Bhi07M000060 (mRNA) Wax gourd

Overview
NameBhi07M000060
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionNADPH-dependent pterin aldehyde reductase-like
Locationchr7 : 3811232 .. 3811501 (-)
Sequence length270
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACCACCAATTCATCAAACGATGAAGAATTACAAGAAACGAATGGATATGCTGAAATAAAGGAAGCAGAAACCACAAAAAGAGTCGTAATAAGTGGAGTGAGCAGAGGGTTAGGACGAGCTTTGGCATTGGAATTGGCTAAACGTGGGCATACAATCATTGGTTGTGGTCGTGACAAAATCAAATTAGATTCACTTCAACAACAACTCTCCAATGCTTCCCCACGAGACCATTTGCTCTTCAACCTGGATGTGGAAACTTTTTAA

mRNA sequence

ATGGCTACCACCAATTCATCAAACGATGAAGAATTACAAGAAACGAATGGATATGCTGAAATAAAGGAAGCAGAAACCACAAAAAGAGTCGTAATAAGTGGAGTGAGCAGAGGGTTAGGACGAGCTTTGGCATTGGAATTGGCTAAACGTGGGCATACAATCATTGGTTGTGGTCGTGACAAAATCAAATTAGATTCACTTCAACAACAACTCTCCAATGCTTCCCCACGAGACCATTTGCTCTTCAACCTGGATGTGGAAACTTTTTAA

Coding sequence (CDS)

ATGGCTACCACCAATTCATCAAACGATGAAGAATTACAAGAAACGAATGGATATGCTGAAATAAAGGAAGCAGAAACCACAAAAAGAGTCGTAATAAGTGGAGTGAGCAGAGGGTTAGGACGAGCTTTGGCATTGGAATTGGCTAAACGTGGGCATACAATCATTGGTTGTGGTCGTGACAAAATCAAATTAGATTCACTTCAACAACAACTCTCCAATGCTTCCCCACGAGACCATTTGCTCTTCAACCTGGATGTGGAAACTTTTTAA

Protein sequence

MATTNSSNDEELQETNGYAEIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDVETF
Homology
[Close]
BLAST of Bhi07M000060 vs. Swiss-Prot
Match: sp|Q9SY73|PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-12
Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 28 KRVVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDVE 87
          + V+I+GVS+GLGRALALELAKRGHT+IGC R + KL +LQ +LS+++  +HLL   DV+
Sbjct: 18 RTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTADVK 76

Query: 88 T 89
          +
Sbjct: 78 S 76

[Close]
BLAST of Bhi07M000060 vs. TAIR10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-13
Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 28 KRVVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDVE 87
          + V+I+GVS+GLGRALALELAKRGHT+IGC R + KL +LQ +LS+++  +HLL   DV+
Sbjct: 18 RTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTADVK 76

Query: 88 T 89
          +
Sbjct: 78 S 76

[Close]
BLAST of Bhi07M000060 vs. TrEMBL
Match: tr|A0A1S4E466|A0A1S4E466_CUCME (LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo OX=3656 GN=LOC103501570 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-25
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MATTNSSN-DEELQETNGYAE-IKEAETTKRVVISGVSRGLGRALALELAKRGHTIIGCG 60
          MA T SSN D+EL+E N   + I EAETTK +VISGVSRGLGRALALE AK GHTIIGC 
Sbjct: 1  MAKTKSSNDDQELEERNEVGDMIMEAETTKTIVISGVSRGLGRALALEFAKLGHTIIGCD 60

Query: 61 RDKIKLDSLQQQLSNASPRDHLLFNLDVET 89
          RDKIKLDSL+ QLSNASPR+HLLFNLDV++
Sbjct: 61 RDKIKLDSLRLQLSNASPRNHLLFNLDVKS 90

[Close]
BLAST of Bhi07M000060 vs. TrEMBL
Match: tr|A0A0A0KIN8|A0A0A0KIN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G011650 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-24
Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 0 

Query: 1  MATTNSSN--DEELQETNGYA--EIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIG 60
          M TTNSSN   E L+E N      I EAETTK +VISGVSRGLGRALALELAK GHTIIG
Sbjct: 7  MGTTNSSNGHQELLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIG 66

Query: 61 CGRDKIKLDSLQQQLSNASPRDHLLFNLDVET 89
          C RDKIKLDSLQ QLSNASPR+HLLFN DV++
Sbjct: 67 CSRDKIKLDSLQLQLSNASPRNHLLFNFDVKS 98

[Close]
BLAST of Bhi07M000060 vs. TrEMBL
Match: tr|A0A1S3CMB1|A0A1S3CMB1_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.4e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 30 VVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDV 87
          V+I+GVS+GLGRALALELA RGHTIIGC RD+IKLDSLQQQLSN SP  H  F LDV
Sbjct: 3  VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDV 59

[Close]
BLAST of Bhi07M000060 vs. TrEMBL
Match: tr|A0A1S3CNS1|A0A1S3CNS1_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.4e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 30 VVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDV 87
          V+I+GVS+GLGRALALELA RGHTIIGC RD+IKLDSLQQQLSN SP  H  F LDV
Sbjct: 3  VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDV 59

[Close]
BLAST of Bhi07M000060 vs. TrEMBL
Match: tr|A0A1S3CM59|A0A1S3CM59_CUCME (NADPH-dependent pterin aldehyde reductase-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502552 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.4e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 30 VVISGVSRGLGRALALELAKRGHTIIGCGRDKIKLDSLQQQLSNASPRDHLLFNLDV 87
          V+I+GVS+GLGRALALELA RGHTIIGC RD+IKLDSLQQQLSN SP  H  F LDV
Sbjct: 3  VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDV 59

[Close]
BLAST of Bhi07M000060 vs. NCBI nr
Match: XP_016903014.1 (PREDICTED: LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase-like [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 9.6e-25
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 1  MATTNSSN-DEELQETNGYAE-IKEAETTKRVVISGVSRGLGRALALELAKRGHTIIGCG 60
          MA T SSN D+EL+E N   + I EAETTK +VISGVSRGLGRALALE AK GHTIIGC 
Sbjct: 1  MAKTKSSNDDQELEERNEVGDMIMEAETTKTIVISGVSRGLGRALALEFAKLGHTIIGCD 60

Query: 61 RDKIKLDSLQQQLSNASPRDHLLFNLDVET 89
          RDKIKLDSL+ QLSNASPR+HLLFNLDV++
Sbjct: 61 RDKIKLDSLRLQLSNASPRNHLLFNLDVKS 90

[Close]
BLAST of Bhi07M000060 vs. NCBI nr
Match: KGN49575.1 (hypothetical protein Csa_5G011650 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 6.2e-24
Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 0 

Query: 1  MATTNSSN--DEELQETNGYA--EIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIG 60
          M TTNSSN   E L+E N      I EAETTK +VISGVSRGLGRALALELAK GHTIIG
Sbjct: 7  MGTTNSSNGHQELLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIG 66

Query: 61 CGRDKIKLDSLQQQLSNASPRDHLLFNLDVET 89
          C RDKIKLDSLQ QLSNASPR+HLLFN DV++
Sbjct: 67 CSRDKIKLDSLQLQLSNASPRNHLLFNFDVKS 98

[Close]
BLAST of Bhi07M000060 vs. NCBI nr
Match: XP_004149629.2 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 6.2e-24
Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 0 

Query: 1  MATTNSSN--DEELQETNGYA--EIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIG 60
          M TTNSSN   E L+E N      I EAETTK +VISGVSRGLGRALALELAK GHTIIG
Sbjct: 7  MGTTNSSNGHQELLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIG 66

