Bhi10M001356 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10M001356
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	MP domain-containing protein
Location	chr10 : 43010390 .. 43010765 (+)
Sequence length	376

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGATTGATCTACAAGATCAACAACTTCAATTTTTCTCAGACTGACGTAATTGTCATCACCGAGAAAAATCTCACAATGAAGGATGAGTTTACCGAAATCAGCCTTTTTCCAAAAGAATCTATAGAGAAAGCTATAGATAAATACAAATACCTACACATTGGATGTGTTCAAGTTACCCTTAAACCTCTATTCAGAGAAGGATTAGACGTACCAGTCTATCTTGCTCTCAGAGATAAGCGGCATCTGCGATTCTCACACTCTATTTTAGGAATCGTCCAATCAAACCTTGAAAGAGGTCCGGTTTACTTCACTTGCAAACCAGGATTTACTATCTCTTTTCAAGACGCAAATCTCCGAGATGCCTTTA

mRNA sequence

ATGGATCCAAGATTGATCTACAAGATCAACAACTTCAATTTTTCTCAGACTGACGTAATTGTCATCACCGAGAAAAATCTCACAATGAAGGATGAGTTTACCGAAATCAGCCTTTTTCCAAAAGAATCTATAGAGAAAGCTATAGATAAATACAAATACCTACACATTGGATGTGTTCAAGTTACCCTTAAACCTCTATTCAGAGAAGGATTAGACGTACCAGTCTATCTTGCTCTCAGAGATAAGCGGCATCTGCGATTCTCACACTCTATTTTAGGAATCGTCCAATCAAACCTTGAAAGAGGTCCGGTTTACTTCACTTGCAAACCAGGATTTACTATCTCTTTTCAAGACGCAAATCTCCGAGATGCCTTTA

Coding sequence (CDS)

ATGGATCCAAGATTGATCTACAAGATCAACAACTTCAATTTTTCTCAGACTGACGTAATTGTCATCACCGAGAAAAATCTCACAATGAAGGATGAGTTTACCGAAATCAGCCTTTTTCCAAAAGAATCTATAGAGAAAGCTATAGATAAATACAAATACCTACACATTGGATGTGTTCAAGTTACCCTTAAACCTCTATTCAGAGAAGGATTAGACGTACCAGTCTATCTTGCTCTCAGAGATAAGCGGCATCTGCGATTCTCACACTCTATTTTAGGAATCGTCCAATCAAACCTTGAAAGAGGTCCGGTTTACTTCACTTGCAAACCAGGATTTACTATCTCTTTTCAAGACGCAAATCTCCGAGATGCCTTTA

Protein sequence

MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQVTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANLRDAF

Homology

[Close]

BLAST of Bhi10M001356 vs. Swiss-Prot
Match: sp|Q91DM0|POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 50  KYKYLHIGCVQVTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCK 109
           ++ ++H G V++ L    R+G  V   LAL D R+L + H+ LG  +  L  G V+ T  
Sbjct: 121 QFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLF 180

Query: 110 PGFTISFQDANLRDA 125
           P FT+S  DANL  A
Sbjct: 181 PNFTMSLSDANLSTA 195

[Close]

BLAST of Bhi10M001356 vs. Swiss-Prot
Match: sp|Q6XKE6|POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) OX=492095 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 50  KYKYLHIGCVQVTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCK 109
           ++ ++H G V++ L    R+G  V   LAL D R+L + H+ LG  +  L  G V+ T  
Sbjct: 122 QFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLF 181

Query: 110 PGFTISFQDANLRDA 125
           P FT+S  DANL  A
Sbjct: 182 PNFTMSLSDANLSTA 196

[Close]

BLAST of Bhi10M001356 vs. Swiss-Prot
Match: sp|P05396|MVP_CERV (Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 34/95 (35.79%), Postives = 46/95 (48.42%), Query Frame = 0


Query: 36  ISLFPKESIEKAIDKYK---------YLHIGCVQVTLKPLFREGLDVPVYLALRDKRHLR 95
           + L  K  I+K +DK K          +H G ++V +K  FREG++ P+ +AL D R   
Sbjct: 92  LPLVTKSEIKKNLDKIKDEKVRSTISDIHFGAIKVLIKARFREGINSPIKMALIDDRITD 151

Query: 96  FSHSILGIVQSNLERGPVYFTCKPGFTISFQDANL 122
              SILG    NL  G   FT  P +T S  D  L
Sbjct: 152 RQDSILGAAHGNLVYGKFMFTVYPKYTTSILDQRL 186

[Close]

