CSPI01G01060.2 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G01060.2
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Dead box ATP-dependent RNA helicase, putative
Location	Chr1 : 622077 .. 625557 (+)
Sequence length	1536

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGAAGCCGACTACCGGTCAGGTATCGTCCGTTTTCAATTCCACCATTGAAGTAGTGTACTTCGTTTCTTCTACTTTCCAAATCCCATTACGTATACACAGTTATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGGTAATGTTTCTATTTTGAATTTATTTTTCTTTTTCTTGATTTCCCTATGGTGCTTATGATCTCTCTCCCTTTTTCTGGGTGTCTTTTGATCTTAAATCCCCAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGGTATTTTAAATATTCCATGAATTGAATGAGATTGTATTATGTTCCAGTGTTCAAGAAACTTGTTGATTGTTTCTTTATTTCCTTTGTTAGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATGTCAGTGTTGTATTACAGATTTTCAGCCTTATTTTCTTTTTGTTGCCACTCTTCTTTCGACCATTAACATTGTGATAATTTGTTCTCCATCTACATTCATCCAGCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTAATTGTGCTCAATGAAATGTTTTTTACTCTGTTTGTTGTTGGTTACTTGCAAGAATTTAGCAACTTCATTGTGTCTCTCAGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACGAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAGTATGATATTCCACCACCACTTCCTTCCCCTTTAAATTGATAGATAATGGAATTGCATGTGGAGACTTACAATTACTGTTATTTATGGCTCTAGTTGGGAGCGCTTGACAAACTTTACAGTTTTGTAAAGTTTTGGTGGTACTTGTGGAAAATTTCCCATTTATTATGATGCAGTGTTCAGTTCTCAAATTATTCTGAATGTGGAATTGAAAAACGTTCTCTTAAGAGCTCTTTAGAAGAAGATCCTATTTATTATCATGTAGTACTCGATTATCAATTCTGTCTAAGAGCATTTTTCTCTTTACAGATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTTATATTGAAAAAACCCCTTTGTGTCAATTATCACTCTGCTTCCATATCCCCTGTAGTTGTTAATGTTATAGAAACAGATAATGACAATTAAATGCTGTGATGTGATACATCAGGTCATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTTGTTAAAAGTTTGCGACATTCCACAAAATACGTGAACAACCAACCAGGGAGATTCTCTTCCTATTTTTACATTTATCATATTTTTCTCATGCAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGGTAGGATTACTACATGTCAGGTGTTTTAGGTTTTAATCTAGGCCCCGTTTGATAACAAATTGGTTTTTAGTTTTCTATTTTTGAACTTTATACTTGATTCCTCCAATTTTCTTGGTATCGTTTTCATCTTTCATAAAATACATACATTTGGATTCTTTGTAAACTTCCAAAAACAAAAACAAGATTTAAGAAACAAAAATTTCTTCAAAATTTGACTTGGTTTTTGGAAACATTGTTAGAAAATGGATAGCAAAATATTGAAACTTATAGATGGAAGTAGTGTTTAGAAGCTTACTTTTCAAGAACCAAAAACAAAATGTTTATCAAACGAGGCCTTGCGTGTTCATTTTCAAATTCTAATGAGTCGGCCAGCTGCTGTCCAGTTCCTGAATATAATTTGTGGCTTGGGTGCAGAGGAAAGTTCTATCGTGCAATGTGCAGCATGATGATTGTTAACGTGAGACTGCTTGGTTTCGTCTCCTATTTGAAACTGCATATGCTTTTGGTTTCTTTCTTTGGACTAATGAGATCCTTTTGATTCCCCGCACTGTGACATAGGTTTAGTTTCTTTTGGGCTTTTCTTTTTGCATCCTCTGGGGTAGTGGTGGTGTCTTATGGTGAAGGAAGAAGGTTTGGTTTAAAGGAAACAGACCCTACCCCCTTTTTTTACTGGCTGCAAGTACATTAGCAAGTCATGGCATGAATGTCATATGAACGCAAAGATGATGCTATTTTGAGGTTTTTCAATGATGTTCTTTTCCAGGTTAAAGGGGAGGGAAATCTTATTCTCTATGTATTCAAAGATTTGTAAATCCTCTGTATCAATGGGTCGGTAAAAGGATAACGAGGAAGCAGAGACTTTGATGTTACTTAAAAAGATCATTTCAT

mRNA sequence

ATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACGAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTCATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGGTTAA

Coding sequence (CDS)

ATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTTTAATACACATTAGTGCCCAGCCTCGTTTATCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACGAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTCATTATTGGTTCACCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGGTTAA

Homology

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BLAST of CSPI01G01060.2 vs. Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2)

