Bhi11M001634 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGATCAATAATGTCATCAGAGCCTCTTGTTGTTGGGAGAGTGATAGGAGATGTTCTTGATTCCTTCACTCAAAGCATGAAGATGTGTGTTTTTTATAGTAATAATAAACAAGTTTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAGGGTTGCAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGGTTTGGTTTTTTCTTTTTTTCCCCTTTGAGATTATGACTAACCCAATTGCTTCTCTCTTTACTTGTTATGGATATGAATAAATGGTTTATTTGAGGTTTGAGTCTCTCGCTCTGCATGCTAAAGAAAATAAAAATCAAGATTTTGGGTTGTTTGGTCTATCAATCTAAGTATAAGTATTAATTATATCATTAAAAAAAGTTTAGATATTCAAATTTCTGCCGTGCATATTGAATAATTTTTTTAAAAAAATAAGAAAAAAATGTAAATATTTTTTAGATTTTTCTATCGGTAAGAATTTCCATTTTTAAATTATTTGTTAGATTTATACTAGTTTTCAAACTCACAAAGAAAAAAAAACAATTAAATTTACCACAACTTTTTTCACTAGACATAGTTTAGTGTCTATATCAGCGTCTATCAATGATAAACTTCTATCAATTCCTATTACTGATAGATACCGATGAACATCTATCAATCTCTATCAAAGAATATTAAAATTTTGTTATTTTGTTTAAAAAGTTTCCCTTATTTTTCTATTTTTAAAAATTTTCCTATATATTTCTTCTCTCGTGAATTTGTTCAATGCTTATGACATCGATATTTTCTTAAGAAATGGTAGGTTTTGAATTCTCTTCTTCATATTTGTAATGTTGTTTCTTCTTTTGAACTATAAAAAATATACTAAGAGATGTGTTTTATCTAAATATCTTTTAATGTTTTCATTGCTTGATTTAATTTTTTTTTTAATTTTTTTTTTTTACAGATTATGACTGACCCAGATGTTCCTGGGCCAAGTGATCCTTATTTAAGAGAACATTTACATTGGTAA ATGGCAAGATCAATAATGTCATCAGAGCCTCTTGTTGTTGGGAGAGTGATAGGAGATGTTCTTGATTCCTTCACTCAAAGCATGAAGATGTGTGTTTTTTATAGTAATAATAAACAAGTTTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAGGGTTGCAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGATTATGACTGACCCAGATGTTCCTGGGCCAAGTGATCCTTATTTAAGAGAACATTTACATTGGTAA ATGGCAAGATCAATAATGTCATCAGAGCCTCTTGTTGTTGGGAGAGTGATAGGAGATGTTCTTGATTCCTTCACTCAAAGCATGAAGATGTGTGTTTTTTATAGTAATAATAAACAAGTTTTCAATGGCCATGAGTTCTTTCCTTCTGCTGTTGCTGCTAAACCTAGGGTTGCAATCCATGGAGGAGACTTGAGATCTTTCTTCACTCTGATTATGACTGACCCAGATGTTCCTGGGCCAAGTGATCCTTATTTAAGAGAACATTTACATTGGTAA MARSIMSSEPLVVGRVIGDVLDSFTQSMKMCVFYSNNKQVFNGHEFFPSAVAAKPRVAIHGGDLRSFFTLIMTDPDVPGPSDPYLREHLHW
BLAST of Bhi11M001634 vs. Swiss-Prot
Match: sp|O82088|SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.9e-35 Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 0
BLAST of Bhi11M001634 vs. Swiss-Prot
Match: sp|Q41261|CEN_ANTMA (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.6e-34 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of Bhi11M001634 vs. Swiss-Prot
Match: sp|Q9ZNV5|CEN_ARATH (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-34 Identity = 65/91 (71.43%), Postives = 80/91 (87.91%), Query Frame = 0
BLAST of Bhi11M001634 vs. Swiss-Prot
Match: sp|Q9XH42|CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 2.7e-34 Identity = 63/84 (75.00%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of Bhi11M001634 vs. Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.6e-34 Identity = 62/84 (73.81%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of Bhi11M001634 vs. TAIR10
Match: AT2G27550.1 (centroradialis) HSP 1 Score: 146.0 bits (367), Expect = 1.2e-35 Identity = 65/91 (71.43%), Postives = 80/91 (87.91%), Query Frame = 0
BLAST of Bhi11M001634 vs. TAIR10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 137.9 bits (346), Expect = 3.1e-33 Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of Bhi11M001634 vs. TAIR10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 116.3 bits (290), Expect = 9.8e-27 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Bhi11M001634 vs. TAIR10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 103.2 bits (256), Expect = 8.6e-23 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Bhi11M001634 vs. TAIR10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 97.4 bits (241), Expect = 4.7e-21 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of Bhi11M001634 vs. TrEMBL
Match: tr|A0A1S3B659|A0A1S3B659_CUCME (protein SELF-PRUNING OS=Cucumis melo OX=3656 GN=LOC103486602 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42 Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Bhi11M001634 vs. TrEMBL
Match: tr|B9ZYL2|B9ZYL2_CUCSA (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1b PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.4e-42 Identity = 87/92 (94.57%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Bhi11M001634 vs. TrEMBL
Match: tr|A0A0B2R6S5|A0A0B2R6S5_GLYSO (CEN-like protein 2 OS=Glycine soja OX=3848 GN=glysoja_026220 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34 Identity = 65/88 (73.86%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of Bhi11M001634 vs. TrEMBL
Match: tr|G7Z0B6|G7Z0B6_SOYBN (CENTRORADIALIS-like protein 3 OS=Glycine max OX=3847 GN=CEN3 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34 Identity = 65/88 (73.86%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of Bhi11M001634 vs. TrEMBL
Match: tr|G1EAG6|G1EAG6_POPBA (Terminal flowering 1 protein 1 (Fragment) OS=Populus balsamifera OX=73824 GN=TFL1.1 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.4e-34 Identity = 66/84 (78.57%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Bhi11M001634 vs. NCBI nr
Match: XP_008442833.1 (PREDICTED: protein SELF-PRUNING [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42 Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Bhi11M001634 vs. NCBI nr
Match: NP_001267654.1 (protein SELF-PRUNING-like [Cucumis sativus] >BAH28255.1 TFL1-like protein [Cucumis sativus] >KGN59123.1 hypothetical protein Csa_3G776350 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 5.2e-42 Identity = 87/92 (94.57%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Bhi11M001634 vs. NCBI nr
Match: XP_022144705.1 (protein CENTRORADIALIS-like [Momordica charantia]) HSP 1 Score: 175.3 bits (443), Expect = 9.8e-41 Identity = 85/91 (93.41%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of Bhi11M001634 vs. NCBI nr
Match: XP_022983119.1 (protein SELF-PRUNING-like [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37 Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Bhi11M001634 vs. NCBI nr
Match: XP_023528346.1 (protein SELF-PRUNING-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.5 bits (410), Expect = 6.6e-37 Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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