Bhi08M000465 (mRNA) Wax gourd

Overview
NameBhi08M000465
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionATP synthase subunit beta
Locationchr8 : 18644912 .. 18645277 (+)
Sequence length366
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

mRNA sequence

ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

Coding sequence (CDS)

ATGCCTGTCTACCCCTATGAGGAAAGCCAGGAAACAGGAATTAAAGTAGAAGATCTTTTAGCCCCTTATCGACGTGGAGGAAAAATAGGACTATTCGGAGGGGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATTCGTATTTGGAGGAGTAGATGAACGTACTCGTTCAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAAGAAAATCTTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACTGTGGGGAGCTCGTATGAGAGTTGGTTCAACTGCCCTAACTATGGCGGAATATTTCTAA

Protein sequence

MPVYPYEESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSGNDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF
Homology
[Close]
BLAST of Bhi08M000465 vs. Swiss-Prot
Match: sp|Q8S8W8|ATPB_ATRBE (ATP synthase subunit beta, chloroplastic OS=Atropa belladonna OX=33113 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. Swiss-Prot
Match: sp|Q9MRR9|ATPB_BRASC (ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. Swiss-Prot
Match: sp|Q8MBM4|ATPB_CALSE (ATP synthase subunit beta, chloroplastic OS=Calystegia sepium OX=47519 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 148 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 207

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 208 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 258

[Close]
BLAST of Bhi08M000465 vs. Swiss-Prot
Match: sp|Q9MRM0|ATPB_CANWI (ATP synthase subunit beta, chloroplastic OS=Canella winterana OX=3426 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. Swiss-Prot
Match: sp|A6MMC9|ATPB_CHLSC (ATP synthase subunit beta, chloroplastic OS=Chloranthus spicatus OX=13006 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 7.2e-51
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. TAIR10
Match: ATCG00480.1 (ATP synthase subunit beta)

HSP 1 Score: 200.7 bits (509), Expect = 5.2e-52
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINE+NLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. TAIR10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein)

HSP 1 Score: 166.8 bits (421), Expect = 8.4e-42
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0 

Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 205 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 264

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 265 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320

[Close]
BLAST of Bhi08M000465 vs. TAIR10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein)

HSP 1 Score: 166.8 bits (421), Expect = 8.4e-42
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0 

Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 208 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 267

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 268 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 323

[Close]
BLAST of Bhi08M000465 vs. TAIR10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein)

HSP 1 Score: 166.8 bits (421), Expect = 8.4e-42
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0 

Query: 7   EESQETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDER 66
           +E   TGIKV DLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAHGG  VF GV ER
Sbjct: 205 QEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 264

Query: 67  TRSGNDLYMEMKESGVIN-EENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           TR GNDLY EM ESGVI   E  +ESK ALVYGQMNE  GAR RVG T LT+AEYF
Sbjct: 265 TREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 320

[Close]
BLAST of Bhi08M000465 vs. TrEMBL
Match: tr|A0A0H3VNB1|A0A0H3VNB1_9LILI (ATP synthase subunit beta, chloroplastic OS=Drymophloeus litigiosus OX=145687 GN=atpB PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.6e-49
Identity = 103/111 (92.79%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 153 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 212

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINE+N+AESKVALVYGQMNEL GARMRVG TALTMAEYF
Sbjct: 213 NDLYMEMKESGVINEKNIAESKVALVYGQMNELPGARMRVGLTALTMAEYF 263

[Close]
BLAST of Bhi08M000465 vs. TrEMBL
Match: tr|A0A142DPV3|A0A142DPV3_9LAMI (ATP synthase subunit beta, chloroplastic OS=Phyllostegia velutina OX=141782 GN=atpB PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.6e-49
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPXGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. TrEMBL
Match: tr|B3XY57|B3XY57_MELLF (ATP synthase subunit beta (Fragment) OS=Melicytus latifolius OX=212268 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 142 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 201

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 202 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

[Close]
BLAST of Bhi08M000465 vs. TrEMBL
Match: tr|Q9MRG9|Q9MRG9_9ROSI (ATP synthase subunit beta (Fragment) OS=Melicytus alpinus OX=72460 GN=atpB PE=3 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 8.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 142 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 201

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 202 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

[Close]
BLAST of Bhi08M000465 vs. TrEMBL
Match: tr|B3XY59|B3XY59_9ROSI (ATP synthase subunit beta (Fragment) OS=Melicytus novae-zelandiae OX=450840 GN=atpB PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 142 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 201

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 202 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

[Close]
BLAST of Bhi08M000465 vs. NCBI nr
Match: AKF01380.1 (ATP synthase CF1 beta subunit (chloroplast) [Drymophloeus litigiosus])

HSP 1 Score: 202.2 bits (513), Expect = 9.9e-49
Identity = 103/111 (92.79%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 153 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 212

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINE+N+AESKVALVYGQMNEL GARMRVG TALTMAEYF
Sbjct: 213 NDLYMEMKESGVINEKNIAESKVALVYGQMNELPGARMRVGLTALTMAEYF 263

[Close]
BLAST of Bhi08M000465 vs. NCBI nr
Match: YP_009242334.1 (ATP synthase CF1 beta subunit (chloroplast) [Phyllostegia velutina] >AMQ33219.1 ATP synthase CF1 beta subunit (chloroplast) [Phyllostegia velutina])

HSP 1 Score: 202.2 bits (513), Expect = 9.9e-49
Identity = 103/111 (92.79%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEEN+AESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENIAESKVALVYGQMNEPXGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. NCBI nr
Match: AAG43923.1 (ATP synthase beta subunit, partial (chloroplast) [Theophrasta americana])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 150 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 209

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 210 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 260

[Close]
BLAST of Bhi08M000465 vs. NCBI nr
Match: CAB90089.2 (ATP synthase beta subunit, partial (chloroplast) [Melicytus alpinus])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 142 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 201

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 202 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

[Close]
BLAST of Bhi08M000465 vs. NCBI nr
Match: AGL73031.1 (ATP synthase beta subunit, partial (chloroplast) [Commelina communis])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 11  ETGIKVEDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVFVFGGVDERTRSG 70
           ETGIKV DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV VFGGV ERTR G
Sbjct: 142 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 201

Query: 71  NDLYMEMKESGVINEENLAESKVALVYGQMNELWGARMRVGSTALTMAEYF 122
           NDLYMEMKESGVINEENLAESKVALVYGQMNE  GARMRVG TALTMAEYF
Sbjct: 202 NDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

The following BLAST results are available for this feature:
BLAST of Bhi08M000465 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8S8W8|ATPB_ATRBE7.2e-5192.79ATP synthase subunit beta, chloroplastic OS=Atropa belladonna OX=33113 GN=atpB P... [more]
sp|Q9MRR9|ATPB_BRASC7.2e-5192.79ATP synthase subunit beta, chloroplastic OS=Brasenia schreberi OX=4424 GN=atpB P... [more]
sp|Q8MBM4|ATPB_CALSE7.2e-5192.79ATP synthase subunit beta, chloroplastic OS=Calystegia sepium OX=47519 GN=atpB P... [more]
sp|Q9MRM0|ATPB_CANWI7.2e-5192.79ATP synthase subunit beta, chloroplastic OS=Canella winterana OX=3426 GN=atpB PE... [more]
sp|A6MMC9|ATPB_CHLSC7.2e-5192.79ATP synthase subunit beta, chloroplastic OS=Chloranthus spicatus OX=13006 GN=atp... [more]
BLAST of Bhi08M000465 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00480.15.2e-5292.79ATP synthase subunit beta[more]
AT5G08670.18.4e-4276.72ATP synthase alpha/beta family protein[more]
AT5G08680.18.4e-4276.72ATP synthase alpha/beta family protein[more]
AT5G08690.18.4e-4276.72ATP synthase alpha/beta family protein[more]
BLAST of Bhi08M000465 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0H3VNB1|A0A0H3VNB1_9LILI6.6e-4992.79ATP synthase subunit beta, chloroplastic OS=Drymophloeus litigiosus OX=145687 GN... [more]
tr|A0A142DPV3|A0A142DPV3_9LAMI6.6e-4992.79ATP synthase subunit beta, chloroplastic OS=Phyllostegia velutina OX=141782 GN=a... [more]
tr|B3XY57|B3XY57_MELLF8.6e-4993.69ATP synthase subunit beta (Fragment) OS=Melicytus latifolius OX=212268 GN=atpB P... [more]
tr|Q9MRG9|Q9MRG9_9ROSI8.6e-4993.69ATP synthase subunit beta (Fragment) OS=Melicytus alpinus OX=72460 GN=atpB PE=3 ... [more]
tr|B3XY59|B3XY59_9ROSI8.6e-4993.69ATP synthase subunit beta (Fragment) OS=Melicytus novae-zelandiae OX=450840 GN=a... [more]
BLAST of Bhi08M000465 vs. NCBI nr
Match NameE-valueIdentityDescription
AKF01380.19.9e-4992.79ATP synthase CF1 beta subunit (chloroplast) [Drymophloeus litigiosus][more]
YP_009242334.19.9e-4992.79ATP synthase CF1 beta subunit (chloroplast) [Phyllostegia velutina] >AMQ33219.1 ... [more]
AAG43923.11.3e-4893.69ATP synthase beta subunit, partial (chloroplast) [Theophrasta americana][more]
CAB90089.21.3e-4893.69ATP synthase beta subunit, partial (chloroplast) [Melicytus alpinus][more]
AGL73031.11.3e-4893.69ATP synthase beta subunit, partial (chloroplast) [Commelina communis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi08G000465Bhi08G000465gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi08M000465.exon1Bhi08M000465.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi08M000465cds.Bhi08M000465CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi08M000465Bhi08M000465-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 13..121
e-value: 5.1E-20
score: 71.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 1..121
e-value: 1.8E-42
score: 147.5
NoneNo IPR availablePANTHERPTHR15184:SF43ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTICcoord: 11..121
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 11..121
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..121