Bhi10M001268 (mRNA) Wax gourd

NameBhi10M001268
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr10 : 39663629 .. 39664149 (+)
Sequence length521
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAAATCCCTTTTTGGCTCTCCATTTTTATTGATTCTTTTTACTCTTGGAAAAATGTTCAAGGTTAGAAGCTTTGGCTTAGCACTTATTATGATTCTAATGGCTATCCCAAACTTTGCCCTTTTCGCCGATAGTCGAGTGCTTCGATCGGAGGCCGAGCAAGATGATGTTAAGAAATACGATGTCGATGAAAAGCCAAACAGCCTAACACCACAGCCGAAAGCTTCGAGCAGTAGTCGCGACCAAGTTTTTACGTTGGCATCGGGGCCAAGCAGGAAGGGCGCCGGCCATTAGTCACAAATGTTCTTCTATACCATATTGATTTGGGGAATTCGTTGCTTGGATTTATTTTTTTCTCTTTCGGATCATGTACATGACTTAGAAAATTTGTTTTCCTCTTTCTAATTTTCATTCTTTTTTGTTATTTTGATAGGTTTCACTTTGTTAGTTAATCACGAGAGACATGTATTTAATGGTCGGCTTAGGTTACTGTCTTTTCTTTGTTTTGTAAGGTTACGC

mRNA sequence

AAACAAAATCCCTTTTTGGCTCTCCATTTTTATTGATTCTTTTTACTCTTGGAAAAATGTTCAAGGTTAGAAGCTTTGGCTTAGCACTTATTATGATTCTAATGGCTATCCCAAACTTTGCCCTTTTCGCCGATAGTCGAGTGCTTCGATCGGAGGCCGAGCAAGATGATGTTAAGAAATACGATGTCGATGAAAAGCCAAACAGCCTAACACCACAGCCGAAAGCTTCGAGCAGTAGTCGCGACCAAGTTTTTACGTTGGCATCGGGGCCAAGCAGGAAGGGCGCCGGCCATTAGTCACAAATGTTCTTCTATACCATATTGATTTGGGGAATTCGTTGCTTGGATTTATTTTTTTCTCTTTCGGATCATGTACATGACTTAGAAAATTTGTTTTCCTCTTTCTAATTTTCATTCTTTTTTGTTATTTTGATAGGTTTCACTTTGTTAGTTAATCACGAGAGACATGTATTTAATGGTCGGCTTAGGTTACTGTCTTTTCTTTGTTTTGTAAGGTTACGC

Coding sequence (CDS)

ATGTTCAAGGTTAGAAGCTTTGGCTTAGCACTTATTATGATTCTAATGGCTATCCCAAACTTTGCCCTTTTCGCCGATAGTCGAGTGCTTCGATCGGAGGCCGAGCAAGATGATGTTAAGAAATACGATGTCGATGAAAAGCCAAACAGCCTAACACCACAGCCGAAAGCTTCGAGCAGTAGTCGCGACCAAGTTTTTACGTTGGCATCGGGGCCAAGCAGGAAGGGCGCCGGCCATTAG

Protein sequence

MFKVRSFGLALIMILMAIPNFALFADSRVLRSEAEQDDVKKYDVDEKPNSLTPQPKASSSSRDQVFTLASGPSRKGAGH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi10G001268Bhi10G001268gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001268.utr5p1Bhi10M001268.utr5p1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001268.exon1Bhi10M001268.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi10M001268cds.Bhi10M001268CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001268.utr3p1Bhi10M001268.utr3p1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi10M001268Bhi10M001268-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..68