HSP 1 Score: 652.5 bits (1682), Expect = 3.8e-186
Identity = 343/518 (66.22%), Postives = 393/518 (75.87%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           M+ YD R+ADPNSYR R    VG                +   P  APY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  PNA-------GGVNGLPRFQPPAGSFNIGRGGG-GGFGSSGGGRRTFDAERGGRRIGGSI 120
             +        G N  P FQPP+G F++GRGGG GG+G           + G R  GG+ 
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGGFSVGRGGGRGGYG-----------QYGDRNGGGNW 120

Query: 121 GFGGGRGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSV 180
           G GGGR                   GGSS+ +LD++ LP QNFGNLV FEKNFY E P+V
Sbjct: 121 GGGGGR-------------------GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTV 180

Query: 181 RAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGW 240
           +AMTE +V +YR  RDI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGW
Sbjct: 181 QAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGW 240

Query: 241 PMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQ 300
           PMALKGRDL+GIAETGSGKTLAYLLPAL+H+SAQPRL + +GPIVL+LAPTRELAVQIQ+
Sbjct: 241 PMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQE 300

Query: 301 EATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYL 360
           E+ KFGL + +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYL
Sbjct: 301 ESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYL 360

Query: 361 VLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSP 420
           VLDEADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS 
Sbjct: 361 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGST 420

Query: 421 DLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWP 480
           DLKANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWP
Sbjct: 421 DLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWP 474

Query: 481 ALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           AL+IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGL
Sbjct: 481 ALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474

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BLAST of CSPI01G01060.2 vs. Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 641.3 bits (1653), Expect = 8.7e-183
Identity = 341/510 (66.86%), Postives = 383/510 (75.10%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYD RYADP+SYRDRRSDL G    A    A        Y P P            A 
Sbjct: 96  MNPYDLRYADPSSYRDRRSDLAGAPVLAASAPAAANPYAAAYAPAP------------AA 155

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
           P A       RF         GRG GGG G  G GR                  GGG GG
Sbjct: 156 PVAPAGGDFSRFG--------GRGRGGGAGGGGWGR------------------GGGGGG 215

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           G G    GGGRGGGR         LD++ LP  +F +L+PFEKNFY ECP+V+AM++ +V
Sbjct: 216 GAGGYRGGGGRGGGRDA-------LDSLSLPKPDFRSLIPFEKNFYVECPAVQAMSDMDV 275

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
             YR +RDI VEG+DVP+P+R FQEANFP YC+  IAK GFVEPTPIQ+QGWPMALKGRD
Sbjct: 276 SQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRD 335

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           ++GIA+TGSGKTL+YLLP L+H+ AQPRL +G+GPIVL+LAPTRELAVQIQQE+ KFG +
Sbjct: 336 MIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSY 395

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           +  RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE GHTNLRRVTYLVLDEADRM
Sbjct: 396 SRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRM 455

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIR IV+QIRPDRQTLYWSATWPREVE LARQFL+N YKVIIGSPDLKAN SI
Sbjct: 456 LDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSI 515

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
            Q++EV+ E EKY RL KLL ++MDGSRILIF +TKK CDKVTRQLRMDGWPALSIHGDK
Sbjct: 516 QQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDK 560

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
            QAERD VL+EFKSG++PIM ATDVAARGL
Sbjct: 576 AQAERDYVLAEFKSGKSPIMAATDVAARGL 560

[Close]

BLAST of CSPI01G01060.2 vs. Swiss-Prot
Match: RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 560.1 bits (1442), Expect = 2.6e-158
Identity = 276/383 (72.06%), Postives = 322/383 (84.07%), Query Frame = 1


Query: 128 GGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERR 187
           G   GG R    +S+ D       + +   L  FEKNFY E PSV  MTE EV+ YR RR
Sbjct: 21  GAFGGGTRAFAPTSKADS---AAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRR 80

Query: 188 DIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAET 247
           +I VEG DVP+P+R F++  FP Y L  I K GFVEPTPIQ+QGWPMAL+GRDL+GIAET
Sbjct: 81  EITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAET 140

Query: 248 GSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTC 307
           GSGKTLAYLLPA++H++AQP L+ G+GPIVLVLAPTRELAVQIQQEATKFG  + I+STC
Sbjct: 141 GSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTC 200

Query: 308 VYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEP 367
           +YGG PKGPQ+RDL+ GVEIVIATPGRLIDM+E+ HTNLRRVTYLVLDEADRMLDMGFEP
Sbjct: 201 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEP 260

Query: 368 QIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVL 427
           QI+ IVSQIRPDRQTLYWSATWP+EVE+LAR FL + YKVIIGS +LKAN +I+Q VE+L
Sbjct: 261 QIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEIL 320

Query: 428 PEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDL 487
            E++KY +L+ LL ++MDGSRILIF++TKKGCD++TRQLRMDGWPALSIHGDK QAERD 
Sbjct: 321 SESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 380

Query: 488 VLSEFKSGRNPIMTATDVAARGL 511
           VLSEFKSG++PIMTATDVAARGL
Sbjct: 381 VLSEFKSGKSPIMTATDVAARGL 400

[Close]

