICNANTKF- 261

Query: 160 PLLSSVFYKLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKE 219
           P+L +V YK K+MAS+L S+TNF  ++  +Q++LL++ + SDYYDIALDIL KKP+LAK 
Sbjct: 262 PVLMAVAYKRKEMASFLLSKTNFQKIEAFEQIELLISAISSDYYDIALDILTKKPELAKA 320

Query: 220 RVG 223
           R+G
Sbjct: 322 RIG 320

[Close]

BLAST of CSPI01G10360.1 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-41
Identity = 98/206 (47.57%), Postives = 133/206 (64.56%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIREN-TALHIAAAGKHISFVEKLVKLYSS 110
           + L+ AALKGDWE A +I K D+SW       R+N TALHIAA  KH+ FVEKL+   + 
Sbjct: 114 ISLYHAALKGDWEKAESILKADTSWSVSNYITRDNETALHIAAGAKHVEFVEKLIDTMTL 173

Query: 111 NGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKL 170
           +  D+ I N  G TAL +AA SG+VRIAE +V  +  L  P+        PL  ++ Y+ 
Sbjct: 174 D--DMVIINTHGNTALCFAATSGVVRIAELMVKKNKDL--PLIRGFGNATPLFMAISYQR 233

Query: 171 KDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKER-VGGTGETA 230
           K MASYLFS T+   L +  Q++LL+AT+ SD+YDI+L+IL++ P LA  R      ETA
Sbjct: 234 KQMASYLFSVTDRKQLTSQDQIELLIATIHSDFYDISLEILERNPKLAIMRDTKNNNETA 293

Query: 231 LHLLSRKPNAIGSSNKLCFWKKYINS 255
           LH+L+RKP+AI S +++  WKK INS
Sbjct: 294 LHVLARKPSAISSKSEISIWKKPINS 315

[Close]

BLAST of CSPI01G10360.1 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSN 110
           V+L++AALKGDW+AAN I  +    I +KIT +  T LHIA A KH  FV  L+    SN
Sbjct: 89  VQLYQAALKGDWKAANGIIIEQKYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESN 148

Query: 111 GFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLK 170
             DLA++N DG TAL +AA SG+V IA+ +++ +  L  P+     K  P+  +  +   
Sbjct: 149 --DLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDL--PMIRGGGKTTPIHMAALFGHG 208

Query: 171 DMASYLFSQTNFNDLQTNQQLDLLLATVDSDYY 204
           +M  YL+  T F +    + ++L  A + +D Y
Sbjct: 209 EMVKYLYKNTRFREFNDEEFVNLFHAVISADIY 237

[Close]

BLAST of CSPI01G10360.1 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-23
Identity = 65/208 (31.25%), Postives = 114/208 (54.81%), Query Frame = 1


Query: 53  LHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGF 112
           +++A L GDW+ A+ +  +    + ++IT     ALHIA A KH  FV  L++    +  
Sbjct: 54  MYKAVLTGDWKTASTLISRKECNVVEQITGNSEIALHIAVAAKHKDFVRNLLR--EMDPP 113

Query: 113 DLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLK-YVPLLSSVFYKLKD 172
           DL++KN+DG T L++AA  G +  AE ++   + +RD  D ++ K   P+  +  Y   +
Sbjct: 114 DLSLKNKDGNTPLSFAAALGDIETAEMLI---NMIRDLPDISNEKTMTPIHIAALYGHGE 173

Query: 173 MASYLFSQTNFNDLQTNQQLDLLLATVDSDYYDIALDI---LKKKPDLAKERVG--GTGE 232
           M  YLFS+T+  DL   Q L+L    + +D Y +  D+   + ++ DL ++ +       
Sbjct: 174 MVQYLFSKTSIKDLNDQQYLNLFHTMISADIYGVFADVPLWMLERVDLYRKELALYPNSN 233

Query: 233 TALHLLSRKPNAIGSSNKLCFWKKYINS 255
            ALHLL+RK +AI   ++L  +++  +S
Sbjct: 234 KALHLLARKTSAISHKSQLNLFQQVASS 256

[Close]

BLAST of CSPI01G10360.1 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 81.3 bits (199), Expect = 9.8e-16
Identity = 60/191 (31.41%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 60  GDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNR 119
           G+ EA  +   ++   +T  +T   +T +H A    HI  VE++++        L IKN 
Sbjct: 60  GELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKND 119

