Bhi11M000004 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGACGTGCGACTTTGTCACGAAATTCCCGCCTTTTCTATCGGATTTTCCCTACGGAATAATTTTCTGGGAAAATTTTTGAAGGAAAACCAATAGAATTAAAATTAATTATTGTTTTTAAAAAAATTTTAAAATTAATTTTTATAAAAAAAGGAGATTAGATTAGGATAATAGTAGGTTTTTCGAAGAATTTTGGCTTTCGTTTCGATGCAATTTTTAATTTCTTCGAAACCAATCGGAAAGTTTTAATTCGTTACAAAACTTCTCTGTTTATCGATCCTTCTTGTTCTTCTGAAAAATTCTTTAAGGATCCGATTTTTCGGTGAGCTAGAATATTCACGGGCGATTCGGTCGATCCACCGAACGAGGAGGAAGAACGACGACATTGTTGCACGTTTCGGATCGTTCGATCTCGATCTCGATCTCAAAAAGCCGTTCTGAAAATTCTCAGTTGGTTTCGATCGATTCGTTTTTGTTTTGGGAAATCCTGATTGGAATTTTCCAGGTATTGATGTTTTATTGTTGTTTGTGGAGTGGATTGGATGAATCCAAAGGGGGAAAAATCCTGAAAACCTAAGGATTCGATTTCCTATTCTACTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTGGAGGTAAATTGGTAATTGAATGCGGATTTTCCTTTTTTTGGTTTTGGTTGAGATTTGGAATTGGAGATAGATTATTGTTTGGGGATCTTGTTATAGGTTTTACAGAAATTTTGAAGCAATTAGGGCTCTGTTTATTAACATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGGGAAATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTATTACGATCACTTGGTTTGAAGCCGAGTCCAGATCAGCTTGAGAATTTGATAATGAAGGCGGATACGAACAGCAATGGATTAGTGGAATTCTCAGAGTTCGTAGCTCTGGTGGAGCCAGAGCTGGTATCGGCGAAATGCCCTTACACAGAGGAGCAATTAAAGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCTGAGTTGGCTCACTCGATGGCCAAACTCGGCCACGCTCTTACGGCAGAGGAGCTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTTTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGATGGTTTTTCTGGTAACTCTCTCTTTCTCTCATTGGAAAAATTGCTGCAGTTTTCTTTCAATTGAGAGTGTTAGGACTTTGATTCACATGTTGGGTTTGTTTAGAATATTGAGATTATAAAGTCTGTGCATACCTTTGCTTTATGTGTACTATATCTATGTACTTGTGTTAATGTTAGAAAGTTATACACAACTTAGATTATACTAATCTAGATTTTTGAAGCCATATCTATAAAGTTATCCATTATATCTTGTCAACCATGAACTCTTACATTAATTATAGACTACATAAACTTGATAATCAAAATAGAAAATACAGGGCATATAAACTCAAATATGTGAACTTGTAAAATACAGGGCTACAGAGTCTCTTTATTGAGACTTTTTCTTATTTAGGGGTTGTTTGGAGGTACCGAGTGAGTTCTAAATCTGGAATTACTAAAGTTAGGAAGTATGTATGTGAAATGTAGAGTTGTTTAATTTGGAGTTAGTAAACATTAGATGGGAGGAGAGAGAAAAATATGAAGTTTTTCCATAAATGTAGAAACTTCAAAAGTATCATTATTGAAGTGGATTATTTCACACCCGCATATGAAGCCAGTGGGCCAAGTGGGCCAAACACCCGCAGTGTATTTGGCATTTGGCTTAGGAGTATTTCTTTTTTATCATTGTAAAAGGTTTTTGTTTTGTCCATGTATGATTTTTAGAAATTCTTTATGGGCTTTTCTTTTTTGAAAAAAAAGTAGGGATAAACTTGTTACTCAGTTTTTCTACCGTTAAATCACGGAAAATTACATTGTATGACAAATATATTTTAAGAAACCAAAACTGTGACCTAAACTTTTTTGTAATAATCATATAACAATCACATAATAATCATATAACAATCACATAAAAATCAGATAACAATTATATAGAAATCAGATAATAATCAAATTTTTAGGCGAAAGTCATTTGCCATGTTCGCAAAAAAGTAAAACCTAGGGACATGCGTCGAATTTTCAATTTATTTATTTCCCCTAAATCACCTTATTTGCACAATAAAGGGGTACAACCTCGAGGAAGATCGTAGGGTTTCCAATTCTCCCTTTTCTCCTATCAATCCATATACAAAAGCATGCCCCTGATAAGTACTACACATTTACTTGAATTCTCTTCTCTCAGCTTCTAAATTATACTATTTACATCTCACTATCCACTTGTACAATCACAAATATCTATGTTTTTTTGTTCTTTTTATAAAACCTTACGTCAATTGTGGAGTAAAAGGTTTAAATCTATGATTTGTTAAAGAAAGTAGTTCTGCCTTATCTGCCATGCTATGCTATCCCTCGTTTTAACAACCTCTTTCGTCGTTTACGATGTTGACTACTTATAAAATGGTTTATATTATTAATGCAGGTTGGATCGTGCATCCATTTTAGTCAAGTGATCATTGTGAAAAATGTTAGCATTATTGTTATATAAACTTCTAGCAACCATTTGAACATGAAAAACTAAGGTGTGTGCATGGACGCTCGATCTAGCCTGCATTAATAATATAAACCTTTTTAGCATTATTGTTATATAAACTTCTGACAACCATTTGAACATGAAAAACTAAGATGTGTGCATGGATGCGCGATCCAACTGTGTTAAAAATATAAACATTTTTAGTATTATTGTTATATAAACTTTTGGCAACCATTTGAACATGAAAAATTAAGGTGTGTGCTTATAAATCCTTTTGCAGTGACCAAAAACAAACAGCAAATGGGCTATATTTGGAGGGCACATTACGGTACCAACACGGAGATCTTATCAAGAAATTGAAAATGGTATTTATGGGTTAAGTTTGAATGTTTATTTAGTCTGAATCTACCTATTTCTCTGCTTGAAAAGGACACGAGTTTAAGTTGTTCGGTTTCAAATTTTGGTTGTTTATAAAAGTTGGAGTTCAAACCAAACCAAACCAAACACTGCAGGGAATTTTGTGAAGGATTTTAGTTCCAATTCCAGTTTTCAATATGGAATGGTGGGTAGTTTGATGCTTTCATGTGTTAGTTTGTTTTTTTCCTTTGGAGATCTTGTTTAATTTCATTTTTCAATTCCCA