Bhi08M000541 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGGTGCTCGTGGATCTTCTTGTTGTTGTCGGCATTCAAATTGACGATGACGAGAGTCTTCTGCACATCCTTAATGGCTTACCAATCGAGTTCAACACATTTCGCACCTCTATCCGAATGCGCAATACCACCCTGCTAATTGTAGAACTTGAGGTTTTTCTTGACATCGAATCCAAAGCAATCGACACTTCACATTCACCAGCGAAACTTACACCGACTGCCATGGCCACATTTCAACATCTTGGTCGTGGATCTTCCTTCACTAGTGGTAGCAATCATGGGTCGCCTAGAGGAAATCACCATGGGGGTCGTGGGAGAGGAAGGAATGGAAGAGGCTTCTTCCAAAATCAATCTCAAAACCCTAACCTCTC ATGGTGAAGGTGCTCGTGGATCTTCTTGTTGTTGTCGGCATTCAAATTGACGATGACGAGAGTCTTCTGCACATCCTTAATGGCTTACCAATCGAGTTCAACACATTTCGCACCTCTATCCGAATGCGCAATACCACCCTGCTAATTGTAGAACTTGAGGTTTTTCTTGACATCGAATCCAAAGCAATCGACACTTCACATTCACCAGCGAAACTTACACCGACTGCCATGGCCACATTTCAACATCTTGGTCGTGGATCTTCCTTCACTAGTGGTAGCAATCATGGGTCGCCTAGAGGAAATCACCATGGGGGTCGTGGGAGAGGAAGGAATGGAAGAGGCTTCTTCCAAAATCAATCTCAAAACCCTAACCTCTC ATGGTGAAGGTGCTCGTGGATCTTCTTGTTGTTGTCGGCATTCAAATTGACGATGACGAGAGTCTTCTGCACATCCTTAATGGCTTACCAATCGAGTTCAACACATTTCGCACCTCTATCCGAATGCGCAATACCACCCTGCTAATTGTAGAACTTGAGGTTTTTCTTGACATCGAATCCAAAGCAATCGACACTTCACATTCACCAGCGAAACTTACACCGACTGCCATGGCCACATTTCAACATCTTGGTCGTGGATCTTCCTTCACTAGTGGTAGCAATCATGGGTCGCCTAGAGGAAATCACCATGGGGGTCGTGGGAGAGGAAGGAATGGAAGAGGCTTCTTCCAAAATCAATCTCAAAACCCTAACCTCTC MVKVLVDLLVVVGIQIDDDESLLHILNGLPIEFNTFRTSIRMRNTTLLIVELEVFLDIESKAIDTSHSPAKLTPTAMATFQHLGRGSSFTSGSNHGSPRGNHHGGRGRGRNGRGFFQNQSQNPNL
BLAST of Bhi08M000541 vs. TrEMBL
Match: tr|A0A1S4E394|A0A1S4E394_CUCME (uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 9.9e-08 Identity = 44/99 (44.44%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of Bhi08M000541 vs. TrEMBL
Match: tr|E5GBM9|E5GBM9_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07 Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Bhi08M000541 vs. TrEMBL
Match: tr|A0A1S4E4S1|A0A1S4E4S1_CUCME (uncharacterized protein LOC107991968 OS=Cucumis melo OX=3656 GN=LOC107991968 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of Bhi08M000541 vs. TrEMBL
Match: tr|A0A2N9I7A1|A0A2N9I7A1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48170 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.6e-04 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 0
BLAST of Bhi08M000541 vs. NCBI nr
Match: XP_016902697.1 (PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo]) HSP 1 Score: 65.5 bits (158), Expect = 1.5e-07 Identity = 44/99 (44.44%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of Bhi08M000541 vs. NCBI nr
Match: ADN33871.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 63.5 bits (153), Expect = 5.7e-07 Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Bhi08M000541 vs. NCBI nr
Match: XP_022158378.1 (uncharacterized protein LOC111024876 [Momordica charantia]) HSP 1 Score: 56.6 bits (135), Expect = 7.0e-05 Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Bhi08M000541 vs. NCBI nr
Match: XP_016902970.1 (PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo]) HSP 1 Score: 53.9 bits (128), Expect = 4.5e-04 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of Bhi08M000541 vs. NCBI nr
Match: XP_023922287.1 (uncharacterized protein LOC112033743 [Quercus suber]) HSP 1 Score: 53.5 bits (127), Expect = 5.9e-04 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
|