Bhi10M001435 (mRNA) Wax gourd

NameBhi10M001435
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 45512270 .. 45513227 (+)
Sequence length612
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGAGTAATCTCTGCAAACCCATGAACAGTTGCATTCGGAGGCTTCTTCCTTTCTTCTTTTTAGTCTTCAATGTAAAGATTTGGAATCTCACTTCCATTCTGCTCAAGAGATGATTCGGATCTAGTACCAAGAGTTTGAGCAATGGGAGAAAGTCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTATTGGCTAACGAACTTGAGTAAAAAAAAAAACATATCAATCTAGTCAGAGGTTTGATGAACAAATATAATGAAAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTTATATTTCCACCTGAACACGAAGTTGACTGGACCGAAATTGATACCATGTATAATTTTATTCGTTCTTAAAACAGTCTTCAGACCCTGCAAAACTTGTCTTGAATCTGATTTTTAGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

mRNA sequence

ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGATCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

Coding sequence (CDS)

ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGATCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

Protein sequence

MEKISSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKGREELRLKEIQHKVNKEVELNLAQERLGVLSKDIKLKEDEVDKVCTRFLDVEIEFAKKEKDFDQLSMEPNEKGSFDQQLKKEQLGLEESFLRWSTLLFKTIRADLTHYWSKGKRICNEACS
BLAST of Bhi10M001435 vs. TrEMBL
Match: tr|A0A0A0LMH5|A0A0A0LMH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277090 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-10
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 0

Query: 46  ERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKGREELRLKEIQHKV------NKE 105
           +RR E+L K+ EK   +LKEIESLKADMDSQILLLEK REELRLKEIQHK       +KE
Sbjct: 427 KRRMEELNKKDEKVSLYLKEIESLKADMDSQILLLEKDREELRLKEIQHKAPDEELESKE 486

Query: 106 VELNLAQERLGVLSKDIKLKED 122
            E+NL +  +   ++ +KL +D
Sbjct: 487 KEINLVRALIQKCNEKVKLIDD 508

BLAST of Bhi10M001435 vs. NCBI nr
Match: XP_004151190.1 (PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-10
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 0

Query: 46  ERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKGREELRLKEIQHKV------NKE 105
           +RR E+L K+ EK   +LKEIESLKADMDSQILLLEK REELRLKEIQHK       +KE
Sbjct: 430 KRRMEELNKKDEKVSLYLKEIESLKADMDSQILLLEKDREELRLKEIQHKAPDEELESKE 489

Query: 106 VELNLAQERLGVLSKDIKLKED 122
            E+NL +  +   ++ +KL +D
Sbjct: 490 KEINLVRALIQKCNEKVKLIDD 511

BLAST of Bhi10M001435 vs. NCBI nr
Match: XP_011649315.1 (PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis sativus] >KGN61967.1 hypothetical protein Csa_2G277090 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-10
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 0

Query: 46  ERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKGREELRLKEIQHKV------NKE 105
           +RR E+L K+ EK   +LKEIESLKADMDSQILLLEK REELRLKEIQHK       +KE
Sbjct: 427 KRRMEELNKKDEKVSLYLKEIESLKADMDSQILLLEKDREELRLKEIQHKAPDEELESKE 486

Query: 106 VELNLAQERLGVLSKDIKLKED 122
            E+NL +  +   ++ +KL +D
Sbjct: 487 KEINLVRALIQKCNEKVKLIDD 508

BLAST of Bhi10M001435 vs. NCBI nr
Match: XP_022932917.1 (uncharacterized protein LOC111439474 isoform X1 [Cucurbita moschata])

HSP 1 Score: 67.4 bits (163), Expect = 6.4e-08
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   KS++ RS+N+K EE   E+R E+L K+ EK  T+LKEIE LKAD+ SQ+ LL+KG
Sbjct: 423 FNLLRKSIEERSKNLKNEENNFEKRLEELNKKDEKVSTYLKEIEYLKADLASQVALLDKG 482

Query: 84  REELRLKEIQHK------VNKEVELNLAQERLGVLSKDIKLKEDE 123
            E  RLKEIQHK       +KE +++L ++ +   ++ ++L + E
Sbjct: 483 GEG-RLKEIQHKGLGEKLDSKEKDISLVRDLMETCNEKVRLVKKE 526

BLAST of Bhi10M001435 vs. NCBI nr
Match: XP_022932920.1 (uncharacterized protein LOC111439474 isoform X3 [Cucurbita moschata])

HSP 1 Score: 67.4 bits (163), Expect = 6.4e-08
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   KS++ RS+N+K EE   E+R E+L K+ EK  T+LKEIE LKAD+ SQ+ LL+KG
Sbjct: 406 FNLLRKSIEERSKNLKNEENNFEKRLEELNKKDEKVSTYLKEIEYLKADLASQVALLDKG 465

Query: 84  REELRLKEIQHK------VNKEVELNLAQERLGVLSKDIKLKEDE 123
            E  RLKEIQHK       +KE +++L ++ +   ++ ++L + E
Sbjct: 466 GEG-RLKEIQHKGLGEKLDSKEKDISLVRDLMETCNEKVRLVKKE 509

BLAST of Bhi10M001435 vs. NCBI nr
Match: XP_022932919.1 (uncharacterized protein LOC111439474 isoform X2 [Cucurbita moschata])

HSP 1 Score: 67.4 bits (163), Expect = 6.4e-08
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   KS++ RS+N+K EE   E+R E+L K+ EK  T+LKEIE LKAD+ SQ+ LL+KG
Sbjct: 423 FNLLRKSIEERSKNLKNEENNFEKRLEELNKKDEKVSTYLKEIEYLKADLASQVALLDKG 482

Query: 84  REELRLKEIQHK------VNKEVELNLAQERLGVLSKDIKLKEDE 123
            E  RLKEIQHK       +KE +++L ++ +   ++ ++L + E
Sbjct: 483 GEG-RLKEIQHKGLGEKLDSKEKDISLVRDLMETCNEKVRLVKKE 526

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LMH5|A0A0A0LMH5_CUCSA2.7e-1057.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_004151190.14.0e-1057.32PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis sativus][more]
XP_011649315.14.0e-1057.32PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis sativus] >KGN61967.1 hypot... [more]
XP_022932917.16.4e-0843.81uncharacterized protein LOC111439474 isoform X1 [Cucurbita moschata][more]
XP_022932920.16.4e-0843.81uncharacterized protein LOC111439474 isoform X3 [Cucurbita moschata][more]
XP_022932919.16.4e-0843.81uncharacterized protein LOC111439474 isoform X2 [Cucurbita moschata][more]

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi10G001435Bhi10G001435gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001435.exon1Bhi10M001435.exon1exon
Bhi10M001435.exon2Bhi10M001435.exon2exon
Bhi10M001435.exon3Bhi10M001435.exon3exon
Bhi10M001435.exon4Bhi10M001435.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi10M001435cds.Bhi10M001435CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi10M001435Bhi10M001435-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableCOILSCoilCoilcoord: 35..55