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Name | Bhi08M000317 |
Type | mRNA |
Organism | Benincasa hispida (Wax gourd) |
Description | Unknown protein |
Location | chr8 : 13085931 .. 13087231 (-) |
Sequence length | 1301 |
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. AAACGATGTATCAAATTACGAATTTAAGACATTACGACATTTATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAGACCTATTTTCTATTATGCGAGTGTATGTTTTTCTTGTTCTAAGCAAATGATGACATAGTACAGGCAAATTATTGCTAAATTTTATGTGCTCTCACTTTGAGTAAGGACTGAGTTTTGGTTAATTACATTACGTCAAATCCATATCTAAAGTGTTGTGTCGTGTAAACCACTGCATTGAAAATAATTTTGGCACGACCTTGGTGTATATCATTTATGTCGATTACTTTCCAAGATTAACACAACACTCATCTCGAACGTACATTCATTAGTGAGAGGGTTGGAATCAAGAGAAAGCTGAGAATATGTGTGGAAAAGAAGAAGGAGATGAAAGAATTAATGTTCTATGAATTCTAAATTCATTGATTTTTGAAGAAGACAACGACGTTCAGATCTAGAGAAAATTAATTTTCCAGATTCAAATTAATTCCATAATATTTTAAAAAATAGAAGGAAAAAAATAAAAGTTTCTTTTTTTTCGCACGAGTGCAGTTACTCAAACTCACTCGTCTGTTGGATAGCGACGGTTGCGGCGTGCTATAGATGAAGAGTCTTAACTACCACTTTAACCACTTTTGCAAGTCCTTTGTAGAGCTCTCATATTTATACTGGATCTCTAAACTTCCCACATGAGATAGAAATTTACTCTCTAACTGTGAACTTGCTACGGGTCATAAGTCTTGATAATTGTGAAACATTTCGCAACATTAACATGTGTGACGCTTTTAGTTGTCGCTTTGAAAATTTTTTATGAAGATGATGTTAGTTGAACGCATGATGAATTGAATTCTTAGAATATATTTTTCTAAAGTCTTCCATTTATTTGTTTCTACTAATTCGATTTAATTTATCAAAAAGTGTCTTAAGGAAACTTGTTTCATCATTGAATAATTATTTTCTTTCGGTTAAGAGTGGTA mRNA sequence AAACGATGTATCAAATTACGAATTTAAGACATTACGACATTTATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAGACCTATTTTCTATTATGCGAGTGTATGTTTTTCTTGTTCTAAGCAAATGATGACATAGTACAGGCAAATTATTGCTAAATTTTATGTGCTCTCACTTTGAGTAAGGACTGAGTTTTGGTTAATTACATTACGTCAAATCCATATCTAAAGTGTTGTGTCGTGTAAACCACTGCATTGAAAATAATTTTGGCACGACCTTGGTGTATATCATTTATGTCGATTACTTTCCAAGATTAACACAACACTCATCTCGAACGTACATTCATTAGTGAGAGGGTTGGAATCAAGAGAAAGCTGAGAATATGTGTGGAAAAGAAGAAGGAGATGAAAGAATTAATGTTCTATGAATTCTAAATTCATTGATTTTTGAAGAAGACAACGACGTTCAGATCTAGAGAAAATTAATTTTCCAGATTCAAATTAATTCCATAATATTTTAAAAAATAGAAGGAAAAAAATAAAAGTTTCTTTTTTTTCGCACGAGTGCAGTTACTCAAACTCACTCGTCTGTTGGATAGCGACGGTTGCGGCGTGCTATAGATGAAGAGTCTTAACTACCACTTTAACCACTTTTGCAAGTCCTTTGTAGAGCTCTCATATTTATACTGGATCTCTAAACTTCCCACATGAGATAGAAATTTACTCTCTAACTGTGAACTTGCTACGGGTCATAAGTCTTGATAATTGTGAAACATTTCGCAACATTAACATGTGTGACGCTTTTAGTTGTCGCTTTGAAAATTTTTTATGAAGATGATGTTAGTTGAACGCATGATGAATTGAATTCTTAGAATATATTTTTCTAAAGTCTTCCATTTATTTGTTTCTACTAATTCGATTTAATTTATCAAAAAGTGTCTTAAGGAAACTTGTTTCATCATTGAATAATTATTTTCTTTCGGTTAAGAGTGGTA Coding sequence (CDS) ATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAG Protein sequence MITNNTLIFVYKFSRLLLQFHKTFTTNSSFSYLSSSTLCEREKPLKLKKMVEAPRRQEPNNPPRRGKIMGQIIKDTFSFTTSFVTAAGTQSRGEAPGEAEAAERPNQPPPPHRA
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi08M000317.utr3p1 | Bhi08M000317.utr3p1 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Bhi08M000317 | cds.Bhi08M000317 | CDS |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi08M000317.exon1 | Bhi08M000317.exon1 | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi08M000317.utr5p1 | Bhi08M000317.utr5p1 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Bhi08M000317 | Bhi08M000317-protein | polypeptide |
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 85..114 |
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