CSPI01G01360.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G01360.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Serine/threonine-protein kinase ATM
Location	Chr1 : 870164 .. 871892 (+)
Sequence length	684

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTGTACTTGGAGAAGGTGGAAGGAAGTTTAGTCGGGAAGAATGACAATCTTTATACTCCTAAAGAGGAGCTTTTCCGTTGCATCTTAACACTCCATTCACTTTTGGAAAATCCTCCTGGCGACTTCCCGGATAGTATTAGGCAGGAAATTGTGAATGGGATTGCTAAGATTTTCTCTCTTGTGAGGTATGATAATAATTGTTTTTAACCCAGTCTTCATTGTTCTGATTCTTGCTTGTCCCCTATGAATTTTTAACTTGATCTTTGCATTTTTGTTGGTCTTTTTTTAGTGAAAGAACGAATTATTTTTCTTTCTTTGTTAGGGATGAAGGAAAGGTATCACGCAAACTCATTGAGTGTGTAAATACATACTTGTTAAAGGATGGTCCTAATCTAGGAAGTAGCTTATTGGAGATCCATAATTCTGTGCAAACATTTGTATTTCGATGTTGGATGGTGACTCATGATCGAGCTCTTAAGGTATGAAATAAGTTGGACAGACTTAACTATTAGTTGATTTTAAAAGAATTATTGTTAGAACATTTTCCTGACTTGTTACTTTTGCAGGATGCTCTTGTCCTCTATGGAAGGTTACAAATAAGTTTAACGAGAGGAGCTGATGATGAGAGCATTTTGATAGAACAGCTCCTCGATGTACTTTATAAGGAACTAGATCAAAGCAGTATATTTAGTGTTGGGGTGCCTTGGTCTGTATTCCCTTACTCGCTTGATTTATCCCTTTTTGTTATATTTCATTTACGTTGAGTTTGTTTATCATCTGATAATGTATGGTAATTGGAACTATTTGAAGAATTTTCAGGTCTGATGCAAATAAAGATGATAAATTTGGAACTTTGAGTAGCTCACATTGCGGGTTGGTAGAACTTGCTGCAGCTGTGCTCTATCGGGTACTCCAAACATACTGTATTTTCTTATTTATTTACCACGCTTCATTGACAGGAAGTTGTTATTTTGATTTTTGACTCAATCACTTAATGTACAATTAGAAAGTATTCCTCTATCCATATATATGTATACGTATGTTCACACACACACACACAGATACGTACATACATATATATCCATTGATTAGTATTAAACTACCAATTCATCCAAAAGCTTAAGTTAGTGGTTGAAAGACAAATTTAATTATATATCACCAATACTCCCCCTTAAGTGGAAATCGATTTTAATTTGGGAGGAAACGACAATGCAGAGGCTTGACCACGGGACCTCCCTGAACCACTTGCTCTGATACCATATTAAACCACCAATTCATCCAAAAGCTTAAGCTAGTGGTTGGAAGGCAAATTTAATTATATATCACCAACAATTAGAAACAATAATATATCCAAAATAATTTGTTAAAAGTATTTAGTAAATTGTATCCACTACTCATCCATTAATCCTTTTAGATTTTCTTATATTCCACTTTAATGTTTCTCTTATCATGACCAATATCTTTTAATTTTAGTTAGAGTTATTGAGATCCTGTTGCTTTGTGGTACTTTTTATACTGCAGAATTCTTAGGATTATATTTAGTTGTTTGACTGGTTGTAGTTTATGGGCACTAGAAATGGGCCTGATTGTTTGCACACTGGTCTTATTTATTTAGGCATGTGTTACTTCTACAAAAGCAATATCAACTGAAAAGCGGGTTAAAAGAGACCCTGCTAGTGTTCATCTTAAAGAGGCACTTGGTGAAGGGAAATGGTTATGGTAA

