Bhi09M001561 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi09M001561
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	NAD(P)H-quinone oxidoreductase subunit M like
Location	chr9 : 51270134 .. 51273318 (-)
Sequence length	1648

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAACCAGAAAAATCTTATCCACAAACAATTGGATCTCATTTCATTTGAAAAAAAAAAACCGAAAGTATAAAACAAAGAAACCAAAACCAACCATATTTTCCAAAGATAGAAATCCTCAATGGCAACAGCTTCATCTTACATGGTGTTTCCTATGGTGGGTTGGAAAAACAGCAAACAAAACACAAAACCCAAACCCAAATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAATTTGGGAGACCAACAAAAAGAAGAACAGGGGAAGCCAAAACCGTCGCCGTTGCGGCCGGTCGAAGCACAGCAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTATATTGATCCTGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTTATTTTGGATCCAAGTAATGAATTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTACTTTTTTTTTCTTTCTTTGTTTACATCATGGGTTAGTTTAGTGGTTTTTCGAAAACAGTTTGTGTTCGATTTTGAAATTGTTGTTGCATCAAATCAGTGTAGTTGTTAGTAAAATTGGGATGGCTGATACTATACTAATTGAATGTAAAGATTTAAAAAAAGGGTTACTGTACTTTTATTGATTGTTGTTTGTCTACATACAAAGGTGTGTGTGTTTCAATTGACAAAACTACAATTGAAGTGCACAACTCATTTGGCATTGGAATTTTGTAAACTTTTTATATTCCAAGTAAGTAGCAATTGTAGGATGAATTTACCATAAGATCATATATGCATGATATTCTCTCTTTTATTTCTTAGGCATCATTTGTTAGTTTTTTTTTTTTTTTTTAATTAAATCTATTTCCTCTCAGTTTCATATAATGATTTTCATCTTCTTTAAGTAAAAGTTGATTTTTAAAATTTTGGTAGAAAGTAGATAACAAAGTAAGACATTTAGAAGTGGAAGTAATTTTTATAGACTTAATTTTCAAAAACTAAAAATAAAATTGAATAATTACCAAACAGGACATTAATGAATTTTGGACTAGTCGATGAATTTGAAGACAAATATTCAATCAATATCCAAGAAGATCAAACAAATTTTCCATTAAACTGAGAGACATAGAAACTTATTTATTTATTATTATTTTTAAATGCTAAATACAAAAGGTATCCTAATTCTTCTTTTTGTTTAAGACATACCTCTATTCTTTTAAAATTTGCAATATTACTCAGATTTTTCTTAAATATTTCAAAGCTATCTTTGAAGTAAAATTTTGTTAGTATACCAGGGGGAAATTGAGATCTATAACAGTACAATTTGACTTGGAATAGAAATTGGGAGTTCAATACCCGAGTCATCAGTCCACCTGCTTTAGGTCCCAATTTCCATCTAGAATCTAAGATTCTACTCCAATGATAGTTTTGAAACACTCATGTAGATCAAGTGCAAAGATTCTACTCTAATGATGGTTTTGAAACACTCAGGAAGATCAAGGGCAAGTTCCTGGATATATTTTTTGATATTTAGCCCAAAAATAAATAAATAAATAAATAAAACATAAGCATTAGGGAAAATTGATGCATCATCTCCTTTGATATTTATACTAAAAATGAAATTTAAAATATTACTTTAATCCTTGTATTTTGGAACTTGTTCAATTTTAAAATGTCTACTTTTAGTCTCAATATTTTCAATAAATCATAAATTCAGTCATTCATAGTTAGCAACTAAATTTGAACCATATTGTAAGTACAAGAATCAAAATGATACTTTAACCAAAAAGGAAAACGACTCTTATAGAACGCTTCTCCATTCTTAGAACTTAGAACTGTGAAGTTTCTCTTTTCCTTTGAGAAAGCGGAGAGTTAAATGAGAAATTCCATATTGTTTTTGCTATAAAGAATTTGTAAAAAGATAGGTTATTAGAGGTAGAATACTATGCTCTTTAACAAATATTTTGATCGAGTGTGTTTCATTTGTGGAAAGCAGGGAGCTCCATTGACAGAATATACACTTCGACTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAATTACTCTTTACAAATGTAATCATATGTGAAATATTCAAATCAATGTGTTGGTCTTCCAAATAATGGAAACCATAATTCTTCACCTTATACTTATCATTCCCTTCCCTGTCTCATTTTGATGCTTCATCAATGCATAATCCCTGTAAATGTAGTTTCATACCTTCAAAACCTACTACATTAGGGAGAAAAAAAGAAAACAAAAGGACATTCCACATGCCCAAAGAACTGTCCAATTCCAAACAAAGAGTTATGCAAGATAATCATTACCTTTTAGTGATGTCTTTAAACTTTGGAATACCAAATTGAAACTTTTAGCCATTTGAGACAGAGTGAAGTTTAGTCTGAAGAGTTATTTAATGTGTATTTAGAATGTGGAGTTATTTAGTCTGGAGTTTTGAAGTTTGTGTTTAGAGAGAAGAGTTGTTTAACTTGGAGTTAATTAAGAAGACTATGTCTAGAGTGTAAAGTTGCTTAACCTGGAGTCGAGGTGATAGTTTGTCCTCCTTCAATTCACTGTTTCATAATCGAAATCTTGGTTCATTTCCTGTCACTTGTATTCAAATGAAATCTTTCAAATCATAGGGAAACACATAAAATAAAAAGGAAAGATGCAATGCTACACTTTGGCAGAAGGAATGTGTTTCTTCTACACTTCAATGACATGGGCTCATGCTAGAAAGAGGAATAATTTAATGGATAACACCTACTAATTCCTCCTACCATAATTACAAAAACATGAAACCCACGACCACCAAAATACATTCGGAATACCATTTTCTCTTGGATTCATTCGTCTGCATATAAAGTGAAACGAGTGCCAAATTGAGCTAAACTTCCAAGTTATGACTGTGGCAACACATCCAAGCATGATGGGTCCATCCAAGGCCGAAACGCATCCTCATGTGATAAAT