BLAST of CSPI01G01060.2 vs. Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=2 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.8e-156
Identity = 270/394 (68.53%), Postives = 333/394 (84.52%), Query Frame = 1


Query: 118 RGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQ-NFGNLVPFEKNFYTECPSVRAMT 177
           R   +GF G      G  G   SS+ D D    P + +   L PFEKNFY E P+V AMT
Sbjct: 17  RRSDSGFGGTSSY--GSSGSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMT 76

Query: 178 ESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAL 237
           ++EV+ YR+ R+I VEG D+P+P++SF++  FP Y L+ + K GF EPTPIQ+QGWPMA+
Sbjct: 77  DTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAM 136

Query: 238 KGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATK 297
           KGRDL+GIAETGSGKTL+YLLPA++H++AQP L+ G+GPIVLVLAPTRELAVQIQQEA+K
Sbjct: 137 KGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASK 196

Query: 298 FGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDE 357
           FG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM+E+ +TNLRRVTYLVLDE
Sbjct: 197 FGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDE 256

Query: 358 ADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKA 417
           ADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L+++FL N YKVIIGS DLKA
Sbjct: 257 ADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKA 316

Query: 418 NQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSI 477
           N++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKKGCD++TRQLRMDGWPALSI
Sbjct: 317 NRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSI 376

Query: 478 HGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           HGDK QAERD VLSEF+SG++PIMTATDVAARGL
Sbjct: 377 HGDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 408

[Close]

BLAST of CSPI01G01060.2 vs. Swiss-Prot
Match: DBP2_LODEL (ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.5e-137
Identity = 260/426 (61.03%), Postives = 315/426 (73.94%), Query Frame = 1


Query: 87  GGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGGGTGFDGRGGGRGGGRGGGGSSRGDLD 146
           GG+G + GG        GGR  GG+ G+GGGRGGG G  GR GG GG RGGGG  +    
Sbjct: 5   GGYGQNNGGYGGGQGGYGGR--GGAGGYGGGRGGGYGGGGRSGGYGG-RGGGGRFQDTRV 64

Query: 147 NIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEA 206
            +  P  +  +L  FEKNFY E P+V A T+ E++ +R+  ++ + G+D+P PI SF EA
Sbjct: 65  ELTTPEWDLESLPKFEKNFYNEHPNVTARTDREIEQFRKENEMSILGHDIPHPITSFDEA 124

Query: 207 NFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPALIHISAQ 266
            FP Y L+ +   GF +PT IQ QGWPMAL GRD+VGIA TGSGKTL+Y LP ++HI+AQ
Sbjct: 125 GFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQ 184

Query: 267 PRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVE 326
           P L RG+GPIVLVLAPTRELA QIQ E +KFG  + IR+TCVYGGAPKGPQIRDL NGVE
Sbjct: 185 PLLKRGDGPIVLVLAPTRELACQIQTECSKFGASSRIRNTCVYGGAPKGPQIRDLANGVE 244

Query: 327 IVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWS 386
           I IATPGRLIDMLEAG TNL+RVTYLVLDEADRMLDMGFEPQIR IV QIRPDRQTL WS
Sbjct: 245 ICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 304

Query: 387 ATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVM-- 446
           ATWP+EV+ LAR +L N  +V IGS +L A+ +I Q+V+V+ E +K   L+K L   +  
Sbjct: 305 ATWPKEVQNLARDYLDNPIQVTIGSLELAASHTITQIVQVVTEYQKRDLLVKHLESALAD 364

Query: 447 DGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATD 506
             S++L+F  TK+ CD+VT  LR DGWPAL+IHGDK+Q ERD VL EF+ G + IM ATD
Sbjct: 365 SNSKVLVFASTKRTCDEVTSYLRADGWPALAIHGDKEQHERDWVLKEFRQGSHSIMVATD 424

Query: 507 VAARGL 511
           VAARG+
Sbjct: 425 VAARGI 427

[Close]

BLAST of CSPI01G01060.2 vs. TrEMBL
Match: A0A0A0LRZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004080 PE=3 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 7.4e-290
Identity = 509/510 (99.80%), Postives = 510/510 (100.00%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
           PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG
Sbjct: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPA+IHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CSPI01G01060.2 vs. TrEMBL
Match: W9RRE4_9ROSA (DEAD-box ATP-dependent RNA helicase 20 OS=Morus notabilis GN=L484_014542 PE=3 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 2.1e-212
Identity = 406/522 (77.78%), Postives = 438/522 (83.91%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHR ADP+SYRDRRSDLVG  PA  P I GR + Y G    PA Y G   G   A+
Sbjct: 1   MNPYDHRLADPSSYRDRRSDLVG--PAPAPGIGGRGTGY-GRGSVPASYGGPVHG---AV 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGG---GFGSSGGGR-RTFDAER--GGRRIGGSI-- 120
           PN G +NG P FQPP G F+IGRGGGG   G G  G GR R FD  R  GG R GG+   
Sbjct: 61  PNVGNLNGFPPFQPPVGRFDIGRGGGGDRRGRGGGGEGRGRGFDLGRGGGGGRFGGNRSF 120

