BhiUN66M22 (mRNA) Wax gourd

NameBhiUN66M22
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
LocationContig66 : 618857 .. 619701 (+)
Sequence length423
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAAGGAATAGTCCGGTGTTAAGTATTTTGTCTCTTTGTATTTTCAGTGTGGTTGACACAAGAAGTCGATCACAAAATACCTGTCAGTCTGGGGTACACCCTCAAAAATCTGTAAAACGTCCTCGCAAAGCCAAGCCTGTTACTTCCTCTTCCAAACAGCATCATTCAAGTTCGTCCACTCCTGAGGTTGTGCATCCTCATAAGGTACTATATCTGCTATTGACACTGAAAATATTGTGCATGCATATGGTTTGGTTGACTCTGTCTATATTGGTCCTCTCGCTATTGTTCCCTATGTTGGTGGAGATGATAACTTGTTCTCTGTTGTTTTCTCTCTTCTTCATATTTTGTCTAATCATCATAATTCTATTGTCTTTCCTGGTATTTCTTCTTCCACTACCACTGAACTTTATGTAAATGACCCAGCGAATATTGTTATGTCTGGTAAAGTTGAAGAAAATGTTATTCTAGATACTGTTGAGGGTTCTGATGTGTTGATCTTTGAGCCTCCTCCTGCCTCTCTAATGCATGCTTAGGCTACTACTAATGAAAATGTTGAACATAATACGACTGCTTCTGATCCTATCATTGATGATTCCCTTATCGATGAAGCTTCTATCCCTCAAAACCCTAATACCGATGTTGGTAAACCAGTGTTTGACAAAGACATTGCATCAGACTCTTCAGATGACCATGTTGTGATTGCAAAACTAGGTAAGCATAGAATTAAAAAAAGGGTCAAAACGTCTTAGACTTCTAGTCCTTTTTCCAGAACACGCTCTCGTTTACCTTCATCCTCTAAGAATTCATCTGATTCGTCTTCCAAGGATCATTCCCTGA

mRNA sequence

ATGCAGGAAGGAATAGTCCGTGTGGTTGACACAAGAAGTCGATCACAAAATACCTGTCAGTCTGGGGTACACCCTCAAAAATCTGTAAAACGTCCTCGCAAAGCCAAGCCTGTTACTTCCTCTTCCAAACAGCATCATTCAAGTTCGTCCACTCCTGAGGTTGTGCATCCTCATAAGGCTACTACTAATGAAAATGTTGAACATAATACGACTGCTTCTGATCCTATCATTGATGATTCCCTTATCGATGAAGCTTCTATCCCTCAAAACCCTAATACCGATGTTGGTAAACCAGTGTTTGACAAAGACATTGCATCAGACTCTTCAGATGACCATGTTGTGATTGCAAAACTAGAACACGCTCTCGTTTACCTTCATCCTCTAAGAATTCATCTGATTCGTCTTCCAAGGATCATTCCCTGA

Coding sequence (CDS)

ATGCAGGAAGGAATAGTCCGTGTGGTTGACACAAGAAGTCGATCACAAAATACCTGTCAGTCTGGGGTACACCCTCAAAAATCTGTAAAACGTCCTCGCAAAGCCAAGCCTGTTACTTCCTCTTCCAAACAGCATCATTCAAGTTCGTCCACTCCTGAGGTTGTGCATCCTCATAAGGCTACTACTAATGAAAATGTTGAACATAATACGACTGCTTCTGATCCTATCATTGATGATTCCCTTATCGATGAAGCTTCTATCCCTCAAAACCCTAATACCGATGTTGGTAAACCAGTGTTTGACAAAGACATTGCATCAGACTCTTCAGATGACCATGTTGTGATTGCAAAACTAGAACACGCTCTCGTTTACCTTCATCCTCTAAGAATTCATCTGATTCGTCTTCCAAGGATCATTCCCTGA

Protein sequence

MQEGIVRVVDTRSRSQNTCQSGVHPQKSVKRPRKAKPVTSSSKQHHSSSSTPEVVHPHKATTNENVEHNTTASDPIIDDSLIDEASIPQNPNTDVGKPVFDKDIASDSSDDHVVIAKLEHALVYLHPLRIHLIRLPRIIP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
BhiUN66G22BhiUN66G22gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
BhiUN66M22.exon1BhiUN66M22.exon1exon
BhiUN66M22.exon2BhiUN66M22.exon2exon
BhiUN66M22.exon3BhiUN66M22.exon3exon
BhiUN66M22.exon4BhiUN66M22.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.BhiUN66M22cds.BhiUN66M22CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
BhiUN66M22BhiUN66M22-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25