BhiUN179M34 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGGACTAACGTATCATTTGATCATAATTTATATATTGAAAAAACCGTATGCCTTATCCTTCGTTTCTTCCTTCCTGCTTTCTCTCTTCCCTTTCACTCCTTCACCGCTACAACCCACGCCGGCACAACCTCTCCGTCGCAGTCGCCCGCCGGCACGCCTCTGTCGCCGTAGTTGTTTTCATTTCCTCATTCCCTCCCTGCTGCAACCACGCCGGCACGCACGACTACCGCATTCTTCTGTTCGTCGACCGTGGTCTACACTCTGTCTTCAGCAACCTCTCTCTCCCTCGTTCGCAGTATGAATCAATTTTTCTTTTGTTCAATTTATTTTCTTCGATTAGGCTGAAATTGGAATGAGGTCAAATTTAATCGAAAATCCTTCCAAATACGACACAAACTTGTATTCGAATTAATTAGGGTTAGTCTTTTTGTTGTTTGTGCTTCATTTTTTTTTATAATATGCTCTGTTAATCCTAGAAATGAGGGGAATACAAAAGAATTGTTTGTATCTCTTACTCTTAAGGTTGGGGTGGGGGTGGAAGATTTCTTTCTCTCTTAATTTTGAAGAATTTATGGTCTAAATTGTGGGTATTGATGTAAATTTAGGCCTTATCTCTCTCCTTTTTTTGAATAAGTTGCTGGCACCGAACAAGCTTCTATTCAACTTAATTTACCAATAAAATCACTGACGCTGGCTGGTTAAATTCATCATCTATTCGACTTATCGTGCAGCTTTGAGTTAATTTTCCTGTGGTCATGTTGGTCAGCTGTTGCTGAATTGTTAAAGATTGTTCGTCGTGAAAATCCATTCGCTGTTACAAGTAGTTGTCTTGCATGATCTCTTTTAATTTAAATTTTGACATTCTGTAAATGTTGCATTGAGTTTCGTGGACAAGGTTCATTCATATTCTTGCATTTTTTGTTCCCTTTTGTTTGTTATTGGAAAATGAAAAAAGAAGGGTTCTCTGGGAATGAGCACAACATTTATTTGACTTTCTTTAAGAAATAAGGGCCACATTGTAGTGGACCTTAACTTCATGGGAATTGTGAGGGCTCTTTTCAGGGTGTGATTTGAGATGCTCAATCTATGATATTATATCTATGGCTGTTCTGTTTGTTAAAGGAAGGTTATCTTTTTATCTGTTGTATGTATGTTACATGCACACTTACAAATTGATTATCAGATTTGTTTCCTCTTCTTGGAGTCTATTTCTGGGCTACGACTAATGCAAATATTTGTATTTTGTCTCATGAAATTTTATGACAGGCACACACAATTTCATGGCATCTCAGGTTGTCCGTGAGTGGATTGGAATTAACAAGTTTGCAATGGCTACACAAGACAAATTACTTGAGTTGCTGGGAAAACTGAAGCAGGTTATATTCAATTTTACCCATATGTCGTGATCGCAAAATCCATATCTACATGATCTATTTTTCCATTTAAGTCTTTGCACTGGTTTTTCACAATCTCCTAGGATTCATTGACTTTTGATATCTTTCTACAGAATGTCAACACATTGACAATACTTGTAATGGGGAAGGGTGGGGTTGGAAAATCATCCACTGTGAATTCCCTTATTGGTGAAAGAGCTGTATCTGTTAGTCCTTTTCAGGTACTTATTACTTATTCACTTCACTTGTATTTTGGTTGACTGAAGTTTACAGAAGGTGCATGATTTGATTTGAGAAATGAAATGTTTATAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCGGGCATCATAGAAGGAGGTTATATCAATGACCAGGCTCTTGAGATCATAAAACGGTAATTTCTATTCTTTTTTTAATAAAAAATTCAGATTGATTACGAGATAATTATCTGGTTCTTATCATTGTATATTTTTACCTTTCTTTTTTGGGATATTTCTGGGGGTTGGTGAGCAGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGGTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAGACAGCTTCGGTAAAGCAATATGGAATAGGGCTTTGGTCGTTCTCACTCATGCCCAATTTTCCCCACCAGATGGATTGCCATATGATGAATTTGTTTCCAGAAGATCAGAAGCTCTACTGAAAACTGTCCGATCTGGTGCCTCTATCAACAAAAATGATATCCAGGTGGCTTTTGCTATTTTTGTTAGCCATTGTCAGCATGTCTTGAGTTCCATTTGTTTTTTGTGCAGATTTTAGTTGTATGCCTATTTCCTGCCCCGTTTTCTTTCATTTTTTTCATCAATTAAAGTTTGGTATATCATTTTTTTTAAATGAGATTACTTTAAACATGTATAGATATCAGAATTGAATGACGTCACCTTTTGGGTCATGTCTTCATTTCTTGTAAACTACATTTTTGCTGCCAGTTTTGGAGCGGTGGAGGGCTGAATATCAAGTGAGCTCTTTTGTTGTTGGTCATATCCAAAACATGCAAATGTTCTGGGAAGTGATCACTGAAGATTTTGAAGGACTTTTTTTATATTAGTTAGTGTATGAATTGTCGATGTGTTATAATAATGGTGTTCAATGTCTTTGATCTTTCTTTCAGTAAAATCTCTCAGAGAACACACAAGATTTTCTTTATTTATTCGTTGCTCATTTAATGATATAAGTATTTATCTAAATTCTATACCTTCCTTCTAGGGGTCGAAGATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAACCAGAATGAGAAAGATGAAAAGGTTCTTACCTCTCTCTTTCTTTCTTCAAAATCCTCGTTCGAATGTATTCAAATTAATGGTTTGACTATTCTTTTTCACAATAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCACAGTGGTGTTGAATGGAAGCAAGTCTATTTGTGTTGATAAAAAGTTGATCGAAGGCCCAAACCCCAATCAGAGGGGGAAGTTGCTGATTCCCTTTATTTTTGCACTCCAAGTAAGTATCTGGAACTTAAAAAGATTCTATAATTTGCTTTTCTCTTATGACTCAGAGACTGAGTCTGTCTGTTTGCTTCTTTCTTTGGCTTGTTGATAGTATCTCTTCGTTGTCAAACCTATCGAGCGAGCAATAAGAAGTGATATATCAAAAGAAAGTAGACCGTCGTGGGAGATGCGTGATACGAGCTTGTCCAGCCGCAAGTACTGATTTGACCACATAAATATCCTCAACGATCGAAGTTTGGTGAGTTAATCTATGAGTCTTTTGTTCGTGTTGAGATTAGACCTTGTCGCGTTTTTGTAGAAGTTTGAATCTAAAGATAACTGAGTTTCTGTAAGTGAATTCGTATACGCTGCCAACCCTCAGCTCGGATACTCATAATTAGTTAGAAAATTGTCTCTTTCCTTTCGTTTTTGGCCTTCTCCAATCCCCATTACTCTTCCCAACTCTGGCAATCAAACATTCAAACCTGGCATGCAAGTGTTAATAATGTTGATGATCATAATATTTGATATTGTCTTTAATCCATAATCTTTAAGTGAAGTCATTAA CAAGGACTAACGTATCATTTGATCATAATTTATATATTGAAAAAACCGTATGCCTTATCCTTCGTTTCTTCCTTCCTGCTTTCTCTCTTCCCTTTCACTCCTTCACCGCTACAACCCACGCCGGCACAACCTCTCCGTCGCAGTCGCCCGCCGGCACGCCTCTGTCGCCGTAGTTGTTTTCATTTCCTCATTCCCTCCCTGCTGCAACCACGCCGGCACGCACGACTACCGCATTCTTCTGTTCGTCGACCGTGGTCTACACTCTGTCTTCAGCAACCTCTCTCTCCCTCGTTCGCAGCACACACAATTTCATGGCATCTCAGGTTGTCCGTGAGTGGATTGGAATTAACAAGTTTGCAATGGCTACACAAGACAAATTACTTGAGTTGCTGGGAAAACTGAAGCAGAATGTCAACACATTGACAATACTTGTAATGGGGAAGGGTGGGGTTGGAAAATCATCCACTGTGAATTCCCTTATTGGTGAAAGAGCTGTATCTGTTAGTCCTTTTCAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCGGGCATCATAGAAGGAGGTTATATCAATGACCAGGCTCTTGAGATCATAAAACGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGGTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAGACAGCTTCGGTAAAGCAATATGGAATAGGGCTTTGGTCGTTCTCACTCATGCCCAATTTTCCCCACCAGATGGATTGCCATATGATGAATTTGTTTCCAGAAGATCAGAAGCTCTACTGAAAACTGTCCGATCTGGTGCCTCTATCAACAAAAATGATATCCAGGGGTCGAAGATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAACCAGAATGAGAAAGATGAAAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCACAGTGGTGTTGAATGGAAGCAAGTCTATTTGTGTTGATAAAAAGTTGATCGAAGGCCCAAACCCCAATCAGAGGGGGAAGTTGCTGATTCCCTTTATTTTTGCACTCCAATATCTCTTCGTTGTCAAACCTATCGAGCGAGCAATAAGAAGTGATATATCAAAAGAAAGTAGACCGTCGTGGGAGATGCGTGATACGAGCTTGTCCAGCCGCAAGTACTGATTTGACCACATAAATATCCTCAACGATCGAAGTTTGGTGAGTTAATCTATGAGTCTTTTGTTCGTGTTGAGATTAGACCTTGTCGCGTTTTTGTAGAAGTTTGAATCTAAAGATAACTGAGTTTCTGTAAGTGAATTCGTATACGCTGCCAACCCTCAGCTCGGATACTCATAATTAGTTAGAAAATTGTCTCTTTCCTTTCGTTTTTGGCCTTCTCCAATCCCCATTACTCTTCCCAACTCTGGCAATCAAACATTCAAACCTGGCATGCAAGTGTTAATAATGTTGATGATCATAATATTTGATATTGTCTTTAATCCATAATCTTTAAGTGAAGTCATTAA ATGGCATCTCAGGTTGTCCGTGAGTGGATTGGAATTAACAAGTTTGCAATGGCTACACAAGACAAATTACTTGAGTTGCTGGGAAAACTGAAGCAGAATGTCAACACATTGACAATACTTGTAATGGGGAAGGGTGGGGTTGGAAAATCATCCACTGTGAATTCCCTTATTGGTGAAAGAGCTGTATCTGTTAGTCCTTTTCAGTCAGAAGTGCCAAGGCCTGTGATGGTTTCTCGCTCAAGGGCTGGATTTACATTAAACATCATTGATACACCGGGCATCATAGAAGGAGGTTATATCAATGACCAGGCTCTTGAGATCATAAAACGCTTTCTTTTGAATAAGACCATAGATATTCTTCTCTATGTGGACCGGTTGGATGCATATAGAGTAGATAACTTGGAAAAGCAGGTTATTAAGGCCATAACAGACAGCTTCGGTAAAGCAATATGGAATAGGGCTTTGGTCGTTCTCACTCATGCCCAATTTTCCCCACCAGATGGATTGCCATATGATGAATTTGTTTCCAGAAGATCAGAAGCTCTACTGAAAACTGTCCGATCTGGTGCCTCTATCAACAAAAATGATATCCAGGGGTCGAAGATTCCAGTTGTTTTGGTTGAGAACAGTGGACGGTGCAACCAGAATGAGAAAGATGAAAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCACTTGGTTGAGACAATCACCACAGTGGTGTTGAATGGAAGCAAGTCTATTTGTGTTGATAAAAAGTTGATCGAAGGCCCAAACCCCAATCAGAGGGGGAAGTTGCTGATTCCCTTTATTTTTGCACTCCAATATCTCTTCGTTGTCAAACCTATCGAGCGAGCAATAAGAAGTGATATATCAAAAGAAAGTAGACCGTCGTGGGAGATGCGTGATACGAGCTTGTCCAGCCGCAAGTACTGA MASQVVREWIGINKFAMATQDKLLELLGKLKQNVNTLTILVMGKGGVGKSSTVNSLIGERAVSVSPFQSEVPRPVMVSRSRAGFTLNIIDTPGIIEGGYINDQALEIIKRFLLNKTIDILLYVDRLDAYRVDNLEKQVIKAITDSFGKAIWNRALVVLTHAQFSPPDGLPYDEFVSRRSEALLKTVRSGASINKNDIQGSKIPVVLVENSGRCNQNEKDEKVLPNGIAWIPHLVETITTVVLNGSKSICVDKKLIEGPNPNQRGKLLIPFIFALQYLFVVKPIERAIRSDISKESRPSWEMRDTSLSSRKY
BLAST of BhiUN179M34 vs. TAIR10
Match: AT5G05000.2 (translocon at the outer envelope membrane of chloroplasts 34) HSP 1 Score: 439.1 bits (1128), Expect = 2.2e-123 Identity = 209/310 (67.42%), Postives = 265/310 (85.48%), Query Frame = 0
BLAST of BhiUN179M34 vs. TAIR10
Match: AT1G02280.1 (translocon at the outer envelope membrane of chloroplasts 33) HSP 1 Score: 369.8 bits (948), Expect = 1.7e-102 Identity = 181/294 (61.56%), Postives = 233/294 (79.25%), Query Frame = 0
BLAST of BhiUN179M34 vs. TAIR10
Match: AT3G16620.1 (translocon outer complex protein 120) HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33 Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 0