Query: 121 --GFGGGRGGGTGFDGRGGGRGGGRGG--GGSSRGDLDNIVLPSQNFGNLVPFEKNFYTE 180
             GFGGGRGGG GFDGRGG  GGGRGG  G  SRGDLDN+ LP Q+FGNLVPFEKNFY E
Sbjct: 121 DGGFGGGRGGGRGFDGRGG--GGGRGGRHGPPSRGDLDNVALPRQDFGNLVPFEKNFYVE 180

Query: 181 CPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQ 240
            PSVRAMTE EV  YR RR+I VEG DVP+PIR F+EANFP YCLDVIAKLGFVEPTPIQ
Sbjct: 181 SPSVRAMTEHEVVQYRVRREITVEGQDVPKPIRRFEEANFPGYCLDVIAKLGFVEPTPIQ 240

Query: 241 AQGWPMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAV 300
           AQGWPMALKGRDL+GIAETGSGKTLAYLLPAL+H+SAQP+L++GEGPIVLVLAPTRELAV
Sbjct: 241 AQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPQLAQGEGPIVLVLAPTRELAV 300

Query: 301 QIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRR 360
           QI QEA KFG+ A+IRSTC+YGGAPKGPQIRDLK GVEIVIATPGRLIDMLEA HTNLRR
Sbjct: 301 QI-QEAVKFGVRASIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRR 360

Query: 361 VTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVI 420
           VTYLVLDEADRMLDMGFEPQIR I+SQIRPDRQTLYWSATWPREVE LARQFLRN YKV+
Sbjct: 361 VTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVEALARQFLRNPYKVV 420

Query: 421 IGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRM 480
           IGSP+LKANQSINQVVEV+ + EKY RLIKLL E++D  +ILIF+ETKK CD+VTRQLRM
Sbjct: 421 IGSPNLKANQSINQVVEVVTDMEKYNRLIKLLKEMVDSGKILIFIETKKACDQVTRQLRM 480

Query: 481 DGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           DGWPALSIHGDK QAERD VL+EFKSGR+PIMTATDVAARGL
Sbjct: 481 DGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 513

[Close]

BLAST of CSPI01G01060.2 vs. TrEMBL
Match: B9RGR4_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1442990 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 5.5e-208
Identity = 398/542 (73.43%), Postives = 430/542 (79.34%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQP-AAPPPIAGRESLYKGYQP------PPAPYYGRE 60
           MNPYDHRY+DP+SYR RRSDL G  P A PPP+ GR     G+ P      PP  + GR 
Sbjct: 1   MNPYDHRYSDPDSYRHRRSDLTGASPPAGPPPMLGRSYGRSGHPPVPYGGPPPLNFAGR- 60

Query: 61  RGGGGALPNAGGVNGLPRFQPPAGSFNIGRGGG--GGFGSSGGGRRT------------- 120
             GGG  P    V G P F+PP G F+IG GGG  G  G    GRR              
Sbjct: 61  --GGGPAP----VGGYPPFEPPVGRFDIGYGGGDAGSVGRGFSGRRVPNGHFGDSRPDAS 120

Query: 121 -------FDAERGGRRIGGSIGFGGGRGGGTGFDG-RGG-GRGGGRGGGGSSRGDLDNIV 180
                   D  RGGR  GG    GGGR GG GFDG RGG GRGG  G GG SRGDLDNI 
Sbjct: 121 IRGRGSRGDGGRGGRSGGGRGFGGGGRSGGRGFDGGRGGRGRGGRHGSGGGSRGDLDNIA 180

Query: 181 LPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFP 240
           LP Q+FGNLVPFEKNFY E PSV+AM+E EV +YR RRDI VEG+DVP+PIR FQEANFP
Sbjct: 181 LPKQDFGNLVPFEKNFYIENPSVQAMSEHEVIMYRARRDITVEGHDVPKPIRIFQEANFP 240

Query: 241 AYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRL 300
            YCL+VIAKLGFVEPTPIQAQGWPMALKGRD++GIAETGSGKTLAY+LPAL+H+SAQPRL
Sbjct: 241 GYCLEVIAKLGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYVLPALVHVSAQPRL 300

Query: 301 SRGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVI 360
            +GEGP+VL+LAPTRELAVQIQ+EA KFG  ANIR+TC+YGGAPKGPQIRDL  GVEIVI
Sbjct: 301 VQGEGPVVLILAPTRELAVQIQEEALKFGSRANIRTTCIYGGAPKGPQIRDLHRGVEIVI 360

Query: 361 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATW 420
           ATPGRLIDMLEA HTNLRRVTYLVLDEADRMLDMGFEPQIR +VSQIRPDRQTLYWSATW
Sbjct: 361 ATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLYWSATW 420

