Bhi08M000368 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08M000368
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	LOB domain-containing protein
Location	chr8 : 15360528 .. 15362947 (-)
Sequence length	589

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGTTTTTTTTTTCTTTTTGAAAAAAAAAATTAGAAAATGAGAAGATCCCGTTCTTCCTCATCCCCTTGTGCTTCTTGTAAGCAGTTAAGGCGGCGTTGCTCAAAAGATTGCATATTTTCTCCATATTTTCCTCCTCACGATCCTCTCAAATTCTCCATTGTTCATAAGGTGTTTGGTGCTAGCAATCTCAGCAAAATGTTACAGGTCTTTTCTCTCTCATAATTCATAACCGTATCACTATTTTCTCTTCAACCATATTTGGTGTATCTTAAGTTATACTTCTTAGTAACTCAAAAAGAACAATGATTAGGTACAATAATTCCATGCTCTCCTTCTCTTCACACACAATTCTTTTTAAGATTAATCATTTAATTTTTATTAAATAGCTATTTAGGTCGCATAAAAATAGGTTCAACTTAAGCAATACCTAAGTATTTTTAATTTTCGTAAAAAATATAGTTTTTTTTTTCAATTCTCGAGATTTTAAGAATAGATTTATAAATCATGTGACATTTTAAATTGGCAAAAAAATTATTATTTTTTTCAATCTACTGTCTCTTTTCCCATTTTCTAAGCTCATCAAACGAGAAAAAAAGCCCATTTCAAAATCATAAAAAAGTCATCTGAAATGGGGTTCTCTATTTATGCATTCTTTCTTTCTTTGGCATCTTGAAGAGGGAAAGGGGGTGGAAGAAGTGGAGAGAGAGAAAAAATGGGAAGAGAGAGAAAGGACAATCTTTTAAAATTGATTTCTTATTTTAAAGGGGTAATTATTTTAAATGGTAAAATTATTAAAAAATATTTTCATGTATAACAAAATGTCACTATCTATCAGCGATAAATTGTACAGACACTGATAGATGATGTCTATTGCGGTCTACGATCTATCACTAATAGATAGTGTTGGTATATTTGTAAATAAGTTTGTTCATTTTTCTTTATTTGAAAACAACCTATTTTAAAACTTAGGGATTAAAAATGTACATATTCTTAAAACTTAGGGATTAAAAAGATATATTTTGAAAGCCTCATGAACCAAACACATTTATTATTTAAAATTTGAGATTGAAAGGATAATTTTTTTTTTAATACAATGAGAATAGTAGGATTTAGATCATAAATCTCTTAGTCACTAATACATCCGTATATTAGTTGAGTTATGCTCACTTTAACTTCTAATTATAATGATGGGTGAAGCGTCAATTTTTCCATTTAGGTTTTAGTTTTCATCTCTCCTTTTCTTTAAATGGCTTTAGAAAAATGATTTTTTTTTTCATTTAACATTTTATTCTATAATATTTGAACATAAAGTTTTTACTTGAAAATTCTTTTTGAAATACATACTAAAAAATTTCCTCAACTAATGTTATTTTTCTTATTTCTAATATTATAATTCGTTTCATGAGAAATATACTTATACAATAACACAAATTTCTTTTCAAAAATTGAAGATAAGAAACAAATAAAGTGGTTTTTCTTTTCAATTTTTTTATAAACTATTTCTAAATTTCAAGTTGAAAATATGCATCTAGAAAAGAGTGTTTTATAATGTTTATAAAAATTAAGCCTTGTTTACAAATGAAGAAACAAGGGGGAATTTGGAAATCTTTTGATTTTTTATTTTTGAAATATTATATATATTTTTAAAATAAATATTAGAATTCTTAATCAAATTTAAAAAATAAAAACGAGTTTGAAGAACTACTTTTCGTTTTCAAAAACATGATTTGGATTTTGAGAACATTTCTACAAAGTAGAAGATGAAACACCAAAACATAGGTGAAATGTAGATAAGTTAAATTATCAAACATGATGAAGCCTATCCTAATGTCTTATATCTTAGTAATGATGCCATTCAAATATATAAGTGAGAACAATACTTAGGTGTGCATTCCATTATATAATCACACAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAGGAAAAAAAAAAAAAAAAATATCAAGAATTTGGCACGTGACCATGAAATAGTATTTACATGACAGGAACTTCCAGTTCATCAAAGAACAGATGCAGTGAATAGTTTGGTATACGAAGCAAGTGCTCGAATACATGACCCGGTTTACGGGTGCGTTAGAACAATCTCATTCCTTCAAAATCAGTTATTTGAACTCCAAACACAACTGAGTGAAGCACAACTACTTGTTCAAATGCAGCAATCATCTCCAACCTTAGTTCAACATCAAAATCCCTCATTCCATTTTTCTCCTACTACTAATAATAACAGCCTTAACAGTAACCAATTTTCTGATCAATCCCCTGAATTTGCATCTTCTTCTTCTGTAATGCAATATTTTTGTCATAACTTAGACTCTCTATAGACTTCTTTCTTCTTTAACAAAATAAATATCCATTTTATCTTCAA

