CSPI01G02670.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G02670.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr1 : 1706387 .. 1707589 (+)
Sequence length	1203

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATGCCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATACCAATGGAGACGTCTTTACTCCCTACCTGGTGGTGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATATTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTCTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCGGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

mRNA sequence

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATGCCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATACCAATGGAGACGTCTTTACTCCCTACCTGGTGGTGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATATTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTCTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCGGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Coding sequence (CDS)

ATGGAGATTACGGATTGGGTTAGTGGGCTTCCATCCGATATTGGTAAGACAATCTTCTCCAAACTTCTTGTTTCCAATTTACCAGCTTGTAGAGTTGTATGTAAAGCTTGGAATGAGTTGATTTTAGATCATGCTTCCTCAGCTTCTAAATTCCTTACAAATGATTTCATTCTATTTACCTGTGATGTACTCCATCCCTTCCCCTGTCCTGATAATCATGCCAATCCCAACATGCATTGTTTACGTTTTGATAATTTAGATTTGGATTTGGATTTGGATTTAGAATTGGAAGTGAATAAATCCTCCAGCTTTGAGGCCGGCGTCGTTTACAAACTCATTAATTCTTGCAATGGCCTCCTGCTTATCTACAAACTCCCTCTTTGTTTCCCCGGCGAATTCCTTTTGCGTGTCGGCATATTTAATCCAATGACCAATGAGTTCTTCCAAGTTCCTCATGATGAGATTGTTGAGTACCATTATGGGTTTGGTTTCATCCCTGCCACAAAGCAGTACAAATTATTTAGAGTCAACTTCCCGCTTAATGTACGGCCGGAAGAACCCAATTCTGTTTCTCACTTGGATGTTTTGACGTTTGGTAGAAGTGAAATCATCGACCCTAAACAATACCAATGGAGACGTCTTTACTCCCTACCTGGTGGTGTCGAGAATCATGGTGCTCATGTGAATGGAGTTATCTATTGGTTGGGAGAAGGAAAAGAACAAAATGAGTATGTGGTGTATACTCTCGACGTTGAAACTGAAAAAATTCAATTAAGTGCTGTCTTGGAAGTTGTCAATCCCATGTGGATGTCTATACAACAATTTAATGGTACTGTTTATGCAGTTTTTCATATGGAAGAAGCAACTCAAGTGTGGAGGATGCAGGAGAAAAACTCATGGATTAGAGATTTTGTTATTGATGATTGCAACCTTACTCTCGTGAAAGCCTATGAAAATGGTGAGATATTGTGTATGGTCAAACCAACCGTTTTTTGGTTGTATAATCCTTCAACCGGGAGTAAGAAGGTTCTATCACTCAGGAATGAGAAAAAGATATTTCTAGGCATTTGTCACCTAGAATTGAATTTTGGCTCTCTTCTAAACATTTTGGCGGGTGATGAGAGTGTTGATGAAGTTCTAATTAAGAGAAACAAAGCAAAGAGAAGCAGAAGCAAAGCAAAGAGAAGCAGAAGCCATGGATGA

Homology

[Close]

BLAST of CSPI01G02670.1 vs. Swiss-Prot
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 100/421 (23.75%), Postives = 157/421 (37.29%), Query Frame = 1


Query: 2   EITDWVSG---------LPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHA--SSASK 61
           +ITD V G         LP DI   IFS+L +S++     VC++W  ++  H   SS+S 
Sbjct: 11  KITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSS 70

Query: 62  FLTNDFILFTCDVLHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVV- 121
             T   +L  CD            +P  + L F      LDL  E +  K+  F      
Sbjct: 71  SPTKPCLLLHCD------------SPIRNGLHF------LDLSEEEKRIKTKKFTLRFAS 130

Query: 122 ----YKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP------HDEIVEYH 181
               + ++ SCNGLL +          +   + ++NP T    ++P      HD+  E  
Sbjct: 131 SMPEFDVVGSCNGLLCL------SDSLYNDSLYLYNPFTTNSLELPECSNKYHDQ--ELV 190

Query: 182 YGFGFIPATKQYKLFRV----------NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQY 241
           +GFGF   TK+YK+ ++          N     R       S + +LT   S     +  
Sbjct: 191 FGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTL--SSKTTDQSL 250