Query: 421 PREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRI 480
           PREVE LARQFLRN YKV+IGS DLKANQSINQVVE++ E EKY RLIKLL EVMDGSRI
Sbjct: 421 PREVETLARQFLRNPYKVVIGSTDLKANQSINQVVEIVSEMEKYNRLIKLLKEVMDGSRI 480

Query: 481 LIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARG 512
           LIF+ETKKGCD+VTRQLRMDGWP LSIHGDK Q ERD VLSEFKSGR+PIMTATDVAARG
Sbjct: 481 LIFMETKKGCDQVTRQLRMDGWPVLSIHGDKNQTERDWVLSEFKSGRSPIMTATDVAARG 535

[Close]

BLAST of CSPI01G01060.2 vs. TrEMBL
Match: V4TII1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019394mg PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 8.7e-206
Identity = 394/515 (76.50%), Postives = 421/515 (81.75%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGR--ESLYKGYQPPPAPYYGRERGGGG 60
           MN YDHRYADP+SYR RRSDLVG     PPPI G    + Y G  PPPA Y GR   G G
Sbjct: 1   MNRYDHRYADPDSYRQRRSDLVG----PPPPIMGPGGPAPYGGPPPPPASYPGR---GLG 60

Query: 61  ALPNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGR 120
           A P A          PP G F+ GRGGGG      GGR       GG R GG        
Sbjct: 61  AAPGA---------YPPVGRFDGGRGGGGAIRF--GGRGISKGHSGGDRRGG-------- 120

Query: 121 GGGTGFD-GRGGGRGGGRGGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMT 180
            GG GFD GRGGGRGGGRGG  G  R DLDN+ LP Q+FGNLVPFEKNFY E PS+RAMT
Sbjct: 121 -GGRGFDSGRGGGRGGGRGGRHGGHRDDLDNLSLPKQDFGNLVPFEKNFYVESPSIRAMT 180

Query: 181 ESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAL 240
           E+EVK+YR RR+I VEG+DVPRPIR FQEANFP YCL+VIAKLGFVEPTPIQAQGWPMAL
Sbjct: 181 ETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMAL 240

Query: 241 KGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATK 300
           KGRDL+GIAETGSGKTL+YLLPA +H+SAQPRL +GEGPIVLVLAPTRELAVQIQ+EA K
Sbjct: 241 KGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALK 300

Query: 301 FGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDE 360
           FG  A IRSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLEA HTNLRRVTYLVLDE
Sbjct: 301 FGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDE 360

Query: 361 ADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKA 420
           ADRMLDMGFEPQIR IV+QIRPDRQTLYWSATWPREVE LARQFLRN YKVIIGS +LKA
Sbjct: 361 ADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKA 420

Query: 421 NQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSI 480
           NQSINQVVEV+ EAEKY RLIKLL EVMDGSRILIF ETKKGCD+VTRQLRMDGWPALSI
Sbjct: 421 NQSINQVVEVVTEAEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSI 480

Query: 481 HGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLG 512
           HGDK Q+ERD VL+EF+SGR+PIMTATDVAARGLG
Sbjct: 481 HGDKNQSERDWVLAEFRSGRSPIMTATDVAARGLG 488

[Close]

BLAST of CSPI01G01060.2 vs. TrEMBL
Match: V4VKD5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019394mg PE=3 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 4.3e-205
Identity = 393/514 (76.46%), Postives = 420/514 (81.71%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGR--ESLYKGYQPPPAPYYGRERGGGG 60
           MN YDHRYADP+SYR RRSDLVG     PPPI G    + Y G  PPPA Y GR   G G
Sbjct: 1   MNRYDHRYADPDSYRQRRSDLVG----PPPPIMGPGGPAPYGGPPPPPASYPGR---GLG 60

Query: 61  ALPNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGR 120
           A P A          PP G F+ GRGGGG      GGR       GG R GG        
Sbjct: 61  AAPGA---------YPPVGRFDGGRGGGGAIRF--GGRGISKGHSGGDRRGG-------- 120

Query: 121 GGGTGFD-GRGGGRGGGRGGG-GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMT 180
            GG GFD GRGGGRGGGRGG  G  R DLDN+ LP Q+FGNLVPFEKNFY E PS+RAMT
Sbjct: 121 -GGRGFDSGRGGGRGGGRGGRHGGHRDDLDNLSLPKQDFGNLVPFEKNFYVESPSIRAMT 180

Query: 181 ESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAL 240
           E+EVK+YR RR+I VEG+DVPRPIR FQEANFP YCL+VIAKLGFVEPTPIQAQGWPMAL
Sbjct: 181 ETEVKMYRARREITVEGHDVPRPIRIFQEANFPDYCLEVIAKLGFVEPTPIQAQGWPMAL 240