Query: 61 CGRDKIKLDSLQQQLSNASPRDHLLFNLDVET 89
          C RDKIKLDSLQ QLSNASPR+HLLFN DV++
Sbjct: 67 CSRDKIKLDSLQLQLSNASPRNHLLFNFDVKS 98

[Close]
BLAST of Bhi07M000060 vs. NCBI nr
Match: XP_011654452.1 (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-23
Identity = 68/89 (76.40%), Postives = 71/89 (79.78%), Query Frame = 0 

Query: 1  MATTNSSN--DEELQETNGYA--EIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIG 60
          M TTNSSN   E L+E N      I EAETTK +VISGVSRGLGRALALELAK GHTIIG
Sbjct: 7  MGTTNSSNGHQELLEERNEEVGEMIMEAETTKVIVISGVSRGLGRALALELAKLGHTIIG 66

Query: 61 CGRDKIKLDSLQQQLSNASPRDHLLFNLD 86
          C RDKIKLDSLQ QLSNASPR+HLLFN D
Sbjct: 67 CSRDKIKLDSLQLQLSNASPRNHLLFNFD 95

[Close]
BLAST of Bhi07M000060 vs. NCBI nr
Match: XP_022994368.1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-18
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 0 

Query: 1  MATTNSSNDEELQETNGYAEIKEAETTKRVVISGVSRGLGRALALELAKRGHTIIGCGRD 60
          MA T S  ++E+Q+ N   E  EAET K V+I+GV+RG+GRALALELAK GH IIGCGRD
Sbjct: 1  MAATIS--NDEVQQKNECEE--EAETKKTVLITGVTRGIGRALALELAKHGHLIIGCGRD 60

Query: 61 KIKLDSLQQQLSNASPRDHLLFNLDVET 89
          K  LDSLQ QLSNASP++HLLF  DV++
Sbjct: 61 KTNLDSLQLQLSNASPQNHLLFIADVKS 84

The following BLAST results are available for this feature:
BLAST of Bhi07M000060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SY73|PTALR_ARATH2.2e-1259.02NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
BLAST of Bhi07M000060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10310.11.2e-1359.02NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of Bhi07M000060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E466|A0A1S4E466_CUCME6.4e-2575.56LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase-like OS=Cucumis m... [more]
tr|A0A0A0KIN8|A0A0A0KIN8_CUCSA4.1e-2475.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G011650 PE=3 SV=1[more]
tr|A0A1S3CMB1|A0A1S3CMB1_CUCME5.4e-1678.95NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucumis melo OX=365... [more]
tr|A0A1S3CNS1|A0A1S3CNS1_CUCME5.4e-1678.95NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucumis melo OX=365... [more]
tr|A0A1S3CM59|A0A1S3CM59_CUCME5.4e-1678.95NADPH-dependent pterin aldehyde reductase-like isoform X3 OS=Cucumis melo OX=365... [more]
BLAST of Bhi07M000060 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903014.19.6e-2575.56PREDICTED: LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase-like [... [more]
KGN49575.16.2e-2475.00hypothetical protein Csa_5G011650 [Cucumis sativus][more]
XP_004149629.26.2e-2475.00PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sa... [more]
XP_011654452.14.0e-2376.40PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sa... [more]
XP_022994368.13.0e-1864.77NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucurbita maxima][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347SDR_fam
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006760 folic acid-containing compound metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005829 cytosol
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi07G000060Bhi07G000060gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi07M000060cds.Bhi07M000060CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi07M000060.exon1Bhi07M000060.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi07M000060Bhi07M000060-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 5..89
e-value: 6.3E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR45267:SF2NADPH-DEPENDENT PTERIN ALDEHYDE REDUCTASEcoord: 18..87
NoneNo IPR availablePANTHERPTHR45267FAMILY NOT NAMEDcoord: 18..87
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 28..87
e-value: 4.0E-8
score: 32.9
IPR036291NAD(P)-binding domain superfamilySUPERFAMILYSSF51735NAD(P)-binding Rossmann-fold domainscoord: 26..88