mRNA sequence

AACAAAACCAGAAAAATCTTATCCACAAACAATTGGATCTCATTTCATTTGAAAAAAAAAAACCGAAAGTATAAAACAAAGAAACCAAAACCAACCATATTTTCCAAAGATAGAAATCCTCAATGGCAACAGCTTCATCTTACATGGTGTTTCCTATGGTGGGTTGGAAAAACAGCAAACAAAACACAAAACCCAAACCCAAATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAATTTGGGAGACCAACAAAAAGAAGAACAGGGGAAGCCAAAACCGTCGCCGTTGCGGCCGGTCGAAGCACAGCAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTATATTGATCCTGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTTATTTTGGATCCAAGTAATGAATTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGACTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAATTACTCTTTACAAATGTAATCATATGTGAAATATTCAAATCAATGTGTTGGTCTTCCAAATAATGGAAACCATAATTCTTCACCTTATACTTATCATTCCCTTCCCTGTCTCATTTTGATGCTTCATCAATGCATAATCCCTGTAAATGTAGTTTCATACCTTCAAAACCTACTACATTAGGGAGAAAAAAAGAAAACAAAAGGACATTCCACATGCCCAAAGAACTGTCCAATTCCAAACAAAGAGTTATGCAAGATAATCATTACCTTTTAGTGATGTCTTTAAACTTTGGAATACCAAATTGAAACTTTTAGCCATTTGAGACAGAGTGAAGTTTAGTCTGAAGAGTTATTTAATGTGTATTTAGAATGTGGAGTTATTTAGTCTGGAGTTTTGAAGTTTGTGTTTAGAGAGAAGAGTTGTTTAACTTGGAGTTAATTAAGAAGACTATGTCTAGAGTGTAAAGTTGCTTAACCTGGAGTCGAGGTGATAGTTTGTCCTCCTTCAATTCACTGTTTCATAATCGAAATCTTGGTTCATTTCCTGTCACTTGTATTCAAATGAAATCTTTCAAATCATAGGGAAACACATAAAATAAAAAGGAAAGATGCAATGCTACACTTTGGCAGAAGGAATGTGTTTCTTCTACACTTCAATGACATGGGCTCATGCTAGAAAGAGGAATAATTTAATGGATAACACCTACTAATTCCTCCTACCATAATTACAAAAACATGAAACCCACGACCACCAAAATACATTCGGAATACCATTTTCTCTTGGATTCATTCGTCTGCATATAAAGTGAAACGAGTGCCAAATTGAGCTAAACTTCCAAGTTATGACTGTGGCAACACATCCAAGCATGATGGGTCCATCCAAGGCCGAAACGCATCCTCATGTGATAAAT