Query: 241 KGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATK 300
           KGRDL+GIAETGSGKTL+YLLPA +H+SAQPRL +GEGPIVLVLAPTRELAVQIQ+EA K
Sbjct: 241 KGRDLIGIAETGSGKTLSYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALK 300

Query: 301 FGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDE 360
           FG  A IRSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLEA HTNLRRVTYLVLDE
Sbjct: 301 FGSRAGIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDE 360

Query: 361 ADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKA 420
           ADRMLDMGFEPQIR IV+QIRPDRQTLYWSATWPREVE LARQFLRN YKVIIGS +LKA
Sbjct: 361 ADRMLDMGFEPQIRKIVTQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSLELKA 420

Query: 421 NQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSI 480
           NQSINQVVEV+ EAEKY RLIKLL EVMDGSRILIF ETKKGCD+VTRQLRMDGWPALSI
Sbjct: 421 NQSINQVVEVVTEAEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSI 480

Query: 481 HGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           HGDK Q+ERD VL+EF+SGR+PIMTATDVAARGL
Sbjct: 481 HGDKNQSERDWVLAEFRSGRSPIMTATDVAARGL 487

[Close]

BLAST of CSPI01G01060.2 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 652.5 bits (1682), Expect = 2.1e-187
Identity = 343/518 (66.22%), Postives = 393/518 (75.87%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           M+ YD R+ADPNSYR R    VG                +   P  APY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  PNA-------GGVNGLPRFQPPAGSFNIGRGGG-GGFGSSGGGRRTFDAERGGRRIGGSI 120
             +        G N  P FQPP+G F++GRGGG GG+G           + G R  GG+ 
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGGFSVGRGGGRGGYG-----------QYGDRNGGGNW 120

Query: 121 GFGGGRGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSV 180
           G GGGR                   GGSS+ +LD++ LP QNFGNLV FEKNFY E P+V
Sbjct: 121 GGGGGR-------------------GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTV 180

Query: 181 RAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGW 240
           +AMTE +V +YR  RDI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGW
Sbjct: 181 QAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGW 240

Query: 241 PMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQ 300
           PMALKGRDL+GIAETGSGKTLAYLLPAL+H+SAQPRL + +GPIVL+LAPTRELAVQIQ+
Sbjct: 241 PMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQE 300

Query: 301 EATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYL 360
           E+ KFGL + +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYL
Sbjct: 301 ESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYL 360

Query: 361 VLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSP 420
           VLDEADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS 
Sbjct: 361 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGST 420

Query: 421 DLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWP 480
           DLKANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWP
Sbjct: 421 DLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWP 474

Query: 481 ALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           AL+IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGL
Sbjct: 481 ALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474

[Close]

BLAST of CSPI01G01060.2 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 553.9 bits (1426), Expect = 1.0e-157
Identity = 270/394 (68.53%), Postives = 333/394 (84.52%), Query Frame = 1


Query: 118 RGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQ-NFGNLVPFEKNFYTECPSVRAMT 177
           R   +GF G      G  G   SS+ D D    P + +   L PFEKNFY E P+V AMT
Sbjct: 17  RRSDSGFGGTSSY--GSSGSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMT 76

Query: 178 ESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAL 237
           ++EV+ YR+ R+I VEG D+P+P++SF++  FP Y L+ + K GF EPTPIQ+QGWPMA+
Sbjct: 77  DTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAM 136

Query: 238 KGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATK 297
           KGRDL+GIAETGSGKTL+YLLPA++H++AQP L+ G+GPIVLVLAPTRELAVQIQQEA+K
Sbjct: 137 KGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASK 196

Query: 298 FGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDE 357
           FG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM+E+ +TNLRRVTYLVLDE
Sbjct: 197 FGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDE 256

Query: 358 ADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKA 417
           ADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L+++FL N YKVIIGS DLKA
Sbjct: 257 ADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKA 316

Query: 418 NQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSI 477
           N++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKKGCD++TRQLRMDGWPALSI
Sbjct: 317 NRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSI 376

Query: 478 HGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           HGDK QAERD VLSEF+SG++PIMTATDVAARGL
Sbjct: 377 HGDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 408

[Close]

BLAST of CSPI01G01060.2 vs. TAIR10
Match: AT2G47330.1 (AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-95
Identity = 176/352 (50.00%), Postives = 237/352 (67.33%), Query Frame = 1


Query: 160 PFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKL 219
           P  K+FY E  S+  MTE E   YR+R  IRV G+DV RP+++F++  F +  +  I K 
Sbjct: 187 PINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQ 246

Query: 220 GFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLV 279
            + +PT IQ Q  P+ L GRD++GIA+TGSGKT A++LP ++HI  QP L R EGPI ++
Sbjct: 247 AYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVI 306

Query: 280 LAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDML 339
            APTRELA QI  EA KF     +R + VYGG  K  Q ++LK G EIV+ATPGRLIDML
Sbjct: 307 CAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDML 366