BLAST of Bhi10M001356 vs. Swiss-Prot
Match: sp|P09520|MVP_FMVD (Movement protein OS=Figwort mosaic virus (strain DxS) OX=10650 GN=ORF I PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 34/108 (31.48%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 24  EKNLTMKDEFTEI--SLFPKESIEKAI--------DKYKYLHIGCVQVTLKPLFREGLDV 83
           E ++ +KD   ++   L  K+ I++ +         K   +H+G V++ L   FR+G+D 
Sbjct: 84  EMSVDIKDVSGQVYLPLITKQEIQQKLMKIDPSVRSKISMIHLGAVKILLTAQFRQGIDT 143

Query: 84  PVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANL 122
            V +AL D R +    S+LG  + NL  G   FT  P F +S Q  NL
Sbjct: 144 SVKMALIDDRIVNRKDSLLGAARGNLAYGKFMFTVYPKFALSLQSKNL 191

[Close]

BLAST of Bhi10M001356 vs. Swiss-Prot
Match: sp|Q01089|MVP_CAMVW (Movement protein OS=Cauliflower mosaic virus (strain W260) OX=31558 GN=ORF I PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 32/94 (34.04%), Postives = 43/94 (45.74%), Query Frame = 0


Query: 36  ISLFPKESIEKAIDKYK--------YLHIGCVQVTLKPLFREGLDVPVYLALRDKRHLRF 95
           + L  KE I K +   K         +H+G V++ LK  FR G+D P+ +AL D R    
Sbjct: 101 LPLITKEEINKRLSSLKPEVRRTMSMVHLGAVKILLKAQFRNGIDTPIKIALIDDRINSR 160

Query: 96  SHSILGIVQSNLERGPVYFTCKPGFTISFQDANL 122
              +LG  + NL  G   FT  P F IS     L
Sbjct: 161 KDCLLGAAKGNLAYGKFMFTVYPKFGISLNTQRL 194

[Close]

BLAST of Bhi10M001356 vs. TrEMBL
Match: tr|A0A1S4DX30|A0A1S4DX30_CUCME (uncharacterized protein LOC107990934 OS=Cucumis melo OX=3656 GN=LOC107990934 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-43
Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           ++   +YKIN FNFSQ  VIVITE+N+ MKDE T I L PKE++ K  +K+KYLHIGCVQ
Sbjct: 28  LEANQVYKINTFNFSQQHVIVITEENVAMKDELTAIKLLPKETLFKVKEKFKYLHIGCVQ 87

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLFREGLDV VYLALRDKRHLRF+ S+LGIVQSNLE+GPVYF C+PG T+S QD N
Sbjct: 88  VALKPLFREGLDVLVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTVSLQDKN 147

Query: 121 LRD 124
           + D
Sbjct: 148 IMD 150

[Close]

BLAST of Bhi10M001356 vs. TrEMBL
Match: tr|A0A1S4DYV2|A0A1S4DYV2_CUCME (uncharacterized protein LOC107991186 OS=Cucumis melo OX=3656 GN=LOC107991186 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.6e-43
Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           +DP  +YKIN FNFSQ DVIVITE+N+ MKDEFT I+L P+E++ K  +K+KYLHIG VQ
Sbjct: 16  VDPSQVYKINTFNFSQQDVIVITEENVAMKDEFTAINLLPEETLFKVKNKFKYLHIGYVQ 75

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLF+EGLDVPVYLALRDKRHLRF+ S+LGIVQSNLE+ PVYF CK G T+S QD +
Sbjct: 76  VALKPLFKEGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQRPVYFNCKLGLTVSLQDRS 135

Query: 121 LRD 124
           + D
Sbjct: 136 IMD 138

[Close]

BLAST of Bhi10M001356 vs. TrEMBL
Match: tr|A0A0A0M024|A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-41
Identity = 80/123 (65.04%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           ++ + +Y+IN FNFSQ D+IVITE+N+ MKDEFT + L P+E++ ++ +K+KYLHI CVQ
Sbjct: 60  LEAKEVYRINTFNFSQQDMIVITEENVAMKDEFTTVKLLPEETLFRSREKFKYLHIECVQ 119

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLFREGLDV VYLALRDKRH RF+ S+LGI+QSNLERGPVYF CKP  TIS  D  
Sbjct: 120 VALKPLFREGLDVSVYLALRDKRHRRFTPSLLGIIQSNLERGPVYFNCKPNITISLHDDT 179

Query: 121 LRD 124
           + D
Sbjct: 180 IMD 182

[Close]

BLAST of Bhi10M001356 vs. TrEMBL
Match: tr|A0A151RPG4|A0A151RPG4_CAJCA (Polyprotein OS=Cajanus cajan OX=3821 GN=KK1_034056 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0


