Bhi12M001460 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGCCCACAAGAAGAGCTTAGAATTATTACCAAATCCAAAATGAAGCCACAGCCTGCTAAAGCCTCAAGCAAATATAACGACACAAGAGAAAGAAATCAAGAAGAAGAAGAAAAAGAAATTGTTGTTGGATTTCCATGGGCTTCTTCAAGAGCTTATACATGTGGTTTTTGCAAAAGGAAATTTCAATCTGCACAAGCTCTTGGTGGCCACATGAATGTTCATCGACGAGATCGAGCGAAGCTCCGAAGAACTCCGTCGTTGGATTCGACTACTCATGATCATCATGATTTTCATGGGTCCTCATCTCAACCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGTTTTCATGGTGAAGAAGATGAATCAGATGGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTGTGAAGAACGAGGCTGCTTTGCTTAGTACTTCCAATGATATAGATTTGGAACTCAAATTAGGGTTTTAA ATGAGCAGCCCACAAGAAGAGCTTAGAATTATTACCAAATCCAAAATGAAGCCACAGCCTGCTAAAGCCTCAAGCAAATATAACGACACAAGAGAAAGAAATCAAGAAGAAGAAGAAAAAGAAATTGTTGTTGGATTTCCATGGGCTTCTTCAAGAGCTTATACATGTGGTTTTTGCAAAAGGAAATTTCAATCTGCACAAGCTCTTGGTGGCCACATGAATGTTCATCGACGAGATCGAGCGAAGCTCCGAAGAACTCCGTCGTTGGATTCGACTACTCATGATCATCATGATTTTCATGGGTCCTCATCTCAACCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGTTTTCATGGTGAAGAAGATGAATCAGATGGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTGTGAAGAACGAGGCTGCTTTGCTTAGTACTTCCAATGATATAGATTTGGAACTCAAATTAGGGTTTTAA ATGAGCAGCCCACAAGAAGAGCTTAGAATTATTACCAAATCCAAAATGAAGCCACAGCCTGCTAAAGCCTCAAGCAAATATAACGACACAAGAGAAAGAAATCAAGAAGAAGAAGAAAAAGAAATTGTTGTTGGATTTCCATGGGCTTCTTCAAGAGCTTATACATGTGGTTTTTGCAAAAGGAAATTTCAATCTGCACAAGCTCTTGGTGGCCACATGAATGTTCATCGACGAGATCGAGCGAAGCTCCGAAGAACTCCGTCGTTGGATTCGACTACTCATGATCATCATGATTTTCATGGGTCCTCATCTCAACCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGTTTTCATGGTGAAGAAGATGAATCAGATGGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTGTGAAGAACGAGGCTGCTTTGCTTAGTACTTCCAATGATATAGATTTGGAACTCAAATTAGGGTTTTAA MSSPQEELRIITKSKMKPQPAKASSKYNDTRERNQEEEEKEIVVGFPWASSRAYTCGFCKRKFQSAQALGGHMNVHRRDRAKLRRTPSLDSTTHDHHDFHGSSSQPIKFLKLYDFSSFHGEEDESDGGCKIWKKVNKFVKNEAALLSTSNDIDLELKLGF
BLAST of Bhi12M001460 vs. Swiss-Prot
Match: sp|Q9SLB8|ZFP11_ARATH (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Bhi12M001460 vs. Swiss-Prot
Match: sp|O80942|ZFP10_ARATH (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Bhi12M001460 vs. Swiss-Prot
Match: sp|Q9LHS9|RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09 Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Bhi12M001460 vs. Swiss-Prot
Match: sp|Q9SR34|TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
BLAST of Bhi12M001460 vs. Swiss-Prot
Match: sp|Q38895|SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of Bhi12M001460 vs. TAIR10
Match: AT2G42410.1 (zinc finger protein 11) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Bhi12M001460 vs. TAIR10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Bhi12M001460 vs. TAIR10
Match: AT2G37740.1 (zinc-finger protein 10) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Bhi12M001460 vs. TAIR10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10 Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of Bhi12M001460 vs. TAIR10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10 Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Bhi12M001460 vs. TrEMBL
Match: tr|A0A0A0LNQ1|A0A0A0LNQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190780 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 9.3e-51 Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Bhi12M001460 vs. TrEMBL
Match: tr|A0A1S3CPU8|A0A1S3CPU8_CUCME (transcriptional regulator SUPERMAN OS=Cucumis melo OX=3656 GN=LOC103502868 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49 Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Bhi12M001460 vs. TrEMBL
Match: tr|A0A2I4DUB9|A0A2I4DUB9_9ROSI (transcriptional regulator SUPERMAN-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108983529 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18 Identity = 63/123 (51.22%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Bhi12M001460 vs. TrEMBL
Match: tr|A0A2P4LVP4|A0A2P4LVP4_QUESU (Transcriptional regulator superman OS=Quercus suber OX=58331 GN=CFP56_48395 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.2e-11 Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 0
BLAST of Bhi12M001460 vs. TrEMBL
Match: tr|A0A1S3VT87|A0A1S3VT87_VIGRR (transcriptional regulator SUPERMAN-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106778119 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.4e-11 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Bhi12M001460 vs. NCBI nr
Match: XP_011650145.1 (PREDICTED: zinc finger protein 3-like [Cucumis sativus] >KGN61621.1 hypothetical protein Csa_2G190780 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Bhi12M001460 vs. NCBI nr
Match: XP_008465205.1 (PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo]) HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49 Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Bhi12M001460 vs. NCBI nr
Match: XP_023514445.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.8 bits (447), Expect = 5.9e-41 Identity = 103/160 (64.38%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of Bhi12M001460 vs. NCBI nr
Match: XP_023000620.1 (transcriptional regulator SUPERMAN-like [Cucurbita maxima]) HSP 1 Score: 176.4 bits (446), Expect = 7.7e-41 Identity = 108/160 (67.50%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Bhi12M001460 vs. NCBI nr
Match: XP_022930268.1 (zinc finger protein 10-like [Cucurbita moschata]) HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40 Identity = 110/160 (68.75%), Postives = 123/160 (76.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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