Query: 340 EAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQ 399
           +     + R +YLVLDEADRM D+GFEPQ+R+IV QIRPDRQTL +SAT P +VEKLAR+
Sbjct: 367 KMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLARE 426

Query: 400 FLRNAYKVIIGSPDLKANQSINQVVEVLP-EAEKYRRLIKLLGEVMDGSRILIFVETKKG 459
            L +  +V +G   + AN+ I QVV V+P +AEK   L++ L  ++D   +L+F   K  
Sbjct: 427 ILSDPIRVTVGEVGM-ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKAT 486

Query: 460 CDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
            D++  QL ++ +   ++HGDK QA R   L +FKSG + ++ ATDVAARGL
Sbjct: 487 VDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGL 537

[Close]

BLAST of CSPI01G01060.2 vs. TAIR10
Match: AT1G20920.1 (AT1G20920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 345.1 bits (884), Expect = 7.3e-95
Identity = 169/354 (47.74%), Postives = 237/354 (66.95%), Query Frame = 1


Query: 160 PFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKL 219
           PF KNFY E   +  MT+ EV  YR+  +++V G DVPRPI+ + +    +  LD + KL
Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547

Query: 220 GFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLV 279
            + +P PIQ Q  P+ + GRD +G+A+TGSGKTL ++LP L HI  QP +  G+GPI LV
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607

Query: 280 LAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDML 339
           +APTREL  QI  +  KF     IR   VYGG+    QI +LK G EIV+ TPGR+ID+L
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667

Query: 340 ---EAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKL 399
                  TNLRRVT+LV+DEADRM DMGFEPQI  I+  IRP+RQT+ +SAT+PR+VE L
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727

Query: 400 ARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETK 459
           AR+ L    ++ +G   +  N+ I Q+VEV PE++++ RL++LLGE  +  +IL+FV+++
Sbjct: 728 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQ 787

Query: 460 KGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           + CD + R +    +P LS+HG K Q +R+  +S+FK+    ++ AT VAARGL
Sbjct: 788 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGL 840

[Close]

BLAST of CSPI01G01060.2 vs. TAIR10
Match: AT3G01540.2 (AT3G01540.2 DEAD box RNA helicase 1)

HSP 1 Score: 344.7 bits (883), Expect = 9.5e-95
Identity = 197/396 (49.75%), Postives = 252/396 (63.64%), Query Frame = 1


Query: 116 GGRGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAM 175
           GGR G    +G   G G    G  S+R  L                        PS    
Sbjct: 97  GGRSGPPYSNGAANGVGDSAYGAASTRVPL------------------------PSSAPA 156

Query: 176 TESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA 235
           +E   + Y  R +I V G  VP P+ SF+   FP   L  +   GF  PTPIQAQ WP+A
Sbjct: 157 SELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIA 216

Query: 236 LKGRDLVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEAT 295
           ++GRD+V IA+TGSGKTL YL+P  +H+      SR  GP +LVL+PTRELA QIQ+EA 
Sbjct: 217 MQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSR-MGPTILVLSPTRELATQIQEEAV 276

Query: 296 KFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 355
           KFG  + I  TC+YGGAPKGPQ+RDL+ G +IV+ATPGRL D+LE    +LR+++YLVLD
Sbjct: 277 KFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLD 336

Query: 356 EADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPD-L 415
           EADRMLDMGFEPQIR IV +I   RQTL ++ATWP+ V K+A   L N  +V IG+ D L
Sbjct: 337 EADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDEL 396

Query: 416 KANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPAL 475
            AN+SI Q +EV+   EK RRL ++L     GS+++IF  TK+ CD++TR L    + A 
Sbjct: 397 VANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAA 456

Query: 476 SIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           +IHGDK Q ERD VL++F+SGR P++ ATDVAARGL
Sbjct: 457 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGL 466

[Close]

BLAST of CSPI01G01060.2 vs. NCBI nr
Match: gi|449440640|ref|XP_004138092.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus])

HSP 1 Score: 1003.8 bits (2594), Expect = 1.1e-289
Identity = 509/510 (99.80%), Postives = 510/510 (100.00%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
           PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG
Sbjct: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPA+IHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CSPI01G01060.2 vs. NCBI nr
Match: gi|778655490|ref|XP_011654700.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 30 isoform X2 [Cucumis sativus])

HSP 1 Score: 1003.8 bits (2594), Expect = 1.1e-289
Identity = 509/510 (99.80%), Postives = 510/510 (100.00%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
           PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG
Sbjct: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPA+IHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CSPI01G01060.2 vs. NCBI nr
Match: gi|700208446|gb|KGN63542.1| (hypothetical protein Csa_1G004080 [Cucumis sativus])

HSP 1 Score: 1003.8 bits (2594), Expect = 1.1e-289
Identity = 509/510 (99.80%), Postives = 510/510 (100.00%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
           PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG
Sbjct: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPA+IHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CSPI01G01060.2 vs. NCBI nr
Match: gi|659129075|ref|XP_008464517.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo])