Query: 6   IYKINNFNFSQTDVIVIT-EKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQVTLK 65
           IYK++   F QTD I+ T E  + + +E  E  L  ++S+++   KY YLHIGC+QV +K
Sbjct: 53  IYKLDGRWFKQTDYIIKTAESQIPLSNEEEEFHLLDEQSLKEEAKKYNYLHIGCIQVAIK 112

Query: 66  PLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANLRDA 125
           PL  +GLD  +   LRD RHLRF+ S++G V+++L +GP++F C P  TIS +D N+ DA
Sbjct: 113 PLGIKGLDNSILCCLRDLRHLRFNQSLIGTVETSLAKGPIFFNCFPNRTISLKDRNILDA 172

[Close]

BLAST of Bhi10M001356 vs. TrEMBL
Match: tr|A0A251T9F0|A0A251T9F0_HELAN (Putative viral movement protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0333621 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-22
Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 2   DPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQV 61
           D + IY+I  F+F Q   I   E+ + +  ++  + L   E+I++    YK+LHIG VQV
Sbjct: 53  DVKTIYRIGTFDFLQDYSIKTHEQTIPINKDYQNMQLLSVEAIKRHRKLYKFLHIGLVQV 112

Query: 62  TLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANL 121
            +KP+FR G+D PV L LRD RH  F++S+L + +SN+  GP+YF C P F+I   D N+
Sbjct: 113 AIKPMFRLGIDAPVLLILRDARHTNFNNSLLAMAESNISNGPIYFNCYPNFSIGLFDPNI 172

Query: 122 RD 124
            D
Sbjct: 173 LD 174

[Close]

BLAST of Bhi10M001356 vs. NCBI nr
Match: XP_016900528.1 (PREDICTED: uncharacterized protein LOC107990934 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43
Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           ++   +YKIN FNFSQ  VIVITE+N+ MKDE T I L PKE++ K  +K+KYLHIGCVQ
Sbjct: 28  LEANQVYKINTFNFSQQHVIVITEENVAMKDELTAIKLLPKETLFKVKEKFKYLHIGCVQ 87

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLFREGLDV VYLALRDKRHLRF+ S+LGIVQSNLE+GPVYF C+PG T+S QD N
Sbjct: 88  VALKPLFREGLDVLVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTVSLQDKN 147

Query: 121 LRD 124
           + D
Sbjct: 148 IMD 150

[Close]

BLAST of Bhi10M001356 vs. NCBI nr
Match: XP_016901152.1 (PREDICTED: uncharacterized protein LOC107991186 [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 8.4e-43
Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           +DP  +YKIN FNFSQ DVIVITE+N+ MKDEFT I+L P+E++ K  +K+KYLHIG VQ
Sbjct: 16  VDPSQVYKINTFNFSQQDVIVITEENVAMKDEFTAINLLPEETLFKVKNKFKYLHIGYVQ 75

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLF+EGLDVPVYLALRDKRHLRF+ S+LGIVQSNLE+ PVYF CK G T+S QD +
Sbjct: 76  VALKPLFKEGLDVPVYLALRDKRHLRFTPSLLGIVQSNLEQRPVYFNCKLGLTVSLQDRS 135

Query: 121 LRD 124
           + D
Sbjct: 136 IMD 138

[Close]

BLAST of Bhi10M001356 vs. NCBI nr
Match: KGN65521.1 (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 7.9e-41
Identity = 80/123 (65.04%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 1   MDPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQ 60
           ++ + +Y+IN FNFSQ D+IVITE+N+ MKDEFT + L P+E++ ++ +K+KYLHI CVQ
Sbjct: 60  LEAKEVYRINTFNFSQQDMIVITEENVAMKDEFTTVKLLPEETLFRSREKFKYLHIECVQ 119

Query: 61  VTLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDAN 120
           V LKPLFREGLDV VYLALRDKRH RF+ S+LGI+QSNLERGPVYF CKP  TIS  D  
Sbjct: 120 VALKPLFREGLDVSVYLALRDKRHRRFTPSLLGIIQSNLERGPVYFNCKPNITISLHDDT 179

Query: 121 LRD 124
           + D
Sbjct: 180 IMD 182

[Close]

BLAST of Bhi10M001356 vs. NCBI nr
Match: KYP44422.1 (polyprotein [Cajanus cajan])

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 54/120 (45.00%), Postives = 80/120 (66.67%), Query Frame = 0