BLAST of BhiUN179M34 vs. TAIR10
Match: AT2G16640.1 (multimeric translocon complex in the outer envelope membrane 132) HSP 1 Score: 134.8 bits (338), Expect = 9.1e-32 Identity = 79/205 (38.54%), Postives = 112/205 (54.63%), Query Frame = 0
BLAST of BhiUN179M34 vs. TAIR10
Match: AT4G02510.1 (translocon at the outer envelope membrane of chloroplasts 159) HSP 1 Score: 125.9 bits (315), Expect = 4.2e-29 Identity = 76/209 (36.36%), Postives = 112/209 (53.59%), Query Frame = 0
BLAST of BhiUN179M34 vs. Swiss-Prot
Match: sp|Q41009|TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum OX=3888 GN=TOC34 PE=1 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 3.9e-133 Identity = 240/301 (79.73%), Postives = 264/301 (87.71%), Query Frame = 0
BLAST of BhiUN179M34 vs. Swiss-Prot
Match: sp|Q38906|TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC34 PE=1 SV=2) HSP 1 Score: 439.1 bits (1128), Expect = 4.1e-122 Identity = 209/310 (67.42%), Postives = 265/310 (85.48%), Query Frame = 0
BLAST of BhiUN179M34 vs. Swiss-Prot
Match: sp|O23680|TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC33 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.0e-101 Identity = 181/294 (61.56%), Postives = 233/294 (79.25%), Query Frame = 0
BLAST of BhiUN179M34 vs. Swiss-Prot
Match: sp|A8HYJ1|TOC34_CHLRE (Translocase of chloroplast 34 homolog, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TOC34 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35 Identity = 105/312 (33.65%), Postives = 158/312 (50.64%), Query Frame = 0
BLAST of BhiUN179M34 vs. Swiss-Prot
Match: sp|Q9LUS2|TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC120 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-32 Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 0
BLAST of BhiUN179M34 vs. TrEMBL
Match: tr|A0A1S4DXD3|A0A1S4DXD3_CUCME (Translocase of chloroplast OS=Cucumis melo OX=3656 GN=LOC107990978 PE=3 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 8.1e-152 Identity = 277/312 (88.78%), Postives = 293/312 (93.91%), Query Frame = 0
BLAST of BhiUN179M34 vs. TrEMBL
Match: tr|E5RDD4|E5RDD4_CUCME (Translocase of chloroplast OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 8.1e-152 Identity = 277/312 (88.78%), Postives = 293/312 (93.91%), Query Frame = 0
BLAST of BhiUN179M34 vs. TrEMBL
Match: tr|A0A0A0L123|A0A0A0L123_CUCSA (Translocase of chloroplast OS=Cucumis sativus OX=3659 GN=Csa_3G002790 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 2.0e-150 Identity = 276/312 (88.46%), Postives = 292/312 (93.59%), Query Frame = 0
BLAST of BhiUN179M34 vs. TrEMBL
Match: tr|A0A2P4I1L4|A0A2P4I1L4_QUESU (Translocase of chloroplast OS=Quercus suber OX=58331 GN=CFP56_26371 PE=3 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.3e-144 Identity = 259/312 (83.01%), Postives = 287/312 (91.99%), Query Frame = 0
BLAST of BhiUN179M34 vs. TrEMBL
Match: tr|A0A2N9GVH9|A0A2N9GVH9_FAGSY (Translocase of chloroplast OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31467 PE=3 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 7.6e-142 Identity = 254/312 (81.41%), Postives = 284/312 (91.03%), Query Frame = 0
BLAST of BhiUN179M34 vs. NCBI nr
Match: XP_022135187.1 (uncharacterized protein LOC111007215 [Momordica charantia] >XP_022135188.1 uncharacterized protein LOC111007215 [Momordica charantia]) HSP 1 Score: 578.6 bits (1490), Expect = 1.3e-161 Identity = 295/312 (94.55%), Postives = 303/312 (97.12%), Query Frame = 0
BLAST of BhiUN179M34 vs. NCBI nr
Match: XP_016900644.1 (PREDICTED: translocase of chloroplast 34-like [Cucumis melo] >XP_016900645.1 PREDICTED: translocase of chloroplast 34-like [Cucumis melo] >ADN33942.1 chloroplast outer envelope protein 34 [Cucumis melo subsp. melo]) HSP 1 Score: 545.4 bits (1404), Expect = 1.2e-151 Identity = 277/312 (88.78%), Postives = 293/312 (93.91%), Query Frame = 0
BLAST of BhiUN179M34 vs. NCBI nr
Match: XP_004146141.1 (PREDICTED: translocase of chloroplast 34 [Cucumis sativus] >XP_011650289.1 PREDICTED: translocase of chloroplast 34 [Cucumis sativus] >KGN55660.1 hypothetical protein Csa_3G002790 [Cucumis sativus]) HSP 1 Score: 540.8 bits (1392), Expect = 3.0e-150 Identity = 276/312 (88.46%), Postives = 292/312 (93.59%), Query Frame = 0
BLAST of BhiUN179M34 vs. NCBI nr
Match: XP_023530468.1 (uncharacterized protein LOC111793024 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145 Identity = 268/302 (88.74%), Postives = 283/302 (93.71%), Query Frame = 0
BLAST of BhiUN179M34 vs. NCBI nr
Match: XP_022930127.1 (uncharacterized protein LOC111436628 [Cucurbita moschata]) HSP 1 Score: 522.7 bits (1345), Expect = 8.5e-145 Identity = 268/302 (88.74%), Postives = 282/302 (93.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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