mRNA sequence

ATGCTTCTGTACTTGGAGAAGGTGGAAGGAAGTTTAGTCGGGAAGAATGACAATCTTTATACTCCTAAAGAGGAGCTTTTCCGTTGCATCTTAACACTCCATTCACTTTTGGAAAATCCTCCTGGCGACTTCCCGGATAGTATTAGGCAGGAAATTGTGAATGGGATTGCTAAGATTTTCTCTCTTGTGAGGGATGAAGGAAAGGTATCACGCAAACTCATTGAGTGTGTAAATACATACTTGTTAAAGGATGGTCCTAATCTAGGAAGTAGCTTATTGGAGATCCATAATTCTGTGCAAACATTTGTATTTCGATGTTGGATGGTGACTCATGATCGAGCTCTTAAGGATGCTCTTGTCCTCTATGGAAGGTTACAAATAAGTTTAACGAGAGGAGCTGATGATGAGAGCATTTTGATAGAACAGCTCCTCGATGTACTTTATAAGGAACTAGATCAAAGCAGTATATTTAGTGTTGGGGTGCCTTGGTCTGATGCAAATAAAGATGATAAATTTGGAACTTTGAGTAGCTCACATTGCGGGTTGGTAGAACTTGCTGCAGCTGTGCTCTATCGGGCATGTGTTACTTCTACAAAAGCAATATCAACTGAAAAGCGGGTTAAAAGAGACCCTGCTAGTGTTCATCTTAAAGAGGCACTTGGTGAAGGGAAATGGTTATGGTAA

Coding sequence (CDS)

ATGCTTCTGTACTTGGAGAAGGTGGAAGGAAGTTTAGTCGGGAAGAATGACAATCTTTATACTCCTAAAGAGGAGCTTTTCCGTTGCATCTTAACACTCCATTCACTTTTGGAAAATCCTCCTGGCGACTTCCCGGATAGTATTAGGCAGGAAATTGTGAATGGGATTGCTAAGATTTTCTCTCTTGTGAGGGATGAAGGAAAGGTATCACGCAAACTCATTGAGTGTGTAAATACATACTTGTTAAAGGATGGTCCTAATCTAGGAAGTAGCTTATTGGAGATCCATAATTCTGTGCAAACATTTGTATTTCGATGTTGGATGGTGACTCATGATCGAGCTCTTAAGGATGCTCTTGTCCTCTATGGAAGGTTACAAATAAGTTTAACGAGAGGAGCTGATGATGAGAGCATTTTGATAGAACAGCTCCTCGATGTACTTTATAAGGAACTAGATCAAAGCAGTATATTTAGTGTTGGGGTGCCTTGGTCTGATGCAAATAAAGATGATAAATTTGGAACTTTGAGTAGCTCACATTGCGGGTTGGTAGAACTTGCTGCAGCTGTGCTCTATCGGGCATGTGTTACTTCTACAAAAGCAATATCAACTGAAAAGCGGGTTAAAAGAGACCCTGCTAGTGTTCATCTTAAAGAGGCACTTGGTGAAGGGAAATGGTTATGGTAA

Homology

[Close]

BLAST of CSPI01G01360.1 vs. Swiss-Prot
Match: ATM_ARATH (Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-73
Identity = 135/227 (59.47%), Postives = 167/227 (73.57%), Query Frame = 1


Query: 1    MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
            +LLY+E+ E     KN   ++ KEE FR ILTL SLLEN PGDFPD +R+EIVNG+  IF
Sbjct: 977  VLLYMERAETGFCEKNSGQHSQKEEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIF 1036

Query: 61   SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
            S VRDEGK+SRKLIECVNT+LLKDGPNLGS  LEIHN+V+ FVFRCW+ THD+ LK+ LV
Sbjct: 1037 SSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSLEIHNAVEQFVFRCWLTTHDKNLKEILV 1096

Query: 121  LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
             YGRLQ++LTR + + S L+EQLLDV+ +ELD  S  S    W D  KD+K G LSS   
Sbjct: 1097 SYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGS-SSSSASWGDTTKDEKLGALSSYQN 1156