Query: 242 QWRRLYSLPGGV--ENHGAHVNGVIYWLGEGKE---QNEYVVYTLDVETEKIQLSAVLEV 301
            WR L   P      +  A VNG ++++   +      ++V + L+ E  K         
Sbjct: 251 SWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGG 310

Query: 302 VNPMWMSIQQFNGTVYAVFHMEEA-TQVWRMQE---KNSWIRDFVIDDC----------- 359
           +N     +    G + AV +       +W M+    K SW +++ I              
Sbjct: 311 LNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDR 370

[Close]

BLAST of CSPI01G02670.1 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 3.7e-236
Identity = 397/400 (99.25%), Postives = 398/400 (99.50%), Query Frame = 1


Query: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60
           MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT
Sbjct: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60

Query: 61  CDVLHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120
           CDVLHPFPCPDNH NPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL
Sbjct: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120

Query: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180
           LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL
Sbjct: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180

Query: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQYQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240
           NVRPEEPNSVSHLDVLTFGRSEIIDPKQ QWRRLYSLPGGVENHGAHVNGVIYWLGEGKE
Sbjct: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240

Query: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300
           QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW
Sbjct: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300

Query: 301 IRDFVIDDCNLTLVKAYENGEILCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360
           IRDFVIDDCNLTLVKAYENGE+LCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE
Sbjct: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360

Query: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 401
           LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG
Sbjct: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 400

[Close]

BLAST of CSPI01G02670.1 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-75
Identity = 180/395 (45.57%), Postives = 237/395 (60.00%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDVLHPF 68
           GLP  I KTIFSKL++S+LP+CR+V   WN+L+LD+ASS   +FL N F+L T D    +
Sbjct: 25  GLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLSTSDRGLNY 84

Query: 69  PCPDNHANPNMHCLRFDNLDL--DLDLDLELEVNKSSS--FEAGVVYKLI--NSCNGLLL 128
                  NP MHC+  D   L  D D DLE E  KS+S  F+    Y +I   SCNGL+L
Sbjct: 85  KL----CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLML 144

Query: 129 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNFP 188
           I K       ++    GIFNPMTNEF QV      +  Y YGFGF P TKQYKLFRV F 
Sbjct: 145 ISKC-----SDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRV-FD 204

Query: 189 LNVRPEEPNSV--SH--LDVLTFGRSEIID--PKQYQWRRLYSLPGGVENHGAHVNGVIY 248
              R    +S   +H  ++VLTFGRS      P   QWRRL++LP  +   G ++NG+IY
Sbjct: 205 KGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGIIY 264

Query: 249 WLGEGK---EQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHM----- 308
           WL + K   ++ +YV+Y LDVETE I+++ VL+V +  +  I QFNGT+YA FH+     
Sbjct: 265 WLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEKD 324

Query: 309 EEATQVWRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEILCMVKPTVFWLYNPSTGS 368
               QVWRMQEK+SW+R FVI D      +L L+K +E+ EIL M+    F  YNPS+  
Sbjct: 325 SRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPSSKK 384

Query: 369 KKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGDE 375
           K+++S   +KK +  IC +E LNFG L  IL G +
Sbjct: 385 KRIISKNQKKKRY--ICQIESLNFGRLSQILEGTQ 407

[Close]

BLAST of CSPI01G02670.1 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-74
Identity = 176/400 (44.00%), Postives = 234/400 (58.50%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I KTIFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDR 96

Query: 65  LHPFPCPDNHANPNMHCLRFDNLDL--DLDLDLELEVNKSSSFEA----GVVYKLINSCN 124
           +  +       NP MHC+  DN     D+D DLE E  KS S +       +  L + CN
Sbjct: 97  MLNYEL----CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPCN 156

Query: 125 GLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFR 184
           GL+ I K       ++    GIFNPMTNEFFQV   +  +  YHYGFG    +KQYKLFR
Sbjct: 157 GLMFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFR 216

Query: 185 VN--------FPLNVRPEEPNSVSHLDVLTFGRSEIID-PKQYQWRRLYSLPGGVENHGA 244
           V+        F L +     ++   ++VLTFGRS     P   QWR L++L   +  HG 
Sbjct: 217 VSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDL-IHGV 276

