Bhi08M000317 (mRNA) Wax gourd

NameBhi08M000317
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr8 : 13085931 .. 13087231 (-)
Sequence length1301
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGATGTATCAAATTACGAATTTAAGACATTACGACATTTATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAGACCTATTTTCTATTATGCGAGTGTATGTTTTTCTTGTTCTAAGCAAATGATGACATAGTACAGGCAAATTATTGCTAAATTTTATGTGCTCTCACTTTGAGTAAGGACTGAGTTTTGGTTAATTACATTACGTCAAATCCATATCTAAAGTGTTGTGTCGTGTAAACCACTGCATTGAAAATAATTTTGGCACGACCTTGGTGTATATCATTTATGTCGATTACTTTCCAAGATTAACACAACACTCATCTCGAACGTACATTCATTAGTGAGAGGGTTGGAATCAAGAGAAAGCTGAGAATATGTGTGGAAAAGAAGAAGGAGATGAAAGAATTAATGTTCTATGAATTCTAAATTCATTGATTTTTGAAGAAGACAACGACGTTCAGATCTAGAGAAAATTAATTTTCCAGATTCAAATTAATTCCATAATATTTTAAAAAATAGAAGGAAAAAAATAAAAGTTTCTTTTTTTTCGCACGAGTGCAGTTACTCAAACTCACTCGTCTGTTGGATAGCGACGGTTGCGGCGTGCTATAGATGAAGAGTCTTAACTACCACTTTAACCACTTTTGCAAGTCCTTTGTAGAGCTCTCATATTTATACTGGATCTCTAAACTTCCCACATGAGATAGAAATTTACTCTCTAACTGTGAACTTGCTACGGGTCATAAGTCTTGATAATTGTGAAACATTTCGCAACATTAACATGTGTGACGCTTTTAGTTGTCGCTTTGAAAATTTTTTATGAAGATGATGTTAGTTGAACGCATGATGAATTGAATTCTTAGAATATATTTTTCTAAAGTCTTCCATTTATTTGTTTCTACTAATTCGATTTAATTTATCAAAAAGTGTCTTAAGGAAACTTGTTTCATCATTGAATAATTATTTTCTTTCGGTTAAGAGTGGTA

mRNA sequence

AAACGATGTATCAAATTACGAATTTAAGACATTACGACATTTATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAGACCTATTTTCTATTATGCGAGTGTATGTTTTTCTTGTTCTAAGCAAATGATGACATAGTACAGGCAAATTATTGCTAAATTTTATGTGCTCTCACTTTGAGTAAGGACTGAGTTTTGGTTAATTACATTACGTCAAATCCATATCTAAAGTGTTGTGTCGTGTAAACCACTGCATTGAAAATAATTTTGGCACGACCTTGGTGTATATCATTTATGTCGATTACTTTCCAAGATTAACACAACACTCATCTCGAACGTACATTCATTAGTGAGAGGGTTGGAATCAAGAGAAAGCTGAGAATATGTGTGGAAAAGAAGAAGGAGATGAAAGAATTAATGTTCTATGAATTCTAAATTCATTGATTTTTGAAGAAGACAACGACGTTCAGATCTAGAGAAAATTAATTTTCCAGATTCAAATTAATTCCATAATATTTTAAAAAATAGAAGGAAAAAAATAAAAGTTTCTTTTTTTTCGCACGAGTGCAGTTACTCAAACTCACTCGTCTGTTGGATAGCGACGGTTGCGGCGTGCTATAGATGAAGAGTCTTAACTACCACTTTAACCACTTTTGCAAGTCCTTTGTAGAGCTCTCATATTTATACTGGATCTCTAAACTTCCCACATGAGATAGAAATTTACTCTCTAACTGTGAACTTGCTACGGGTCATAAGTCTTGATAATTGTGAAACATTTCGCAACATTAACATGTGTGACGCTTTTAGTTGTCGCTTTGAAAATTTTTTATGAAGATGATGTTAGTTGAACGCATGATGAATTGAATTCTTAGAATATATTTTTCTAAAGTCTTCCATTTATTTGTTTCTACTAATTCGATTTAATTTATCAAAAAGTGTCTTAAGGAAACTTGTTTCATCATTGAATAATTATTTTCTTTCGGTTAAGAGTGGTA

Coding sequence (CDS)

ATGATCACAAATAATACTTTGATTTTTGTCTATAAATTCTCTCGTCTCCTCCTTCAATTTCACAAAACATTTACCACCAATTCCTCTTTTTCTTATCTATCTTCTTCTACTCTGTGTGAGAGAGAGAAGCCATTGAAGCTTAAGAAAATGGTAGAAGCCCCACGGCGTCAAGAACCAAACAATCCTCCAAGAAGGGGCAAAATCATGGGTCAGATTATTAAGGACACTTTCAGCTTTACAACGTCCTTTGTCACCGCTGCAGGGACACAATCTAGAGGAGAAGCTCCCGGCGAGGCCGAGGCGGCCGAGCGACCTAATCAACCCCCTCCGCCGCATCGGGCCTAG

Protein sequence

MITNNTLIFVYKFSRLLLQFHKTFTTNSSFSYLSSSTLCEREKPLKLKKMVEAPRRQEPNNPPRRGKIMGQIIKDTFSFTTSFVTAAGTQSRGEAPGEAEAAERPNQPPPPHRA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi08G000317Bhi08G000317gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi08M000317.utr3p1Bhi08M000317.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi08M000317cds.Bhi08M000317CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi08M000317.exon1Bhi08M000317.exon1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi08M000317.utr5p1Bhi08M000317.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi08M000317Bhi08M000317-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..114