Query: 181  GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
             LVELAA V YRACV +++   +EKR +R   ++ + +AL EGKWLW
Sbjct: 1157 SLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGKWLW 1202

[Close]

BLAST of CSPI01G01360.1 vs. TrEMBL
Match: A0A0A0LU98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004907 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.3e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF
Sbjct: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 227

[Close]

BLAST of CSPI01G01360.1 vs. TrEMBL
Match: W9RQB6_9ROSA (Serine/threonine-protein kinase ATM OS=Morus notabilis GN=L484_015021 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82
Identity = 150/227 (66.08%), Postives = 183/227 (80.62%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           +LLY+ KVE SL G+NDN Y P+EE+FRCILTL SLLENPPGDF +++R+ IV G   IF
Sbjct: 157 VLLYMGKVESSLDGRNDNSYNPREEVFRCILTLQSLLENPPGDFLNNLRENIVKGFVGIF 216

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           S VR E K+SRKLIEC+N YLLKDGPNLG   +EIH +VQ FVFRCW+ THDRALKDAL+
Sbjct: 217 SYVRFEDKLSRKLIECINKYLLKDGPNLGHHSMEIHGAVQQFVFRCWLTTHDRALKDALI 276

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LY RLQ++LTRGA D +IL+EQLLD++ KELDQS      +PW DA+KD+KFG LSSS  
Sbjct: 277 LYARLQLNLTRGATDGNILVEQLLDIVCKELDQSISSGGSLPWVDASKDEKFGALSSSQY 336

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLV+LAAAVLY+ACV + K  S+EKR+KR+ A+  L+EAL +GKWLW
Sbjct: 337 GLVDLAAAVLYQACVNTAKPPSSEKRMKREHAAARLREALMKGKWLW 383

[Close]

BLAST of CSPI01G01360.1 vs. TrEMBL
Match: U5FMP3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s08800g PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.0e-82
Identity = 151/226 (66.81%), Postives = 182/226 (80.53%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           +LLY+EKV  SL G + +   PKEE+FRCILTLHSL ENPPGDFP  +R++IV G+ +IF
Sbjct: 165 VLLYIEKVVTSLDGNDSSQGNPKEEVFRCILTLHSLFENPPGDFPVDVREDIVKGLVQIF 224

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           S VR+EGK+SRKLIEC+NTYLLKDGPNLGS  LEIHN+VQ FVFRCW+ THDR+LKDAL+
Sbjct: 225 SFVREEGKISRKLIECINTYLLKDGPNLGSQSLEIHNAVQQFVFRCWLTTHDRSLKDALI 284

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
            Y RLQ++L+RGA D + L+EQLLD++ KELDQSS      P SDA KD KFG LS S  
Sbjct: 285 FYARLQLNLSRGATDGNSLVEQLLDLVCKELDQSSSSCGSAPRSDATKDCKFGALSGSQR 344

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWL 227
           GL+ELAA V Y+AC ++ KA STEKRVKR+PA+V LKEAL +GKWL
Sbjct: 345 GLIELAALVFYKACASTAKAPSTEKRVKREPAAVLLKEALMKGKWL 390

[Close]

BLAST of CSPI01G01360.1 vs. TrEMBL
Match: A0A0D2QCX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G189100 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-81
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           M+ YLEKV  +L  KN+  Y+ KEE+FR IL LHSLLENP GDFPD +R++IV G  KIF
Sbjct: 164 MVFYLEKVATTLTEKNNTQYSQKEEIFRSILALHSLLENPAGDFPDHLREDIVKGFVKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           S +RDEGKVSRKLIEC+NTYLLKDGPNL    LEIHN+VQ FVFRCW++THD+ LKDALV
Sbjct: 224 SYIRDEGKVSRKLIECINTYLLKDGPNLSCQSLEIHNAVQQFVFRCWLMTHDKGLKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LY RLQ++L RG  + S+L+EQLLDV+ KELDQS+    G  W D  KDDKFGTLSSS  
Sbjct: 284 LYARLQLNLVRGVTEGSLLVEQLLDVISKELDQSNSSIPGTSWRDGTKDDKFGTLSSSQQ 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
            LVELAA VLYRAC T+++A S EKR KR+  +  LKE L +GKWLW
Sbjct: 344 HLVELAALVLYRACATTSRATSNEKRAKRESTAARLKEELVKGKWLW 390