Query: 245 HVNGVIYWLGE---GKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVF 304
           ++NG+IYWLG+    KE+ EYV+Y LDVETE+I++S +L+ V      +  FNGT+YA+F
Sbjct: 277 YLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQ-VQASDGKMHPFNGTIYALF 336

Query: 305 HM-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEILCMVKPTVFWL 364
           ++         QVW MQEK SWIR FVI D +     L L+K +E+GEIL ++    F  
Sbjct: 337 YINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF 396

Query: 365 YNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           Y+P T  K+++S   +K  F  +C +E LNFGSL  IL G
Sbjct: 397 YHPLTEKKRIISKNQKKNRF--VCQIECLNFGSLPEILEG 423

[Close]

BLAST of CSPI01G02670.1 vs. TrEMBL
Match: A0A0A0LUP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.4e-64
Identity = 164/399 (41.10%), Postives = 226/399 (56.64%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I K IFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDQ 96

Query: 65  LHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEA----GVVYKLINSCNGL 124
           +  +       NP MH +  DN     D+DLE+E  KS SF+       +  + + CNGL
Sbjct: 97  MLNYEL----CNPKMHSINLDNTQCSDDVDLEMEFIKSGSFQFYGDWTFMILMAHPCNGL 156

Query: 125 LLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVN 184
           + I K       ++    GIFNPMTNEFFQV   +  +  Y+YGFG  P TKQYKLFR +
Sbjct: 157 VFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGLSPVTKQYKLFRTS 216

Query: 185 --FPLNVRPEEPNSVS------HLDVLTFGRSEIID-PKQYQWRRLYSLPGG--VENHGA 244
              P + R    ++ S       ++VLTFGRS     P   QWR L++L     V + G 
Sbjct: 217 KAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIHNQWRHLHNLSYDIVVGDGGV 276

Query: 245 HVNGVIY-WLGEG-KEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFH 304
           ++NG+I+ W  +  K + +Y +Y LD ETE+I++S +L+ V+     +  FNGT+YA F+
Sbjct: 277 YLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSVILQ-VHARDGKMHLFNGTIYATFY 336

Query: 305 M-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEILCMVKPTVFWLY 364
                 +   QVW MQEK+SWIR FVI D +     L L+K +++G+I        F+ Y
Sbjct: 337 TNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFKDGDI-----SDFFYFY 396

Query: 365 NPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           NP T  K ++S   +KK    +C +E LNFGSL  I  G
Sbjct: 397 NPLTKKKSIISKDQKKKSC--VCQIECLNFGSLPKIFDG 418

[Close]

BLAST of CSPI01G02670.1 vs. TrEMBL
Match: A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 168/397 (42.32%), Postives = 225/397 (56.68%), Query Frame = 1


Query: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTC 62
           I DW   LP+ IG TIFSKL++SNLP CR+VC+ WN ++LD+AS+   + LT   ++ T 
Sbjct: 15  IMDW-GRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTN 74

Query: 63  DVLHPFPCPDNHANPN--MHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 122
           D    F    +  N N  M C+ FD   +L  + DLD EL  + S  F+      +I+ C
Sbjct: 75  DEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQC 134

Query: 123 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP-HDEIVEYHYGFGFIPATKQYKLFR 182
           NGLL +      + G  L   GIFNPMTNEF Q+P HDE      GFG   +TKQYKLFR
Sbjct: 135 NGLLYVITNNYEYHG--LYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFR 194

Query: 183 V--NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQYQWRRLYSL--PGGVENHGAHVNGV 242
           V   FP   R  E      +DVL FG          +WR L  L  P  V    A++NGV
Sbjct: 195 VRTTFP---RGGEGRKGMEMDVLRFGNDN-------KWRYLPFLPSPSHVFVCSAYLNGV 254

Query: 243 IYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYAVF--HME 302
           IYWLG+ + ++NE V++  DVETEK + S +L+V  V+   +++ +F  T+YA F     
Sbjct: 255 IYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTY 314