HSP 1 Score: 974.2 bits (2517), Expect = 9.1e-281
Identity = 495/510 (97.06%), Postives = 499/510 (97.84%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
            NAGGVNGLPRFQPPAG FNIGRGGGGGF SSGGGRR FD+ERGGRR GG+IGFGGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPALIHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CSPI01G01060.2 vs. NCBI nr
Match: gi|659129077|ref|XP_008464518.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 30 isoform X2 [Cucumis melo])

HSP 1 Score: 974.2 bits (2517), Expect = 9.1e-281
Identity = 495/510 (97.06%), Postives = 499/510 (97.84%), Query Frame = 1


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGG 120
            NAGGVNGLPRFQPPAG FNIGRGGGGGF SSGGGRR FD+ERGGRR GG+IGFGGGRGG
Sbjct: 61  ANAGGVNGLPRFQPPAGPFNIGRGGGGGFSSSGGGRRMFDSERGGRRTGGNIGFGGGRGG 120

Query: 121 GTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           GTGFDGRGGGRGGGRGG GSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 GTGFDGRGGGRGGGRGGAGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPALIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPALIHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

The following BLAST results are available for this feature:

BLAST of CSPI01G01060.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH30_ARATH	3.8e-186	66.22	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2	[more]
RH30_ORYSJ	8.7e-183	66.86	DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0...	[more]
RH20_ORYSJ	2.6e-158	72.06	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0...	[more]
RH20_ARATH	1.8e-156	68.53	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=2 SV=1	[more]
DBP2_LODEL	1.5e-137	61.03	ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus (strain ATCC 11503 ...	[more]

BLAST of CSPI01G01060.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRZ9_CUCSA	7.4e-290	99.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004080 PE=3 SV=1	[more]
W9RRE4_9ROSA	2.1e-212	77.78	DEAD-box ATP-dependent RNA helicase 20 OS=Morus notabilis GN=L484_014542 PE=3 SV...	[more]
B9RGR4_RICCO	5.5e-208	73.43	Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_144299...	[more]
V4TII1_9ROSI	8.7e-206	76.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019394mg PE=3 SV=1	[more]
V4VKD5_9ROSI	4.3e-205	76.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019394mg PE=3 SV=1	[more]

BLAST of CSPI01G01060.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63120.2	2.1e-187	66.22	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT1G55150.1	1.0e-157	68.53	DEA(D/H)-box RNA helicase family protein	[more]
AT2G47330.1	1.9e-95	50.00	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT1G20920.1	7.3e-95	47.74	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G01540.2	9.5e-95	49.75	DEAD box RNA helicase 1	[more]

BLAST of CSPI01G01060.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440640\|ref\|XP_004138092.1\|	1.1e-289	99.80	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus]	[more]
gi\|778655490\|ref\|XP_011654700.1\|	1.1e-289	99.80	PREDICTED: DEAD-box ATP-dependent RNA helicase 30 isoform X2 [Cucumis sativus]	[more]
gi\|700208446\|gb\|KGN63542.1\|	1.1e-289	99.80	hypothetical protein Csa_1G004080 [Cucumis sativus]	[more]
gi\|659129075\|ref\|XP_008464517.1\|	9.1e-281	97.06	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo]	[more]
gi\|659129077\|ref\|XP_008464518.1\|	9.1e-281	97.06	PREDICTED: DEAD-box ATP-dependent RNA helicase 30 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000629	RNA-helicase_DEAD-box_CS
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G01060	CSPI01G01060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G01060.2	CSPI01G01060.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G01060.2.utr5p1	CSPI01G01060.2.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G01060.2.cds1	CSPI01G01060.2.cds1	CDS
CSPI01G01060.2.cds2	CSPI01G01060.2.cds2	CDS
CSPI01G01060.2.cds3	CSPI01G01060.2.cds3	CDS
CSPI01G01060.2.cds4	CSPI01G01060.2.cds4	CDS
CSPI01G01060.2.cds5	CSPI01G01060.2.cds5	CDS
CSPI01G01060.2.cds6	CSPI01G01060.2.cds6	CDS
CSPI01G01060.2.cds7	CSPI01G01060.2.cds7	CDS
CSPI01G01060.2.cds8	CSPI01G01060.2.cds8	CDS
CSPI01G01060.2.cds9	CSPI01G01060.2.cds9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G01060.2.utr3p1	CSPI01G01060.2.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 353..361 scor
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 431..510 score: 8.5
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 435..511 score: 11
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 225..396 score: 2.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 220..423 score: 2.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 232..407 score:
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 201..229 score: 10
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 413..510 score: 3.4E-24coord: 184..412 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 186..409 score: 1.51E-75coord: 418..510 score: 6.28
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 102..510 score: 4.6E
None	No IPR available	PANTHER	PTHR24031:SF269	DEAD-BOX ATP-DEPENDENT RNA HELICASE 30	coord: 102..510 score: 4.6E