Coding sequence (CDS)

ATGGCAACAGCTTCATCTTACATGGTGTTTCCTATGGTGGGTTGGAAAAACAGCAAACAAAACACAAAACCCAAACCCAAATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAATTTGGGAGACCAACAAAAAGAAGAACAGGGGAAGCCAAAACCGTCGCCGTTGCGGCCGGTCGAAGCACAGCAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTATATTGATCCTGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTTATTTTGGATCCAAGTAATGAATTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGACTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGAGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTGCCTCAGGATCTACAATCACAATAA

Protein sequence

MATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDLQSQ

Homology

[Close]

BLAST of Bhi09M001561 vs. Swiss-Prot
Match: sp|A9PJQ8|NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-72
Identity = 139/207 (67.15%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 1   MATASSYMV---FPMVGWKNSKQNTKPKPKFPISAQIN---EAAEQLNLGDQQKEEQGKP 60
           MA +SSYM    F M+GW   ++  K +    +S Q     + ++++N     K +Q   
Sbjct: 1   MAASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNXXXXXKVKQ--- 60

Query: 61  KPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLI 120
            P   RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLI
Sbjct: 61  -PVQPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLI 120

Query: 121 LDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKY 180
           LDP++EF+W  +TC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKY
Sbjct: 121 LDPTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKY 180

Query: 181 NMNARVLNFSMGKPRIMFNANDLPQDL 202
           NMNARVLNFSMGKPRI+FN +   QD+
Sbjct: 181 NMNARVLNFSMGKPRILFNNDGQLQDV 203

[Close]

BLAST of Bhi09M001561 vs. Swiss-Prot
Match: sp|A7NVJ4|NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-72
Identity = 143/209 (68.42%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MATASSYMV---FPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKPS 60
           MA  SSY     F M+GW   K+  + +  F ISAQ                        
Sbjct: 1   MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  PL----RPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120
                 RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL
Sbjct: 61  XXXXLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120

Query: 121 ILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIK 180
           ILDP+NEF+W  +TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIK
Sbjct: 121 ILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIK 180

Query: 181 YNMNARVLNFSMGKPRIMFNANDLPQDLQ 203
           YNMNARVLNFSMGKPRI+FN + LPQ++Q
Sbjct: 181 YNMNARVLNFSMGKPRILFN-DGLPQNVQ 208

[Close]

BLAST of Bhi09M001561 vs. Swiss-Prot
Match: sp|Q2V2S7|NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-67
Identity = 121/162 (74.69%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 36  EAAEQLNLGDQQKEEQGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAY 95
           E  E   L ++Q  E+ K +P+PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAY
Sbjct: 45  EVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAY 104

Query: 96  IDPVTCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLI 155
           IDP TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLI
Sbjct: 105 IDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLI 164

Query: 156 GSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL 198
           GSD+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++
Sbjct: 165 GSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

[Close]

BLAST of Bhi09M001561 vs. Swiss-Prot
Match: sp|A2XVZ1|NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.7e-57
Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 51  QGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDK 110
           QG  +P P++P+      +SKNM REYGGQWLS  TRH+RIYAAYI+P T  FDQTQMDK
Sbjct: 75  QGPAQPLPVQPL-----AESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDK 134

Query: 111 LTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDG 170
           LTL+LDP++EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDG
Sbjct: 135 LTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDG 194

Query: 171 EIKYNMNARVLNFSMGKPRIMFNANDLP 199
           EIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 195 EIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of Bhi09M001561 vs. Swiss-Prot
Match: sp|Q7FB12|NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.7e-57
Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 51  QGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDK 110
           QG  +P P++P+      +SKNM REYGGQWLS  TRH+RIYAAYI+P T  FDQTQMDK
Sbjct: 75  QGPAQPLPVQPL-----AESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDK 134

Query: 111 LTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDG 170
           LTL+LDP++EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDG
Sbjct: 135 LTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDG 194

Query: 171 EIKYNMNARVLNFSMGKPRIMFNANDLP 199
           EIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 195 EIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of Bhi09M001561 vs. TAIR10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex)

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-68
Identity = 121/162 (74.69%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 36  EAAEQLNLGDQQKEEQGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAY 95
           E  E   L ++Q  E+ K +P+PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAY
Sbjct: 45  EVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAY 104

Query: 96  IDPVTCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLI 155
           IDP TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLI
Sbjct: 105 IDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLI 164

Query: 156 GSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL 198
           GSD+EHYIRKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++
Sbjct: 165 GSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

[Close]

BLAST of Bhi09M001561 vs. TrEMBL
Match: tr|A0A1S3BGV5|A0A1S3BGV5_CUCME (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489705 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.1e-100
Identity = 184/205 (89.76%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQK-EEQGKPKPSPLR 61
           A ASSY++F MVGWKN KQNTK   +FPISAQ+NEAAEQL +GDQ++ +EQ  PKPSPLR
Sbjct: 5   AAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPLR 64

Query: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE
Sbjct: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 124

Query: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV
Sbjct: 125 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 184

Query: 182 LNFSMGKPRIMFNANDLPQ-DLQSQ 205
           LNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 185 LNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of Bhi09M001561 vs. TrEMBL
Match: tr|A0A0A0K5H1|A0A0A0K5H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 9.6e-93
Identity = 174/205 (84.88%), Postives = 183/205 (89.27%), Query Frame = 0


Query: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQK-EEQGKPKPSPLR 61
           A ASSY++F MVGWKN  QNTK   +FPISAQINEAAEQL  GDQ++           LR
Sbjct: 5   AAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEXXXXXXXXXXXLR 64

Query: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSNE
Sbjct: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNE 124

Query: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV
Sbjct: 125 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 184

Query: 182 LNFSMGKPRIMFNANDLPQ-DLQSQ 205
           LNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 185 LNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of Bhi09M001561 vs. TrEMBL
Match: tr|A0A2N9G9Z3|A0A2N9G9Z3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24167 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.4e-73
Identity = 144/212 (67.92%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 1   MATASSYMV---FPMVGWKNSKQNTKPKPKFPISAQINEA-------AEQLNLGDQQKEE 60
           MA  SSYM    F M GW   K+  + +  F ISAQ  +A                    
Sbjct: 1   MAAISSYMACTKFSMSGWIGGKREMRKRNPFSISAQQQQAXXXXXXXXXXXXXXXXXXXX 60

Query: 61  QGKPKPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDK 120
               + +PLRPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDK
Sbjct: 61  XXXQQGTPLRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDK 120

Query: 121 LTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDG 180
           LTLILDP+ EF+WN +TCNKVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+L+DG
Sbjct: 121 LTLILDPTEEFVWNSETCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLFDG 180

Query: 181 EIKYNMNARVLNFSMGKPRIMFNANDLPQDLQ 203
           EIKYNMNARVLNFSMGKPR++FN +  PQD+Q
Sbjct: 181 EIKYNMNARVLNFSMGKPRVLFNHDGQPQDVQ 212

[Close]

BLAST of Bhi09M001561 vs. TrEMBL
Match: tr|A0A2P4IH00|A0A2P4IH00_QUESU (Nad(P)h-quinone oxidoreductase subunit m, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_13862 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.5e-72
Identity = 142/210 (67.62%), Postives = 159/210 (75.71%), Query Frame = 0