Query: 303 EATQVWRMQEKNSWIRD-FVIDDC-----NLTLVKAYENGE-ILCMVKPTVFWLYNPSTG 362
           ++ QVW+MQEK SWI +  V+DD      +LT+++A E+ E ILCMV    F  YN   G
Sbjct: 315 DSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFG 374

Query: 363 --SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGD 374
              KKV+    EK  F  I  +E LNFGSL NIL+G+
Sbjct: 375 RRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 398

[Close]

BLAST of CSPI01G02670.1 vs. TAIR10
Match: AT3G07870.1 (AT3G07870.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-12
Identity = 100/421 (23.75%), Postives = 157/421 (37.29%), Query Frame = 1


Query: 2   EITDWVSG---------LPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHA--SSASK 61
           +ITD V G         LP DI   IFS+L +S++     VC++W  ++  H   SS+S 
Sbjct: 11  KITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSS 70

Query: 62  FLTNDFILFTCDVLHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVV- 121
             T   +L  CD            +P  + L F      LDL  E +  K+  F      
Sbjct: 71  SPTKPCLLLHCD------------SPIRNGLHF------LDLSEEEKRIKTKKFTLRFAS 130

Query: 122 ----YKLINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP------HDEIVEYH 181
               + ++ SCNGLL +          +   + ++NP T    ++P      HD+  E  
Sbjct: 131 SMPEFDVVGSCNGLLCL------SDSLYNDSLYLYNPFTTNSLELPECSNKYHDQ--ELV 190

Query: 182 YGFGFIPATKQYKLFRV----------NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQY 241
           +GFGF   TK+YK+ ++          N     R       S + +LT   S     +  
Sbjct: 191 FGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTL--SSKTTDQSL 250

Query: 242 QWRRLYSLPGGV--ENHGAHVNGVIYWLGEGKE---QNEYVVYTLDVETEKIQLSAVLEV 301
            WR L   P      +  A VNG ++++   +      ++V + L+ E  K         
Sbjct: 251 SWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGG 310

Query: 302 VNPMWMSIQQFNGTVYAVFHMEEA-TQVWRMQE---KNSWIRDFVIDDC----------- 359
           +N     +    G + AV +       +W M+    K SW +++ I              
Sbjct: 311 LNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDR 370

[Close]

BLAST of CSPI01G02670.1 vs. TAIR10
Match: AT1G33020.1 (AT1G33020.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 52.4 bits (124), Expect = 7.6e-07
Identity = 58/263 (22.05%), Postives = 108/263 (41.06%), Query Frame = 1


Query: 7   VSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDF----ILFTCD 66
           +  +P+D+   IFS++   ++  CR V K W  + L H      FLT       +LF   
Sbjct: 7   LDSIPTDLILEIFSRMSTKSIGRCRCVSKLWKSM-LGHPYFTELFLTRSSDHPRLLFGVK 66

Query: 67  -----VLHPFPCP-DNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 126
                +    P P D +   ++     +  D  ++   ++  N+ + + +G +Y      
Sbjct: 67  RERQWLFFSSPQPQDLYEKSSLVDFHMNFSDFHMNFSGDIRRNECT-YVSGFIYFPRKRI 126

Query: 127 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRV 186
              L  +++             I NP+T ++  +      E     GF P  KQ+K+ R+
Sbjct: 127 KNYLCDFRV-------------ICNPITGQYAILQLITFHEKRSFLGFDPIDKQFKVLRM 186

Query: 187 NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQYQWRRLYSLPGGVENHGAHV--NGVIYW 246
            +       +   V H  +LT      ++P + +WR++   P   E     +  NGV+Y+
Sbjct: 187 KY------NDRGIVVH-HILT------LEPGKMRWRKI-RCPLAHEPFWEEICANGVLYY 240

Query: 247 LGEGKEQNEYVVYTLDVETEKIQ 258
           L E  +   YV+   DV +EK +
Sbjct: 247 LAEPTDGGSYVICCFDVRSEKFK 240

[Close]

BLAST of CSPI01G02670.1 vs. NCBI nr
Match: gi|778664711|ref|XP_011660339.1| (PREDICTED: putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 825.1 bits (2130), Expect = 5.3e-236
Identity = 397/400 (99.25%), Postives = 398/400 (99.50%), Query Frame = 1