mRNA sequence

AAAAAAGTTTTTTTTTTCTTTTTGAAAAAAAAAATTAGAAAATGAGAAGATCCCGTTCTTCCTCATCCCCTTGTGCTTCTTGTAAGCAGTTAAGGCGGCGTTGCTCAAAAGATTGCATATTTTCTCCATATTTTCCTCCTCACGATCCTCTCAAATTCTCCATTGTTCATAAGGTGTTTGGTGCTAGCAATCTCAGCAAAATGTTACAGGAACTTCCAGTTCATCAAAGAACAGATGCAGTGAATAGTTTGGTATACGAAGCAAGTGCTCGAATACATGACCCGGTTTACGGGTGCGTTAGAACAATCTCATTCCTTCAAAATCAGTTATTTGAACTCCAAACACAACTGAGTGAAGCACAACTACTTGTTCAAATGCAGCAATCATCTCCAACCTTAGTTCAACATCAAAATCCCTCATTCCATTTTTCTCCTACTACTAATAATAACAGCCTTAACAGTAACCAATTTTCTGATCAATCCCCTGAATTTGCATCTTCTTCTTCTGTAATGCAATATTTTTGTCATAACTTAGACTCTCTATAGACTTCTTTCTTCTTTAACAAAATAAATATCCATTTTATCTTCAA

Coding sequence (CDS)

ATGAGAAGATCCCGTTCTTCCTCATCCCCTTGTGCTTCTTGTAAGCAGTTAAGGCGGCGTTGCTCAAAAGATTGCATATTTTCTCCATATTTTCCTCCTCACGATCCTCTCAAATTCTCCATTGTTCATAAGGTGTTTGGTGCTAGCAATCTCAGCAAAATGTTACAGGAACTTCCAGTTCATCAAAGAACAGATGCAGTGAATAGTTTGGTATACGAAGCAAGTGCTCGAATACATGACCCGGTTTACGGGTGCGTTAGAACAATCTCATTCCTTCAAAATCAGTTATTTGAACTCCAAACACAACTGAGTGAAGCACAACTACTTGTTCAAATGCAGCAATCATCTCCAACCTTAGTTCAACATCAAAATCCCTCATTCCATTTTTCTCCTACTACTAATAATAACAGCCTTAACAGTAACCAATTTTCTGATCAATCCCCTGAATTTGCATCTTCTTCTTCTGTAATGCAATATTTTTGTCATAACTTAGACTCTCTATAG

Protein sequence

MRRSRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQLLVQMQQSSPTLVQHQNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSSVMQYFCHNLDSL

Homology

[Close]