[Close]

BLAST of CSPI01G01360.1 vs. TrEMBL
Match: A0A0D2T0L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G189100 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-81
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           M+ YLEKV  +L  KN+  Y+ KEE+FR IL LHSLLENP GDFPD +R++IV G  KIF
Sbjct: 164 MVFYLEKVATTLTEKNNTQYSQKEEIFRSILALHSLLENPAGDFPDHLREDIVKGFVKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           S +RDEGKVSRKLIEC+NTYLLKDGPNL    LEIHN+VQ FVFRCW++THD+ LKDALV
Sbjct: 224 SYIRDEGKVSRKLIECINTYLLKDGPNLSCQSLEIHNAVQQFVFRCWLMTHDKGLKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LY RLQ++L RG  + S+L+EQLLDV+ KELDQS+    G  W D  KDDKFGTLSSS  
Sbjct: 284 LYARLQLNLVRGVTEGSLLVEQLLDVISKELDQSNSSIPGTSWRDGTKDDKFGTLSSSQQ 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
            LVELAA VLYRAC T+++A S EKR KR+  +  LKE L +GKWLW
Sbjct: 344 HLVELAALVLYRACATTSRATSNEKRAKRESTAARLKEELVKGKWLW 390

[Close]

BLAST of CSPI01G01360.1 vs. TAIR10
Match: AT3G48190.1 (AT3G48190.1 ataxia-telangiectasia mutated)

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-74
Identity = 135/227 (59.47%), Postives = 167/227 (73.57%), Query Frame = 1


Query: 1    MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
            +LLY+E+ E     KN   ++ KEE FR ILTL SLLEN PGDFPD +R+EIVNG+  IF
Sbjct: 977  VLLYMERAETGFCEKNSGQHSQKEEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIF 1036

Query: 61   SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
            S VRDEGK+SRKLIECVNT+LLKDGPNLGS  LEIHN+V+ FVFRCW+ THD+ LK+ LV
Sbjct: 1037 SSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSLEIHNAVEQFVFRCWLTTHDKNLKEILV 1096

Query: 121  LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
             YGRLQ++LTR + + S L+EQLLDV+ +ELD  S  S    W D  KD+K G LSS   
Sbjct: 1097 SYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGS-SSSSASWGDTTKDEKLGALSSYQN 1156

Query: 181  GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
             LVELAA V YRACV +++   +EKR +R   ++ + +AL EGKWLW
Sbjct: 1157 SLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGKWLW 1202

[Close]

BLAST of CSPI01G01360.1 vs. NCBI nr
Match: gi|778655635|ref|XP_011656922.1| (PREDICTED: serine/threonine-protein kinase ATM isoform X2 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 3.3e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF
Sbjct: 164 MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 224 SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 284 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 344 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 390

[Close]

BLAST of CSPI01G01360.1 vs. NCBI nr
Match: gi|700208480|gb|KGN63576.1| (hypothetical protein Csa_1G004907 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 3.3e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF
Sbjct: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 227

[Close]

BLAST of CSPI01G01360.1 vs. NCBI nr
Match: gi|778655632|ref|XP_011656886.1| (PREDICTED: serine/threonine-protein kinase ATM isoform X1 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 3.3e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF
Sbjct: 164 MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 224 SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 284 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 344 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 390

[Close]

BLAST of CSPI01G01360.1 vs. NCBI nr
Match: gi|659105399|ref|XP_008453087.1| (PREDICTED: serine/threonine-protein kinase ATM isoform X2 [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGI KIF
Sbjct: 164 MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIVKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDG NLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 224 SLVRDEGKVSRKLIECVNTYLLKDGSNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDES+LIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 284 LYGRLQISLTRGADDESVLIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 344 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 390

