Bhi09M002564 (mRNA) Wax gourd

NameBhi09M002564
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr9 : 80316562 .. 80317624 (-)
Sequence length1063
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTCATCAAAGATACATGTCAAATTGACAAGCTTATTTAATTATTAAAAAAGAAATAAAAATTTATCACGTATTTCTCATAATAACCACTTATACAAATTCAAGATATTTATACGACTTTCTCACATTTTCAAAAAGTTCATCCGTCTCTCAAATTATTATTTTTTTTCTTCAAATAATATGAGTGAACAATTAATACTAACGTCTAACACATGTTACATGTCAGTTGTGGTAGATTTAAACAAAGACATGATTGAAAAGAAAACATTAATTTTTACAAACTATTCATCAAATTCTCAAAAACTAACCCTTCAACGACAACAATCCGTCAGGTTATTGTCAGCACCATTAGAAAACAAAATGAAGCAAACACACAAACAACACAACGAACTTAGAAACATAAGAGAATGAACCCGAATTTGAGCTGTAGAAATAGTAGTAAGGGTAAGAATAATCCCGAGGCCCCACCGTCTGAGGCATCTCACCGGAAGGTCGTGAGCCCAAAATATAATTCGCAGCCGGTGGCGGCGGACCCCATAAGTAATACGATGGAGTTGCCGGCGGCGCCATATACCCACCATACAAAACTGGCGGAGGCGGGATGTAAGAGTGCGGAGGAGAAGGCGTCGTACAAACCACCGGACATGTGGCGCAGTCGCTGATGCACAGCTGTCCGGTGGAAGGGACAGCCATTTGGGCCTCGGATGACGCTGAAAATAAAGCCAATGCGACGATCCAAAGCACCAAAGAGCCAAGAATTTGCCTTGTTCCCAGAAACGGCGTCATTTTGCTATGACACATCGAGAAATTGCTGAAGAGAAAAGAAAATGGTGTGTTGGAAGAACTGAGTTAAAAGACGTGCCGGTCGGTCCTTCAATGATGTGGGCATGTGAAATGATTATGCAAAAAGGGCTTTTCTTCTACTTTTATGGGGTACGTTCTGTTATTCTTTTCGGTGGAGATTATTTATGGTAAAATCAATTGTCATCTACTATATTCAAAGAAAAGTACCTCCATTTTTATTCAATTAATATTAAAAATATACCATTCTTTTAATTTATG

mRNA sequence

CTACTCATCAAAGATACATGTCAAATTGACAAGCTTATTTAATTATTAAAAAAGAAATAAAAATTTATCACGTATTTCTCATAATAACCACTTATACAAATTCAAGATATTTATACGACTTTCTCACATTTTCAAAAAGTTCATCCGTCTCTCAAATTATTATTTTTTTTCTTCAAATAATATGAGTGAACAATTAATACTAACGTCTAACACATGTTACATGTCAGTTGTGGTAGATTTAAACAAAGACATGATTGAAAAGAAAACATTAATTTTTACAAACTATTCATCAAATTCTCAAAAACTAACCCTTCAACGACAACAATCCGTCAGGTTATTGTCAGCACCATTAGAAAACAAAATGAAGCAAACACACAAACAACACAACGAACTTAGAAACATAAGAGAATGAACCCGAATTTGAGCTGTAGAAATAGTAGTAAGGGTAAGAATAATCCCGAGGCCCCACCGTCTGAGGCATCTCACCGGAAGGTCGTGAGCCCAAAATATAATTCGCAGCCGGTGGCGGCGGACCCCATAAGTAATACGATGGAGTTGCCGGCGGCGCCATATACCCACCATACAAAACTGGCGGAGGCGGGATGTAAGAGTGCGGAGGAGAAGGCGTCGTACAAACCACCGGACATGTGGCGCAGTCGCTGATGCACAGCTGTCCGGTGGAAGGGACAGCCATTTGGGCCTCGGATGACGCTGAAAATAAAGCCAATGCGACGATCCAAAGCACCAAAGAGCCAAGAATTTGCCTTGTTCCCAGAAACGGCGTCATTTTGCTATGACACATCGAGAAATTGCTGAAGAGAAAAGAAAATGGTGTGTTGGAAGAACTGAGTTAAAAGACGTGCCGGTCGGTCCTTCAATGATGTGGGCATGTGAAATGATTATGCAAAAAGGGCTTTTCTTCTACTTTTATGGGGTACGTTCTGTTATTCTTTTCGGTGGAGATTATTTATGGTAAAATCAATTGTCATCTACTATATTCAAAGAAAAGTACCTCCATTTTTATTCAATTAATATTAAAAATATACCATTCTTTTAATTTATG

Coding sequence (CDS)

ATGAACCCGAATTTGAGCTGTAGAAATAGTAGTAAGGGTAAGAATAATCCCGAGGCCCCACCGTCTGAGGCATCTCACCGGAAGGTCGTGAGCCCAAAATATAATTCGCAGCCGGTGGCGGCGGACCCCATAAGTAATACGATGGAGTTGCCGGCGGCGCCATATACCCACCATACAAAACTGGCGGAGGCGGGATGTAAGAGTGCGGAGGAGAAGGCGTCGTACAAACCACCGGACATGTGGCGCAGTCGCTGA

Protein sequence

MNPNLSCRNSSKGKNNPEAPPSEASHRKVVSPKYNSQPVAADPISNTMELPAAPYTHHTKLAEAGCKSAEEKASYKPPDMWRSR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi09G002564Bhi09G002564gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi09M002564.utr3p1Bhi09M002564.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi09M002564cds.Bhi09M002564CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi09M002564.exon1Bhi09M002564.exon1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi09M002564.utr5p1Bhi09M002564.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi09M002564Bhi09M002564-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..84