BLAST of Bhi08M000368 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 5.0e-42
Identity = 84/117 (71.79%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQL--SEAQLLVQMQQSSPTLVQH 123
           NSLV+EA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL  ++A++L    Q+ PTL  H
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Bhi08M000368 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-34
Identity = 69/105 (65.71%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 3   RSRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQ 62
           R + ++SPCA+CK LRRRC++DC+FSPYFP  +P KF+ VH+VFGASN++KMLQELP+HQ
Sbjct: 6   RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQ 65

Query: 63  RTDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ 108
           R DAV+S+VYEA+AR+ DPVYGCV  IS LQ Q+  LQ QL+ AQ
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQ 110

[Close]

BLAST of Bhi08M000368 vs. Swiss-Prot
Match: sp|Q8L8Q3|LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-32
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 4   SRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQR 63
           S  ++SPCA+CK LRR+C+ DC+F+PYFPP +P KF+ VH++FGASN+SK+L E+  HQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  TDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSE 106
            DAVNSL YEA AR+ DPVYGCV  IS LQ Q+  LQ +L E
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEE 134

[Close]

BLAST of Bhi08M000368 vs. Swiss-Prot
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.1e-32
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 9   SPCASCKQLRRRCSKD-CIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 68
           SPCA CK LRR+C KD C+F+PYFP  +P KF+IVHK+FGASN++KMLQEL  + R+DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 69  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ 108
           +S+VYEA+ARI DPVYGCV TIS L  QL  LQTQL+ AQ
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQ 112

[Close]

BLAST of Bhi08M000368 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-31
Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 4   SRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQR 63
           S S +SPCA+CK LRR+C   CIF+PYFPP +P KF+ VHK+FGASN++K+L EL  HQR
Sbjct: 5   SNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQR 64

Query: 64  TDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEA 107
            DAVNSL YEA AR+ DPVYGCV  IS+LQ Q+  LQ +L  A
Sbjct: 65  EDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAA 107

[Close]

BLAST of Bhi08M000368 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.8e-43
Identity = 84/117 (71.79%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQL--SEAQLLVQMQQSSPTLVQH 123
           NSLV+EA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL  ++A++L    Q+ PTL  H
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Bhi08M000368 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 147.9 bits (372), Expect = 5.6e-36
Identity = 69/105 (65.71%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 3   RSRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQ 62
           R + ++SPCA+CK LRRRC++DC+FSPYFP  +P KF+ VH+VFGASN++KMLQELP+HQ
Sbjct: 6   RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQ 65

Query: 63  RTDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ 108
           R DAV+S+VYEA+AR+ DPVYGCV  IS LQ Q+  LQ QL+ AQ
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQ 110

[Close]

BLAST of Bhi08M000368 vs. TAIR10
Match: AT3G27650.1 (LOB domain-containing protein 25)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-33
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 4   SRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQR 63
           S  ++SPCA+CK LRR+C+ DC+F+PYFPP +P KF+ VH++FGASN+SK+L E+  HQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  TDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSE 106
            DAVNSL YEA AR+ DPVYGCV  IS LQ Q+  LQ +L E
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEE 134

[Close]

BLAST of Bhi08M000368 vs. TAIR10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-33
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 9   SPCASCKQLRRRCSKD-CIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 68
           SPCA CK LRR+C KD C+F+PYFP  +P KF+IVHK+FGASN++KMLQEL  + R+DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 69  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ 108
           +S+VYEA+ARI DPVYGCV TIS L  QL  LQTQL+ AQ
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQ 112

[Close]

BLAST of Bhi08M000368 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 137.9 bits (346), Expect = 5.8e-33
Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 4   SRSSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQR 63
           S S +SPCA+CK LRR+C   CIF+PYFPP +P KF+ VHK+FGASN++K+L EL  HQR
Sbjct: 5   SNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQR 64