AAAAAAGACGTGCGACTTTGTCACGAAATTCCCGCCTTTTCTATCGGATTTTCCCTACGGAATAATTTTCTGGGAAAATTTTTGAAGGAAAACCAATAGAATTAAAATTAATTATTGTTTTTAAAAAAATTTTAAAATTAATTTTTATAAAAAAAGGAGATTAGATTAGGATAATAGTAGGTTTTTCGAAGAATTTTGGCTTTCGTTTCGATGCAATTTTTAATTTCTTCGAAACCAATCGGAAAGTTTTAATTCGTTACAAAACTTCTCTGTTTATCGATCCTTCTTGTTCTTCTGAAAAATTCTTTAAGGATCCGATTTTTCGGTGAGCTAGAATATTCACGGGCGATTCGGTCGATCCACCGAACGAGGAGGAAGAACGACGACATTGTTGCACGTTTCGGATCGTTCGATCTCGATCTCGATCTCAAAAAGCCGTTCTGAAAATTCTCAGTTGGTTTCGATCGATTCGTTTTTGTTTTGGGAAATCCTGATTGGAATTTTCCAGGTATTGATGTTTTATTGTTGTTTGTGGAGTGGATTGGATGAATCCAAAGGGGGAAAAATCCTGAAAACCTAAGGATTCGATTTCCTATTCTACTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTGGAGGTTTTACAGAAATTTTGAAGCAATTAGGGCTCTGTTTATTAACATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGGGAAATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTATTACGATCACTTGGTTTGAAGCCGAGTCCAGATCAGCTTGAGAATTTGATAATGAAGGCGGATACGAACAGCAATGGATTAGTGGAATTCTCAGAGTTCGTAGCTCTGGTGGAGCCAGAGCTGGTATCGGCGAAATGCCCTTACACAGAGGAGCAATTAAAGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCTGAGTTGGCTCACTCGATGGCCAAACTCGGCCACGCTCTTACGGCAGAGGAGCTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTTTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGATGGTTTTTCTGTGACCAAAAACAAACAGCAAATGGGCTATATTTGGAGGGCACATTACGGTACCAACACGGAGATCTTATCAAGAAATTGAAAATGGTATTTATGGGTTAAGTTTGAATGTTTATTTAGTCTGAATCTACCTATTTCTCTGCTTGAAAAGGACACGAGTTTAAGTTGTTCGGTTTCAAATTTTGGTTGTTTATAAAAGTTGGAGTTCAAACCAAACCAAACCAAACACTGCAGGGAATTTTGTGAAGGATTTTAGTTCCAATTCCAGTTTTCAATATGGAATGGTGGGTAGTTTGATGCTTTCATGTGTTAGTTTGTTTTTTTCCTTTGGAGATCTTGTTTAATTTCATTTTTCAATTCCCA ATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCGGAGTTGAGGGAAATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTTGAACTCGGATCGCTATTACGATCACTTGGTTTGAAGCCGAGTCCAGATCAGCTTGAGAATTTGATAATGAAGGCGGATACGAACAGCAATGGATTAGTGGAATTCTCAGAGTTCGTAGCTCTGGTGGAGCCAGAGCTGGTATCGGCGAAATGCCCTTACACAGAGGAGCAATTAAAGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCTGAGTTGGCTCACTCGATGGCCAAACTCGGCCACGCTCTTACGGCAGAGGAGCTCACCGGAATGATCAGGGAAGCCGATACCGATGGCGATGGCAGAATCAATTTTCAAGAGTTTTCTCAGGCAATTACTTCTGCTGCATTTGATAATTCCTGGGCATGA MSDKQPIKLDDEQIAELREIFRSFDRNNDGSLTQLELGSLLRSLGLKPSPDQLENLIMKADTNSNGLVEFSEFVALVEPELVSAKCPYTEEQLKQLFRMFDRDGNGFITAAELAHSMAKLGHALTAEELTGMIREADTDGDGRINFQEFSQAITSAAFDNSWA
BLAST of Bhi11M000004 vs. TAIR10
Match: AT3G03000.1 (EF hand calcium-binding protein family) HSP 1 Score: 224.9 bits (572), Expect = 3.5e-59 Identity = 125/157 (79.62%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Bhi11M000004 vs. TAIR10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 212.2 bits (539), Expect = 2.3e-55 Identity = 115/165 (69.70%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of Bhi11M000004 vs. TAIR10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 99.4 bits (246), Expect = 2.2e-21 Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of Bhi11M000004 vs. TAIR10
Match: AT2G41100.1 (Calcium-binding EF hand family protein) HSP 1 Score: 91.7 bits (226), Expect = 4.6e-19 Identity = 49/127 (38.58%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of Bhi11M000004 vs. TAIR10
Match: AT3G51920.1 (calmodulin 9) HSP 1 Score: 80.9 bits (198), Expect = 8.1e-16 Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 0
BLAST of Bhi11M000004 vs. Swiss-Prot
Match: sp|Q9M8U1|CML18_ARATH (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 6.3e-58 Identity = 125/157 (79.62%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Bhi11M000004 vs. Swiss-Prot