Query: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60
           MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT
Sbjct: 1   MEITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFT 60

Query: 61  CDVLHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120
           CDVLHPFPCPDNH NPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL
Sbjct: 61  CDVLHPFPCPDNHTNPNMHCLRFDNLDLDLDLDLELEVNKSSSFEAGVVYKLINSCNGLL 120

Query: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180
           LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL
Sbjct: 121 LIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHYGFGFIPATKQYKLFRVNFPL 180

Query: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQYQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240
           NVRPEEPNSVSHLDVLTFGRSEIIDPKQ QWRRLYSLPGGVENHGAHVNGVIYWLGEGKE
Sbjct: 181 NVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 240

Query: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300
           QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW
Sbjct: 241 QNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHMEEATQVWRMQEKNSW 300

Query: 301 IRDFVIDDCNLTLVKAYENGEILCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360
           IRDFVIDDCNLTLVKAYENGE+LCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE
Sbjct: 301 IRDFVIDDCNLTLVKAYENGEMLCMVKPTVFWLYNPSTGSKKVLSLRNEKKIFLGICHLE 360

Query: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 401
           LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG
Sbjct: 361 LNFGSLLNILAGDESVDEVLIKRNKAKRSRSKAKRSRSHG 400

[Close]

BLAST of CSPI01G02670.1 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 180/395 (45.57%), Postives = 237/395 (60.00%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDVLHPF 68
           GLP  I KTIFSKL++S+LP+CR+V   WN+L+LD+ASS   +FL N F+L T D    +
Sbjct: 25  GLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQFLKNAFLLSTSDRGLNY 84

Query: 69  PCPDNHANPNMHCLRFDNLDL--DLDLDLELEVNKSSS--FEAGVVYKLI--NSCNGLLL 128
                  NP MHC+  D   L  D D DLE E  KS+S  F+    Y +I   SCNGL+L
Sbjct: 85  KL----CNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTYTIIMAGSCNGLML 144

Query: 129 IYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNFP 188
           I K       ++    GIFNPMTNEF QV      +  Y YGFGF P TKQYKLFRV F 
Sbjct: 145 ISKC-----SDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRV-FD 204

Query: 189 LNVRPEEPNSV--SH--LDVLTFGRSEIID--PKQYQWRRLYSLPGGVENHGAHVNGVIY 248
              R    +S   +H  ++VLTFGRS      P   QWRRL++LP  +   G ++NG+IY
Sbjct: 205 KGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGIIY 264

Query: 249 WLGEGK---EQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFHM----- 308
           WL + K   ++ +YV+Y LDVETE I+++ VL+V +  +  I QFNGT+YA FH+     
Sbjct: 265 WLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHINWEKD 324

Query: 309 EEATQVWRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEILCMVKPTVFWLYNPSTGS 368
               QVWRMQEK+SW+R FVI D      +L L+K +E+ EIL M+    F  YNPS+  
Sbjct: 325 SRTIQVWRMQEKDSWVRKFVICDISREWIHLQLIKMFEDEEILFMINMDFFCFYNPSSKK 384

Query: 369 KKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGDE 375
           K+++S   +KK +  IC +E LNFG L  IL G +
Sbjct: 385 KRIISKNQKKKRY--ICQIESLNFGRLSQILEGTQ 407

[Close]

BLAST of CSPI01G02670.1 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74
Identity = 176/400 (44.00%), Postives = 234/400 (58.50%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I KTIFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDR 96

Query: 65  LHPFPCPDNHANPNMHCLRFDNLDL--DLDLDLELEVNKSSSFEA----GVVYKLINSCN 124
           +  +       NP MHC+  DN     D+D DLE E  KS S +       +  L + CN
Sbjct: 97  MLNYEL----CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQFYGDWTFMILLAHPCN 156

Query: 125 GLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFR 184
           GL+ I K       ++    GIFNPMTNEFFQV   +  +  YHYGFG    +KQYKLFR
Sbjct: 157 GLMFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYHYGFGLSAISKQYKLFR 216

Query: 185 VN--------FPLNVRPEEPNSVSHLDVLTFGRSEIID-PKQYQWRRLYSLPGGVENHGA 244
           V+        F L +     ++   ++VLTFGRS     P   QWR L++L   +  HG 
Sbjct: 217 VSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWRHLHNLSCDL-IHGV 276

Query: 245 HVNGVIYWLGE---GKEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVF 304
           ++NG+IYWLG+    KE+ EYV+Y LDVETE+I++S +L+ V      +  FNGT+YA+F
Sbjct: 277 YLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQ-VQASDGKMHPFNGTIYALF 336

Query: 305 HM-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEILCMVKPTVFWL 364
           ++         QVW MQEK SWIR FVI D +     L L+K +E+GEIL ++    F  
Sbjct: 337 YINWEKDSRTIQVWSMQEKCSWIRQFVIRDISKEWGCLELIKIFEDGEILFLIDSDFFCF 396

Query: 365 YNPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           Y+P T  K+++S   +K  F  +C +E LNFGSL  IL G
Sbjct: 397 YHPLTEKKRIISKNQKKNRF--VCQIECLNFGSLPEILEG 423

[Close]

BLAST of CSPI01G02670.1 vs. NCBI nr
Match: gi|659120418|ref|XP_008460183.1| (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 171/390 (43.85%), Postives = 222/390 (56.92%), Query Frame = 1


Query: 9   GLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSASKFLTNDFILFTCDVLHPFP 68
           GLP  I + I   +++SN P  RVV K WN  ILD+A   S    N F+L TCD      
Sbjct: 9   GLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNANAFLLSTCD-----R 68

Query: 69  CPDNH-ANPNMHCLRFDNLDLDLDLDLELE-VNKSSSFEAGVVYKLI----NSCNGLLLI 128
            P+N   N  MHC+RFD     LD DLE E   KS S      +  I    NSCNGL+ I
Sbjct: 69  TPNNKDLNHKMHCIRFDTTT-HLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 128

Query: 129 YKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVNFPL 188
            K        F    GIFNPMTNEFFQ+P  E+    Y Y  GF P TKQYKLFRV    
Sbjct: 129 CKCAF-----FTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESF 188

Query: 189 NVRPEEPNSVSHLDVLTFGRSEIIDPKQYQWRRLYSLPGGVENHGAHVNGVIYWLGEGKE 248
            +  +  N+ S +DVLTF R    +    QWRRL+SLP  + N GA++NGVIYW+G  ++
Sbjct: 189 FLDGDADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRIHN-GAYLNGVIYWIGTKED 248

Query: 249 -QNEYVVYTLDVETEKIQLSAVLEV---VNPMWMSIQQFNGTVYAVFHMEEAT-----QV 308
            +NEY++Y ++VETE I+LS +L++         S++QFN +VYA F +   T     QV
Sbjct: 249 KENEYIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQV 308

Query: 309 WRMQEKNSWIRDFVIDD-----CNLTLVKAYENGEILCMVKPTVFWLYNPSTGSKKVLSL 368
           WRMQEK+ WIR+FVI D      +LTL+KA+E+GEIL        W        +K +  
Sbjct: 309 WRMQEKDLWIREFVIVDIPINWSSLTLIKAFEDGEIL--------W--------RKKIVT 368

Query: 369 RNEKKIFLGICHLE-LNFGSLLNILAGDES 376
           +N+KK    +C +E LNFG L NILAG+E+
Sbjct: 369 KNQKK-DRRVCQIEYLNFGLLQNILAGEET 369

[Close]

BLAST of CSPI01G02670.1 vs. NCBI nr
Match: gi|700208650|gb|KGN63746.1| (hypothetical protein Csa_1G014430 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 4.9e-64
Identity = 164/399 (41.10%), Postives = 226/399 (56.64%), Query Frame = 1


Query: 5   DWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTCDV 64
           DW  GLP  I K IFSKL++SNLP+CR VCK WN L+L +ASS   +FLTN F+L T D 
Sbjct: 37  DWGKGLPPLIAKIIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQLQFLTNAFLLSTSDQ 96

Query: 65  LHPFPCPDNHANPNMHCLRFDNLDLDLDLDLELEVNKSSSFEA----GVVYKLINSCNGL 124
           +  +       NP MH +  DN     D+DLE+E  KS SF+       +  + + CNGL
Sbjct: 97  MLNYEL----CNPKMHSINLDNTQCSDDVDLEMEFIKSGSFQFYGDWTFMILMAHPCNGL 156

Query: 125 LLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVE--YHYGFGFIPATKQYKLFRVN 184
           + I K       ++    GIFNPMTNEFFQV   +  +  Y+YGFG  P TKQYKLFR +
Sbjct: 157 VFISKC-----SDYTWCQGIFNPMTNEFFQVSEQDTFDDFYNYGFGLSPVTKQYKLFRTS 216

Query: 185 --FPLNVRPEEPNSVS------HLDVLTFGRSEIID-PKQYQWRRLYSLPGG--VENHGA 244
              P + R    ++ S       ++VLTFGRS     P   QWR L++L     V + G 
Sbjct: 217 KAIPYSKRFRLVSTCSTDDTHYMMEVLTFGRSGTNHIPIHNQWRHLHNLSYDIVVGDGGV 276

Query: 245 HVNGVIY-WLGEG-KEQNEYVVYTLDVETEKIQLSAVLEVVNPMWMSIQQFNGTVYAVFH 304
           ++NG+I+ W  +  K + +Y +Y LD ETE+I++S +L+ V+     +  FNGT+YA F+
Sbjct: 277 YLNGIIFGWEKKNVKRKRKYDIYALDDETEQIEMSVILQ-VHARDGKMHLFNGTIYATFY 336

Query: 305 M-----EEATQVWRMQEKNSWIRDFVIDDCN-----LTLVKAYENGEILCMVKPTVFWLY 364
                 +   QVW MQEK+SWIR FVI D +     L L+K +++G+I        F+ Y
Sbjct: 337 TNWEKDDLTVQVWSMQEKHSWIRKFVISDISKQWSCLELIKMFKDGDI-----SDFFYFY 396

Query: 365 NPSTGSKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAG 373
           NP T  K ++S   +KK    +C +E LNFGSL  I  G
Sbjct: 397 NPLTKKKSIISKDQKKKSC--VCQIECLNFGSLPKIFDG 418

The following BLAST results are available for this feature:

BLAST of CSPI01G02670.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB135_ARATH	1.4e-10	23.75	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	[more]

BLAST of CSPI01G02670.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSE0_CUCSA	3.7e-236	99.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]
A0A0A0LWG1_CUCSA	1.9e-75	45.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	1.6e-74	44.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LUP7_CUCSA	3.4e-64	41.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014430 PE=4 SV=1	[more]
A0A0A0LRY6_CUCSA	2.5e-59	42.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1	[more]

BLAST of CSPI01G02670.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07870.1	7.9e-12	23.75	F-box and associated interaction domains-containing protein	[more]
AT1G33020.1	7.6e-07	22.05	F-box and associated interaction domains-containing protein	[more]

BLAST of CSPI01G02670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664711\|ref\|XP_011660339.1\|	5.3e-236	99.25	PREDICTED: putative F-box protein At1g32420 [Cucumis sativus]	[more]
gi\|700210076\|gb\|KGN65172.1\|	2.8e-75	45.57	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]
gi\|700208649\|gb\|KGN63745.1\|	2.3e-74	44.00	hypothetical protein Csa_1G014420 [Cucumis sativus]	[more]
gi\|659120418\|ref\|XP_008460183.1\|	2.0e-65	43.85	PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]	[more]
gi\|700208650\|gb\|KGN63746.1\|	4.9e-64	41.10	hypothetical protein Csa_1G014430 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR011043	Gal_Oxase/kelch_b-propeller
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G02670	CSPI01G02670	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G02670.1	CSPI01G02670.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G02670.1.cds1	CSPI01G02670.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 7..43 score: 4.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 10..50 score: 2.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 5..58 score: 5.4
IPR011043	Galactose oxidase/kelch, beta-propeller	unknown	SSF50965	Galactose oxidase, central domain	coord: 187..340 score: 1.01E-5coord: 134..159 score: 1.0
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 227..326 score: 1.
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 115..315 score: 1.5
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 5..43 score: 2.
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 5..381 score: 2.9