[Close]

BLAST of CSPI01G01360.1 vs. NCBI nr
Match: gi|659105403|ref|XP_008453088.1| (PREDICTED: serine/threonine-protein kinase ATM isoform X3 [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 1


Query: 1   MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIAKIF 60
           MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGI KIF
Sbjct: 164 MLLYLEKVEGSLVGKNDNLYTPKEELFRCILTLHSLLENPPGDFPDSIRQEIVNGIVKIF 223

Query: 61  SLVRDEGKVSRKLIECVNTYLLKDGPNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 120
           SLVRDEGKVSRKLIECVNTYLLKDG NLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV
Sbjct: 224 SLVRDEGKVSRKLIECVNTYLLKDGSNLGSSLLEIHNSVQTFVFRCWMVTHDRALKDALV 283

Query: 121 LYGRLQISLTRGADDESILIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 180
           LYGRLQISLTRGADDES+LIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC
Sbjct: 284 LYGRLQISLTRGADDESVLIEQLLDVLYKELDQSSIFSVGVPWSDANKDDKFGTLSSSHC 343

Query: 181 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 228
           GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW
Sbjct: 344 GLVELAAAVLYRACVTSTKAISTEKRVKRDPASVHLKEALGEGKWLW 390

The following BLAST results are available for this feature:

BLAST of CSPI01G01360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATM_ARATH	5.6e-73	59.47	Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1	[more]

BLAST of CSPI01G01360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU98_CUCSA	2.3e-126	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004907 PE=4 SV=1	[more]
W9RQB6_9ROSA	2.1e-82	66.08	Serine/threonine-protein kinase ATM OS=Morus notabilis GN=L484_015021 PE=3 SV=1	[more]
U5FMP3_POPTR	6.0e-82	66.81	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s08800g PE=4 SV=1	[more]
A0A0D2QCX9_GOSRA	1.0e-81	65.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G189100 PE=3 SV=1	[more]
A0A0D2T0L7_GOSRA	1.0e-81	65.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G189100 PE=3 SV=1	[more]

BLAST of CSPI01G01360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48190.1	3.2e-74	59.47	ataxia-telangiectasia mutated	[more]

BLAST of CSPI01G01360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778655635\|ref\|XP_011656922.1\|	3.3e-126	100.00	PREDICTED: serine/threonine-protein kinase ATM isoform X2 [Cucumis sativus]	[more]
gi\|700208480\|gb\|KGN63576.1\|	3.3e-126	100.00	hypothetical protein Csa_1G004907 [Cucumis sativus]	[more]
gi\|778655632\|ref\|XP_011656886.1\|	3.3e-126	100.00	PREDICTED: serine/threonine-protein kinase ATM isoform X1 [Cucumis sativus]	[more]
gi\|659105399\|ref\|XP_008453087.1\|	1.1e-124	98.68	PREDICTED: serine/threonine-protein kinase ATM isoform X2 [Cucumis melo]	[more]
gi\|659105403\|ref\|XP_008453088.1\|	1.1e-124	98.68	PREDICTED: serine/threonine-protein kinase ATM isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G01360	CSPI01G01360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G01360.1	CSPI01G01360.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G01360.1.cds1	CSPI01G01360.1.cds1	CDS
CSPI01G01360.1.cds2	CSPI01G01360.1.cds2	CDS
CSPI01G01360.1.cds3	CSPI01G01360.1.cds3	CDS
CSPI01G01360.1.cds4	CSPI01G01360.1.cds4	CDS
CSPI01G01360.1.cds5	CSPI01G01360.1.cds5	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37079	FAMILY NOT NAMED	coord: 1..227 score: 8.3E
None	No IPR available	PANTHER	PTHR37079:SF2	SUBFAMILY NOT NAMED	coord: 1..227 score: 8.3E