Match: sp|Q9LQN4|CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 4.2e-54 Identity = 115/165 (69.70%), Postives = 124/165 (75.15%), Query Frame = 0
BLAST of Bhi11M000004 vs. Swiss-Prot
Match: sp|Q9AWK2|CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 4.7e-53 Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0
BLAST of Bhi11M000004 vs. Swiss-Prot
Match: sp|Q6L5F4|CML14_ORYSJ (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29 Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Bhi11M000004 vs. Swiss-Prot
Match: sp|P04464|CALM_WHEAT (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-23 Identity = 67/142 (47.18%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of Bhi11M000004 vs. TrEMBL
Match: tr|A0A1S3BKU3|A0A1S3BKU3_CUCME (probable calcium-binding protein CML18 OS=Cucumis melo OX=3656 GN=LOC103490757 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.4e-72 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Bhi11M000004 vs. TrEMBL
Match: tr|A0A0A0L1S8|A0A0A0L1S8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008850 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 6.3e-71 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Bhi11M000004 vs. TrEMBL
Match: tr|V4T3K5|V4T3K5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002732mg PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.6e-64 Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0
BLAST of Bhi11M000004 vs. TrEMBL
Match: tr|A0A068VFR9|A0A068VFR9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00010775001 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 5.7e-64 Identity = 129/163 (79.14%), Postives = 137/163 (84.05%), Query Frame = 0
BLAST of Bhi11M000004 vs. TrEMBL
Match: tr|A0A2R6QPE0|A0A2R6QPE0_ACTCH (Calcium-binding protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16065 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 5.7e-64 Identity = 128/161 (79.50%), Postives = 138/161 (85.71%), Query Frame = 0
BLAST of Bhi11M000004 vs. NCBI nr
Match: XP_008448654.1 (PREDICTED: probable calcium-binding protein CML18 [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 6.6e-72 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Bhi11M000004 vs. NCBI nr
Match: XP_022923350.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_022965322.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965323.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965324.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_023552506.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71 Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of Bhi11M000004 vs. NCBI nr
Match: XP_022145375.1 (probable calcium-binding protein CML18 [Momordica charantia]) HSP 1 Score: 277.3 bits (708), Expect = 3.3e-71 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Bhi11M000004 vs. NCBI nr
Match: XP_004148765.1 (PREDICTED: probable calcium-binding protein CML18 [Cucumis sativus] >KGN55728.1 hypothetical protein Csa_3G008850 [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 9.5e-71 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Bhi11M000004 vs. NCBI nr
Match: XP_022924802.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_023540544.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70 Identity = 142/163 (87.12%), Postives = 145/163 (88.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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