Query: 120 DGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQ 179
           +G TAL YAA  GIVRIAE +V+    L   V +A  +++P++ +  Y  K +  YL+S 
Sbjct: 120 NGYTALTYAATGGIVRIAECLVNKCPGLVS-VRNAK-EHIPIVVASLYGHKHLVQYLYSH 179

Query: 180 TNFNDLQTNQQLD---------LLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALH 239
           T  +DL      D         L+   +    Y IALD++++ P LA  R     +TA+ 
Sbjct: 180 TPLSDLDPCDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPKLAYTR-DSDNDTAIM 239

Query: 240 LLSRKPNAIGS 242
            L++ P A  S
Sbjct: 240 ALAQTPYAFPS 247

[Close]

BLAST of CSPI01G10360.1 vs. NCBI nr
Match: gi|778664848|ref|XP_011648415.1| (PREDICTED: uncharacterized protein LOC101205777 [Cucumis sativus])

HSP 1 Score: 500.7 bits (1288), Expect = 1.5e-138
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKPNAIG 240
           NFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKPNAIG
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKPNAIG 240

Query: 241 SSNKLCFWKKYINSRN 257
           SSNKLCFWKKYINSRN
Sbjct: 241 SSNKLCFWKKYINSRN 256

[Close]

BLAST of CSPI01G10360.1 vs. NCBI nr
Match: gi|659067691|ref|XP_008440794.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 6.2e-121
Identity = 231/258 (89.53%), Postives = 240/258 (93.02%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQT---SVADTVVINIIDGQGASMESKENIKNAVKLHEAA 60
           MGSS LTSDD ISYFPSSS SQT   SVAD VVI I D QGASMESKENIKNAVKLH+AA
Sbjct: 1   MGSSVLTSDDHISYFPSSSRSQTTDNSVADDVVIKITDEQGASMESKENIKNAVKLHQAA 60

Query: 61  LKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIK 120
           LKGDWEAAN+IFKKD+SWITKKITIRENTALHIAAA KHISFVEKLVKLYSSN FDLAIK
Sbjct: 61  LKGDWEAANDIFKKDTSWITKKITIRENTALHIAAAAKHISFVEKLVKLYSSNDFDLAIK 120

Query: 121 NRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLF 180
           NRDGR ALAYAA+SGIVRIAETIVDNDHKLRDPVDDAHLKY+PLLSSVFYKLKDMASYLF
Sbjct: 121 NRDGRPALAYAAISGIVRIAETIVDNDHKLRDPVDDAHLKYLPLLSSVFYKLKDMASYLF 180

Query: 181 SQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKPN 240
           SQTNF+ LQT QQL+LLLATVDSDYYDIALDILKKKP+LAKERV   GETALHLL+RKPN
Sbjct: 181 SQTNFDALQTTQQLNLLLATVDSDYYDIALDILKKKPELAKERVEENGETALHLLARKPN 240

Query: 241 AIGSSNKLCFWKKYINSR 256
           AIGSSNKLCFWKKYINSR
Sbjct: 241 AIGSSNKLCFWKKYINSR 258

[Close]

BLAST of CSPI01G10360.1 vs. NCBI nr
Match: gi|659067689|ref|XP_008440786.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 4.2e-109
Identity = 214/257 (83.27%), Postives = 229/257 (89.11%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQT---SVADTVVINIIDGQGASMESKENIKNAVKLHEAA 60
           MGSS LTSDD ISYFPSSS SQT   SVAD VVI I D QGASMESKENIKNAVKLH+AA
Sbjct: 1   MGSSVLTSDDHISYFPSSSRSQTTDNSVADDVVIKITDEQGASMESKENIKNAVKLHQAA 60

Query: 61  LKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIK 120
           LKGDWEAAN+IFKKD+SWITKKITIRENTALHIAAA KHISFVEKLVKLYSSN FDLAIK
Sbjct: 61  LKGDWEAANDIFKKDTSWITKKITIRENTALHIAAAAKHISFVEKLVKLYSSNDFDLAIK 120

Query: 121 NRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLF 180
           NRDGR ALAYAA+SGIVRIAETIVDNDHKLRDPVDDAHLKY+PLLSSVFYKLKDMASYLF
Sbjct: 121 NRDGRPALAYAAISGIVRIAETIVDNDHKLRDPVDDAHLKYLPLLSSVFYKLKDMASYLF 180

Query: 181 SQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKPN 240
           SQTNF+ LQT QQL+LLLATVDSDYYD+A  ILK KP+LAKER    G TALH+L+ KP+
Sbjct: 181 SQTNFDALQTTQQLNLLLATVDSDYYDVAFQILKLKPELAKER-NEEGFTALHVLASKPS 240

