Bhi11M000947 (mRNA) Wax gourd

Overview
NameBhi11M000947
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 33569126 .. 33569326 (+)
Sequence length201
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCAAGAATAAGAGCATTGGTTTGGTGGCAGCGGTTATGGTGATGGTGGTTTCTATGATCGTCACTCTAGCTGACCCTATCATGAAGACCGAGAATGTGGCGGTCGAAGTCGTGGTGAACCGGGGGATGCATGCTTTCCCAAGGAAAGGTGTTCTAAAAACTGGAAAAAAATGGAGTATGTCTAGTAAAAGATAA

mRNA sequence

ATGGAGAGCAAGAATAAGAGCATTGGTTTGGTGGCAGCGGTTATGGTGATGGTGGTTTCTATGATCGTCACTCTAGCTGACCCTATCATGAAGACCGAGAATGTGGCGGTCGAAGTCGTGGTGAACCGGGGGATGCATGCTTTCCCAAGGAAAGGTGTTCTAAAAACTGGAAAAAAATGGAGTATGTCTAGTAAAAGATAA

Coding sequence (CDS)

ATGGAGAGCAAGAATAAGAGCATTGGTTTGGTGGCAGCGGTTATGGTGATGGTGGTTTCTATGATCGTCACTCTAGCTGACCCTATCATGAAGACCGAGAATGTGGCGGTCGAAGTCGTGGTGAACCGGGGGATGCATGCTTTCCCAAGGAAAGGTGTTCTAAAAACTGGAAAAAAATGGAGTATGTCTAGTAAAAGATAA

Protein sequence

MESKNKSIGLVAAVMVMVVSMIVTLADPIMKTENVAVEVVVNRGMHAFPRKGVLKTGKKWSMSSKR
Homology
[Close]
BLAST of Bhi11M000947 vs. TrEMBL
Match: tr|A0A0A0KT53|A0A0A0KT53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 1  MESKNKSIGLVA-AVMVMVVSMIVTLAD-PIMKTENVAVEVVVNRGMHAFPRKGVLKTGK 59
          MESK KSI  VA  V+VMV  MI TLAD   + TENVA  V+V+ G HAFPRK V+K G+
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

[Close]
BLAST of Bhi11M000947 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_4G000830 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-04
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 1  MESKNKSIGLVA-AVMVMVVSMIVTLAD-PIMKTENVAVEVVVNRGMHAFPRKGVLKTGK 59
          MESK KSI  VA  V+VMV  MI TLAD   + TENVA  V+V+ G HAFPRK V+K G+
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNGE 60

The following BLAST results are available for this feature:
BLAST of Bhi11M000947 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11M000947 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11M000947 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KT53|A0A0A0KT53_CUCSA1.6e-0460.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1[more]
BLAST of Bhi11M000947 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52763.12.4e-0460.00hypothetical protein Csa_4G000830 [Cucumis sativus][more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi11G000947Bhi11G000947gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi11M000947.exon1Bhi11M000947.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi11M000947cds.Bhi11M000947CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi11M000947Bhi11M000947-proteinpolypeptide