Query: 64  TDAVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEA 107
            DAVNSL YEA AR+ DPVYGCV  IS+LQ Q+  LQ +L  A
Sbjct: 65  EDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAA 107

[Close]

BLAST of Bhi08M000368 vs. TrEMBL
Match: tr|A0A2U1KG39|A0A2U1KG39_ARTAN (Lateral organ boundaries (LOB) domain family protein OS=Artemisia annua OX=35608 GN=CTI12_AA606800 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 6   SSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTD 65
           S SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR D
Sbjct: 3   SGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGD 62

Query: 66  AVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSPTLVQH 125
           AV+SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ       H
Sbjct: 63  AVSSLVYEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPELPTTH 122

Query: 126 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSS 156
            +   + + T   +  N+N F DQ P+F S +S
Sbjct: 123 PSMVDYDAKTLLLSGSNTNDFGDQIPQFLSYTS 155

[Close]

BLAST of Bhi08M000368 vs. TrEMBL
Match: tr|A0A2U1L6A2|A0A2U1L6A2_ARTAN (Lateral organ boundaries (LOB) domain family protein OS=Artemisia annua OX=35608 GN=CTI12_AA524900 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 6   SSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTD 65
           S SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR D
Sbjct: 3   SGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGD 62

Query: 66  AVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSPTLVQH 125
           AV+SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ       H
Sbjct: 63  AVSSLVYEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPELPTTH 122

Query: 126 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSS 156
            +   + + T   +  N+N F DQ P+F S +S
Sbjct: 123 PSMVDYDAKTLLLSGSNTNDFGDQIPQFLSYTS 155

[Close]

BLAST of Bhi08M000368 vs. TrEMBL
Match: tr|A0A2G9I6Q4|A0A2G9I6Q4_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01818 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.3e-41
Identity = 99/155 (63.87%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 5   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGDAV 64

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSP-TLVQHQ 127
           +SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ  P TL  H+
Sbjct: 65  SSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEQPITLPPHE 124

Query: 128 NPSFHFSPTTNNNSLNSNQFSDQSPEFASSSSVMQ 159
           +      PT N N+L   Q        +SS +VMQ
Sbjct: 125 DDKTLLLPTNNFNNL---QHYLNFASTSSSPNVMQ 156

[Close]

BLAST of Bhi08M000368 vs. TrEMBL
Match: tr|A0A059DAN8|A0A059DAN8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03991 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 6   SSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTD 65
           S SSPCASCK LRRRCSKDCIF+PYFPPHDP KF+IVHKVFGASNLSKMLQELPV+QR D
Sbjct: 5   SGSSPCASCKLLRRRCSKDCIFAPYFPPHDPHKFAIVHKVFGASNLSKMLQELPVNQRGD 64

Query: 66  AVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSPTLVQH 125
           AV+SLVYEA+AR+ DPVYGCV TIS+LQNQ+ ELQ QL+ AQ   L +QM Q  P LVQ 
Sbjct: 65  AVSSLVYEANARVRDPVYGCVGTISYLQNQVSELQLQLAAAQAEVLSMQMHQ-KPHLVQQ 124

Query: 126 QNPSFHFSPTTNNNSLN 140
              +       N NS++
Sbjct: 125 DRETSFLMAGDNFNSVS 140

[Close]

BLAST of Bhi08M000368 vs. TrEMBL
Match: tr|A0A2I4FAF1|A0A2I4FAF1_9ROSI (LOB domain-containing protein 12 OS=Juglans regia OX=51240 GN=LOC108997001 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40
Identity = 98/156 (62.82%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELP+HQR DAV
Sbjct: 4   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPIHQRADAV 63

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQ--SSPTLVQH 127
           +SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ  + P  +  
Sbjct: 64  SSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEFLCIQMQQEPNLPAQIDQ 123

Query: 128 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSSVMQ 159
              SF  S   NNN         Q   FASSS+V Q
Sbjct: 124 DEKSFLLSSNFNNN-------IPQYLGFASSSTVNQ 152