Query: 241 AIGSSNKLCFWKKYINS 255
           AI SS +L  WKK++NS
Sbjct: 241 AISSSKELSSWKKHMNS 256

[Close]

BLAST of CSPI01G10360.1 vs. NCBI nr
Match: gi|700209398|gb|KGN64494.1| (hypothetical protein Csa_1G059730 [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 1.9e-106
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYY 204
           NFNDLQTNQQLDLLLATVDSDYY
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYY 203

[Close]

BLAST of CSPI01G10360.1 vs. NCBI nr
Match: gi|659067681|ref|XP_008440746.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69
Identity = 159/260 (61.15%), Postives = 187/260 (71.92%), Query Frame = 1


Query: 7   TSDDPISYFPSSSPSQT----SVADTVVINIIDGQGASMESK--ENIKNAVKLHEAALKG 66
           TSD   S F SS+ S T    S   +  +NI D QG +ME+K   NIK A++L++AALKG
Sbjct: 8   TSDGHNSSFSSSTRSHTTDTTSATQSTFVNINDEQGTTMENKGNNNIKKAIELYQAALKG 67

Query: 67  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 126
           DWEAA  IFK+DSSWITKKITI++NTALH+AAA K I FVE+LVKLY SN  DL IKN +
Sbjct: 68  DWEAAKGIFKEDSSWITKKITIKKNTALHVAAAAKRIGFVEELVKLYCSNNHDLFIKNGE 127

Query: 127 GRTALAYAAVSGIVRIAETIVDNDHKL--RDPVDDAHL--KYVPLLSSVFYKLKDMASYL 186
           G TAL YAA+SG+VRIAE IV ND +      V+ AHL   YVPLL++V YK K+MASYL
Sbjct: 128 GHTALFYAAISGVVRIAEAIVKNDDQRPGNSDVNYAHLIEYYVPLLTAVIYKRKEMASYL 187

Query: 187 FSQTNFNDLQTNQQLDLLLATVDSDYYDIALDILKKKPDLAKERVGGTGETALHLLSRKP 246
           FS +    LQ  QQ  LLLAT+DSDYYDIALDILK K  LAK R    G+TALHLL+RKP
Sbjct: 188 FSLSK-EVLQPEQQFQLLLATIDSDYYDIALDILKVKSGLAKWREKENGDTALHLLARKP 247

Query: 247 NAIGSSNKLCFWKKYINSRN 257
            AIGSSN+L   KKYI+  N
Sbjct: 248 YAIGSSNQLSCLKKYISRFN 266

The following BLAST results are available for this feature:

BLAST of CSPI01G10360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G10360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU57_CUCSA	1.3e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1	[more]
A0A0A0LRZ3_CUCSA	3.7e-56	62.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1	[more]
A0A0A0LRU9_CUCSA	1.1e-52	55.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1	[more]
A0A0A0LWY1_CUCSA	5.6e-44	55.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1	[more]
A0A0A0LU19_CUCSA	2.6e-41	47.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1	[more]

BLAST of CSPI01G10360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	3.7e-23	38.56	Ankyrin repeat family protein	[more]
AT3G54070.1	4.9e-23	31.25	Ankyrin repeat family protein	[more]
AT3G18670.1	9.8e-16	31.41	Ankyrin repeat family protein	[more]

BLAST of CSPI01G10360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664848\|ref\|XP_011648415.1\|	1.5e-138	100.00	PREDICTED: uncharacterized protein LOC101205777 [Cucumis sativus]	[more]
gi\|659067691\|ref\|XP_008440794.1\|	6.2e-121	89.53	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis ...	[more]
gi\|659067689\|ref\|XP_008440786.1\|	4.2e-109	83.27	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis ...	[more]
gi\|700209398\|gb\|KGN64494.1\|	1.9e-106	100.00	hypothetical protein Csa_1G059730 [Cucumis sativus]	[more]
gi\|659067681\|ref\|XP_008440746.1\|	2.5e-69	61.15	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G10360	CSPI01G10360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G10360.1	CSPI01G10360.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G10360.mrna.cds.3	CSPI01G10360.mrna.cds.3	CDS
CSPI01G10360.mrna.cds.2	CSPI01G10360.mrna.cds.2	CDS
CSPI01G10360.mrna.cds.1	CSPI01G10360.mrna.cds.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 83..119 score: 8
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 50..235 score: 1.2
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 53..144 score: 2.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 30..231 score: 16
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 46..231 score: 3.37
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 53..255 score: 5.7
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 53..255 score: 5.7