Query: 6   IYKINNFNFSQTDVIVIT-EKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQVTLK 65
           IYK++   F QTD I+ T E  + + +E  E  L  ++S+++   KY YLHIGC+QV +K
Sbjct: 53  IYKLDGRWFKQTDYIIKTAESQIPLSNEEEEFHLLDEQSLKEEAKKYNYLHIGCIQVAIK 112

Query: 66  PLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANLRDA 125
           PL  +GLD  +   LRD RHLRF+ S++G V+++L +GP++F C P  TIS +D N+ DA
Sbjct: 113 PLGIKGLDNSILCCLRDLRHLRFNQSLIGTVETSLAKGPIFFNCFPNRTISLKDRNILDA 172

[Close]

BLAST of Bhi10M001356 vs. NCBI nr
Match: OTG07718.1 (putative viral movement protein [Helianthus annuus])

HSP 1 Score: 113.6 bits (283), Expect = 4.8e-22
Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 2   DPRLIYKINNFNFSQTDVIVITEKNLTMKDEFTEISLFPKESIEKAIDKYKYLHIGCVQV 61
           D + IY+I  F+F Q   I   E+ + +  ++  + L   E+I++    YK+LHIG VQV
Sbjct: 53  DVKTIYRIGTFDFLQDYSIKTHEQTIPINKDYQNMQLLSVEAIKRHRKLYKFLHIGLVQV 112

Query: 62  TLKPLFREGLDVPVYLALRDKRHLRFSHSILGIVQSNLERGPVYFTCKPGFTISFQDANL 121
            +KP+FR G+D PV L LRD RH  F++S+L + +SN+  GP+YF C P F+I   D N+
Sbjct: 113 AIKPMFRLGIDAPVLLILRDARHTNFNNSLLAMAESNISNGPIYFNCYPNFSIGLFDPNI 172

Query: 122 RD 124
            D
Sbjct: 173 LD 174

The following BLAST results are available for this feature:

BLAST of Bhi10M001356 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi10M001356 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q91DM0\|POLG_PVCV1	9.2e-09	38.67	Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 P...	[more]
sp\|Q6XKE6\|POLG_PVCV2	9.2e-09	38.67	Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) OX=492095 PE=3 ...	[more]
sp\|P05396\|MVP_CERV	6.0e-08	35.79	Movement protein OS=Carnation etched ring virus OX=10640 GN=ORF I PE=3 SV=1	[more]
sp\|P09520\|MVP_FMVD	6.0e-08	31.48	Movement protein OS=Figwort mosaic virus (strain DxS) OX=10650 GN=ORF I PE=3 SV=...	[more]
sp\|Q01089\|MVP_CAMVW	3.9e-07	34.04	Movement protein OS=Cauliflower mosaic virus (strain W260) OX=31558 GN=ORF I PE=...	[more]

BLAST of Bhi10M001356 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DX30\|A0A1S4DX30_CUCME	1.5e-43	69.92	uncharacterized protein LOC107990934 OS=Cucumis melo OX=3656 GN=LOC107990934 PE=...	[more]
tr\|A0A1S4DYV2\|A0A1S4DYV2_CUCME	5.6e-43	69.92	uncharacterized protein LOC107991186 OS=Cucumis melo OX=3656 GN=LOC107991186 PE=...	[more]
tr\|A0A0A0M024\|A0A0A0M024_CUCSA	5.2e-41	65.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1	[more]
tr\|A0A151RPG4\|A0A151RPG4_CAJCA	1.1e-22	45.00	Polyprotein OS=Cajanus cajan OX=3821 GN=KK1_034056 PE=4 SV=1	[more]
tr\|A0A251T9F0\|A0A251T9F0_HELAN	3.2e-22	41.80	Putative viral movement protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g03...	[more]

BLAST of Bhi10M001356 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900528.1	2.2e-43	69.92	PREDICTED: uncharacterized protein LOC107990934 [Cucumis melo]	[more]
XP_016901152.1	8.4e-43	69.92	PREDICTED: uncharacterized protein LOC107991186 [Cucumis melo]	[more]
KGN65521.1	7.9e-41	65.04	hypothetical protein Csa_1G434190 [Cucumis sativus]	[more]
KYP44422.1	1.6e-22	45.00	polyprotein [Cajanus cajan]	[more]
OTG07718.1	4.8e-22	41.80	putative viral movement protein [Helianthus annuus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR028919	Viral_movement

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi10G001356	Bhi10G001356	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M001356.exon1	Bhi10M001356.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi10M001356	cds.Bhi10M001356	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi10M001356	Bhi10M001356-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028919	Viral movement protein	PFAM	PF01107	MP	coord: 20..124 e-value: 2.1E-21 score: 76.3