[Close]

BLAST of Bhi08M000368 vs. NCBI nr
Match: XP_022752923.1 (LOB domain-containing protein 12-like [Durio zibethinus])

HSP 1 Score: 180.6 bits (457), Expect = 4.3e-42
Identity = 102/156 (65.38%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFP  DP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 4   SSPCASCKLLRRRCTKDCIFAPYFPSDDPYKFAIVHKVFGASNVSKMLQELPVHQRADAV 63

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSS--PTLVQH 127
           +SL YEA+AR+ DPVYGCV  ISFLQNQ+ +LQ QL+ AQ   L +QMQQ S  PTL+ H
Sbjct: 64  SSLAYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAQNEILCIQMQQESAWPTLIDH 123

Query: 128 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSSVMQ 159
           Q     F   TNN   N +Q+ +    FASSS+V+Q
Sbjct: 124 QQDDKSFLLATNNLD-NISQYLN----FASSSNVIQ 154

[Close]

BLAST of Bhi08M000368 vs. NCBI nr
Match: XP_021909748.1 (LOB domain-containing protein 12 [Carica papaya] >XP_021909749.1 LOB domain-containing protein 12 [Carica papaya])

HSP 1 Score: 179.9 bits (455), Expect = 7.3e-42
Identity = 102/158 (64.56%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           +SPCASCK LRRRC+KDCIF+PYFP HDP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 4   TSPCASCKLLRRRCAKDCIFAPYFPSHDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 63

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSS--PTL-VQ 127
           +SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +L+ QL+ AQ   L +QMQQ    PTL V 
Sbjct: 64  SSLVYEANARVRDPVYGCVGAISYLQNQVSQLEMQLAVAQAEILCIQMQQEPILPTLQVD 123

Query: 128 HQNPSFHFSPTTNNNSLNSNQFS-DQSPEFASSSSVMQ 159
           HQ+     S  T  N  N N  S      FASSS+VMQ
Sbjct: 124 HQDDKLLLSTITTTNDNNFNNLSLPHYLNFASSSNVMQ 161

[Close]

BLAST of Bhi08M000368 vs. NCBI nr
Match: PWA35719.1 (lateral organ boundaries (LOB) domain family protein [Artemisia annua])

HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 6   SSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTD 65
           S SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR D
Sbjct: 3   SGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGD 62

Query: 66  AVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSPTLVQH 125
           AV+SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ       H
Sbjct: 63  AVSSLVYEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPELPTTH 122

Query: 126 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSS 156
            +   + + T   +  N+N F DQ P+F S +S
Sbjct: 123 PSMVDYDAKTLLLSGSNTNDFGDQIPQFLSYTS 155

[Close]

BLAST of Bhi08M000368 vs. NCBI nr
Match: PWA44504.1 (lateral organ boundaries (LOB) domain family protein [Artemisia annua])

HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41
Identity = 96/153 (62.75%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 6   SSSSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTD 65
           S SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR D
Sbjct: 3   SGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGD 62

Query: 66  AVNSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSPTLVQH 125
           AV+SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ       H
Sbjct: 63  AVSSLVYEANARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPELPTTH 122

Query: 126 QNPSFHFSPTTNNNSLNSNQFSDQSPEFASSSS 156
            +   + + T   +  N+N F DQ P+F S +S
Sbjct: 123 PSMVDYDAKTLLLSGSNTNDFGDQIPQFLSYTS 155

[Close]

BLAST of Bhi08M000368 vs. NCBI nr
Match: PIN25439.1 (hypothetical protein CDL12_01818 [Handroanthus impetiginosus])

HSP 1 Score: 176.4 bits (446), Expect = 8.1e-41
Identity = 99/155 (63.87%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 8   SSPCASCKQLRRRCSKDCIFSPYFPPHDPLKFSIVHKVFGASNLSKMLQELPVHQRTDAV 67
           SSPCASCK LRRRC+KDCIF+PYFPP DP KF+IVHKVFGASN+SKMLQELPVHQR DAV
Sbjct: 5   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRGDAV 64