Query: 1   MATASSYMV---FPMVGWKNSKQNTKPKPKFPISAQ---INEAAEQLNLGDQQKEEQGKP 60
           MA  SSYM    FPM+G    K+  + +  F ISAQ                        
Sbjct: 1   MAAISSYMACTKFPMLGRIGGKREMRKRSTFTISAQQXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  KPSPLRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLI 120
             +PLRPVEAQ NVKSKNMGREYGGQWLSS TRHVRIYAAYIDP TC FDQTQMDKLTLI
Sbjct: 61  XTTPLRPVEAQVNVKSKNMGREYGGQWLSSATRHVRIYAAYIDPETCAFDQTQMDKLTLI 120

Query: 121 LDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKY 180
           LDP++EF+WNP+TCNKVY+YFQELVDHYEG+PLTEYTLRLIGSDIEHYIRK+L+DGEIKY
Sbjct: 121 LDPTDEFVWNPETCNKVYSYFQELVDHYEGSPLTEYTLRLIGSDIEHYIRKLLFDGEIKY 180

Query: 181 NMNARVLNFSMGKPRIMFNANDLPQDLQSQ 205
           NMNA+VLNFSMGKPR+ FN +  PQD+Q Q
Sbjct: 181 NMNAQVLNFSMGKPRVQFNHDGQPQDVQPQ 210

[Close]

BLAST of Bhi09M001561 vs. TrEMBL
Match: tr|C9EIN8|C9EIN8_OLEEU (Putative NADH dehydrogenase OS=Olea europaea OX=4146 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.1e-72
Identity = 135/196 (68.88%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKP-KPSPLR 61
           +T  +   F M+GW++SK   + K  F +S+Q+ +  EQ+   +  KE+  K    +PLR
Sbjct: 5   STCMASTTFSMLGWRSSKSEVRKKSVFSVSSQLAKIEEQVKTVEATKEKDTKQHATTPLR 64

Query: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121
           P+E Q NVKSKNMGREYGGQWLSS T HVRIYAAYIDP TCEF QTQMDKLTLILDP++E
Sbjct: 65  PIEPQVNVKSKNMGREYGGQWLSSATIHVRIYAAYIDPETCEFAQTQMDKLTLILDPTDE 124

Query: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181
           F+W  +TCNKVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LY+GEI+YNMNAR+
Sbjct: 125 FVWTDETCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYEGEIQYNMNARM 184

Query: 182 LNFSMGKPRIMFNAND 197
           LNFSMGKPRI FN ND
Sbjct: 185 LNFSMGKPRIGFNYND 200

[Close]

BLAST of Bhi09M001561 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 3.2e-100
Identity = 184/205 (89.76%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQK-EEQGKPKPSPLR 61
           A ASSY++F MVGWKN KQNTK   +FPISAQ+NEAAEQL +GDQ++ +EQ  PKPSPLR
Sbjct: 5   AAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPLR 64

Query: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE
Sbjct: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 124

Query: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV
Sbjct: 125 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 184

Query: 182 LNFSMGKPRIMFNANDLPQ-DLQSQ 205
           LNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 185 LNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of Bhi09M001561 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 7.9e-99
Identity = 181/202 (89.60%), Postives = 188/202 (93.07%), Query Frame = 0


Query: 4   ASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKP--SPLRP 63
           ASSYMVF MVGWKN KQNT+P  +FPISAQINEAAEQL +G+   EE+ KPKP  SPLRP
Sbjct: 5   ASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGE---EEEAKPKPPLSPLRP 64

Query: 64  VEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 123
           VE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF
Sbjct: 65  VETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 124

Query: 124 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 183
           LWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL
Sbjct: 125 LWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 184

Query: 184 NFSMGKPRIMFNANDLPQDLQS 204
           NFSMGKPRIMFN+NDLPQDLQS
Sbjct: 185 NFSMGKPRIMFNSNDLPQDLQS 203

[Close]

BLAST of Bhi09M001561 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 3.1e-95
Identity = 176/204 (86.27%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MAT-ASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSPL 60
           MAT ASSYMVF MVGWKN KQNT+P  +FPISAQINEAAEQL +G++            L
Sbjct: 1   MATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEXXXXXXXXXXXXL 60

Query: 61  RPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 61  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 120

Query: 121 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180
           EFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 121 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 180

Query: 181 VLNFSMGKPRIMFNANDLPQDLQS 204
           VLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 VLNFSMGKPRIMFNSNDLPQDLQS 204

[Close]

BLAST of Bhi09M001561 vs. NCBI nr
Match: XP_004139803.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_7G221360 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 1.4e-92
Identity = 174/205 (84.88%), Postives = 183/205 (89.27%), Query Frame = 0


Query: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQK-EEQGKPKPSPLR 61
           A ASSY++F MVGWKN  QNTK   +FPISAQINEAAEQL  GDQ++           LR
Sbjct: 5   AAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEXXXXXXXXXXXLR 64

Query: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LDPSNE
Sbjct: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNE 124

Query: 122 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 181
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV
Sbjct: 125 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 184

Query: 182 LNFSMGKPRIMFNANDLPQ-DLQSQ 205
           LNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 185 LNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of Bhi09M001561 vs. NCBI nr
Match: XP_022139618.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia])

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87
Identity = 166/204 (81.37%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MATASSYMVFPMVGWKNSKQNTKP--KPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSP 60
           MA ASSYMV PMVGW+  K ++KP  + + PISAQ NEAAEQL +G  + E         
Sbjct: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVG--ENEXXXXXXXXX 60

Query: 61  LRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 120
            RPVE QQNVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 61  XRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 120

Query: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180
           NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180

Query: 181 RVLNFSMGKPRIMFNANDLPQDLQ 203
           +VLNFSMGKPRIMFN NDLPQ  Q
Sbjct: 181 KVLNFSMGKPRIMFNNNDLPQPNQ 202

The following BLAST results are available for this feature:

BLAST of Bhi09M001561 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A9PJQ8\|NDHM_POPJC	5.6e-72	67.15	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
sp\|A7NVJ4\|NDHM_VITVI	5.6e-72	68.42	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
sp\|Q2V2S7\|NDHM_ARATH	1.9e-67	74.69	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
sp\|A2XVZ1\|NDHM_ORYSI	8.7e-57	69.59	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
sp\|Q7FB12\|NDHM_ORYSJ	8.7e-57	69.59	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of Bhi09M001561 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37925.1	1.0e-68	74.69	subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex	[more]

BLAST of Bhi09M001561 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGV5\|A0A1S3BGV5_CUCME	2.1e-100	89.76	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0K5H1\|A0A0A0K5H1_CUCSA	9.6e-93	84.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=4 SV=1	[more]
tr\|A0A2N9G9Z3\|A0A2N9G9Z3_FAGSY	8.4e-73	67.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24167 PE=4 SV=1	[more]
tr\|A0A2P4IH00\|A0A2P4IH00_QUESU	5.5e-72	67.62	Nad(P)h-quinone oxidoreductase subunit m, chloroplastic OS=Quercus suber OX=5833...	[more]
tr\|C9EIN8\|C9EIN8_OLEEU	7.1e-72	68.88	Putative NADH dehydrogenase OS=Olea europaea OX=4146 PE=2 SV=1	[more]

BLAST of Bhi09M001561 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447195.1	3.2e-100	89.76	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo...	[more]
XP_022981611.1	7.9e-99	89.60	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima]	[more]
XP_022940621.1	3.1e-95	86.27	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
XP_004139803.1	1.4e-92	84.88	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sati...	[more]
XP_022139618.1	1.8e-87	81.37	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR018922	NdhM

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi09G001561	Bhi09G001561	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi09M001561.utr3p1	Bhi09M001561.utr3p1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi09M001561.exon2	Bhi09M001561.exon2	exon
Bhi09M001561.exon1	Bhi09M001561.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi09M001561	cds.Bhi09M001561	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi09M001561.utr5p1	Bhi09M001561.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi09M001561	Bhi09M001561-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 82..190 e-value: 3.5E-45 score: 152.6
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	FAMILY NOT NAMED	coord: 1..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..69