Query: 68  NSLVYEASARIHDPVYGCVRTISFLQNQLFELQTQLSEAQ---LLVQMQQSSP-TLVQHQ 127
           +SLVYEA+AR+ DPVYGCV  IS+LQNQ+ +LQ QL+ AQ   L +QMQQ  P TL  H+
Sbjct: 65  SSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEQPITLPPHE 124

Query: 128 NPSFHFSPTTNNNSLNSNQFSDQSPEFASSSSVMQ 159
           +      PT N N+L   Q        +SS +VMQ
Sbjct: 125 DDKTLLLPTNNFNNL---QHYLNFASTSSSPNVMQ 156

The following BLAST results are available for this feature:

BLAST of Bhi08M000368 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LBW3\|LBD12_ARATH	5.0e-42	71.79	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
sp\|Q9SHE9\|LBD4_ARATH	1.0e-34	65.71	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
sp\|Q8L8Q3\|LBD25_ARATH	4.7e-32	61.76	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
sp\|Q9SA51\|LBD3_ARATH	6.1e-32	68.00	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
sp\|Q9FML4\|LOB_ARATH	1.0e-31	63.11	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Bhi08M000368 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30130.1	2.8e-43	71.79	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	5.6e-36	65.71	LOB domain-containing protein 4	[more]
AT3G27650.1	2.6e-33	61.76	LOB domain-containing protein 25	[more]
AT1G16530.1	3.4e-33	68.00	ASYMMETRIC LEAVES 2-like 9	[more]
AT5G63090.2	5.8e-33	63.11	Lateral organ boundaries (LOB) domain family protein	[more]

BLAST of Bhi08M000368 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2U1KG39\|A0A2U1KG39_ARTAN	1.8e-41	62.75	Lateral organ boundaries (LOB) domain family protein OS=Artemisia annua OX=35608...	[more]
tr\|A0A2U1L6A2\|A0A2U1L6A2_ARTAN	1.8e-41	62.75	Lateral organ boundaries (LOB) domain family protein OS=Artemisia annua OX=35608...	[more]
tr\|A0A2G9I6Q4\|A0A2G9I6Q4_9LAMI	5.3e-41	63.87	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01818 P...	[more]
tr\|A0A059DAN8\|A0A059DAN8_EUCGR	1.2e-40	69.34	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03991 PE=4 SV...	[more]
tr\|A0A2I4FAF1\|A0A2I4FAF1_9ROSI	1.5e-40	62.82	LOB domain-containing protein 12 OS=Juglans regia OX=51240 GN=LOC108997001 PE=4 ...	[more]

BLAST of Bhi08M000368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022752923.1	4.3e-42	65.38	LOB domain-containing protein 12-like [Durio zibethinus]	[more]
XP_021909748.1	7.3e-42	64.56	LOB domain-containing protein 12 [Carica papaya] >XP_021909749.1 LOB domain-cont...	[more]
PWA35719.1	2.8e-41	62.75	lateral organ boundaries (LOB) domain family protein [Artemisia annua]	[more]
PWA44504.1	2.8e-41	62.75	lateral organ boundaries (LOB) domain family protein [Artemisia annua]	[more]
PIN25439.1	8.1e-41	63.87	hypothetical protein CDL12_01818 [Handroanthus impetiginosus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi08G000368	Bhi08G000368	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M000368.utr3p1	Bhi08M000368.utr3p1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M000368.exon2	Bhi08M000368.exon2	exon
Bhi08M000368.exon1	Bhi08M000368.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi08M000368	cds.Bhi08M000368	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M000368.utr5p1	Bhi08M000368.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi08M000368	Bhi08M000368-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..146
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 4..131
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..107 e-value: 4.5E-39 score: 132.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 24.783