Bhi06M001578 (mRNA) Wax gourd

NameBhi06M001578
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 51901420 .. 51901971 (+)
Sequence length552
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAAAAACAAGAACGGATCCAATATTTTTTTTTCAGATCACAGAAACTTAAAAAAAATCACAAATATAATAATAAATCATCTCATCTGGTTCACAATTATTCAACACCTAGGGCAGGAAAATCGTCGAAAACAAGAAAGAAGAAGGAGGAGGAGGAAGGATCGAATTCAATTCCTGGCAAAGAGAATAGGAGTATCGTCATCATCATCGTCGCTCAAAGCGGCACCAGGTTGAGAAGTCTTACCGACGACAGGGGAGGAGGAAGGGGAAGAGGAAGCAGAGGCAAGGACGAGCGTCAAGCAGCCTTCGCTCCAGGATCGACGAATGGGATAGGAGATGGATTTGGACTTGGAATGGGAGCAGTGAGGAGGTTGACGGCGGGATTTGTGGAGAGCGCAGCCGCAGTTGCGGTGGTATGGACGACGGTGGATTTCGGAGTCGCAGCCGGCGATGCAAGCCTCGTAGACGGGGCGGAGGAGGCCGTCGGCGGCCATGGAAGAAGAGGAATCGGACCACCGCGTGCGGAAGGTGTTTGGAGAAAAGCGTGA

mRNA sequence

ATGATTCAAAAACAAGAACGGATCCAATATTTTTTTTTCAGATCACAGAAACTTAAAAAAAATCACAAATATAATAATAAATCATCTCATCTGGTTCACAATTATTCAACACCTAGGGCAGGAAAATCGTCGAAAACAAGAAAGAAGAAGGAGGAGGAGGAAGGATCGAATTCAATTCCTGGCAAAGAGAATAGGAGTATCGTCATCATCATCGTCGCTCAAAGCGGCACCAGGTTGAGAAGTCTTACCGACGACAGGGGAGGAGGAAGGGGAAGAGGAAGCAGAGGCAAGGACGAGCGTCAAGCAGCCTTCGCTCCAGGATCGACGAATGGGATAGGAGATGGATTTGGACTTGGAATGGGAGCAGTGAGGAGGTTGACGGCGGGATTTGTGGAGAGCGCAGCCGCAGTTGCGGTGGTATGGACGACGGTGGATTTCGGAGTCGCAGCCGGCGATGCAAGCCTCGTAGACGGGGCGGAGGAGGCCGTCGGCGGCCATGGAAGAAGAGGAATCGGACCACCGCGTGCGGAAGGTGTTTGGAGAAAAGCGTGA

Coding sequence (CDS)

ATGATTCAAAAACAAGAACGGATCCAATATTTTTTTTTCAGATCACAGAAACTTAAAAAAAATCACAAATATAATAATAAATCATCTCATCTGGTTCACAATTATTCAACACCTAGGGCAGGAAAATCGTCGAAAACAAGAAAGAAGAAGGAGGAGGAGGAAGGATCGAATTCAATTCCTGGCAAAGAGAATAGGAGTATCGTCATCATCATCGTCGCTCAAAGCGGCACCAGGTTGAGAAGTCTTACCGACGACAGGGGAGGAGGAAGGGGAAGAGGAAGCAGAGGCAAGGACGAGCGTCAAGCAGCCTTCGCTCCAGGATCGACGAATGGGATAGGAGATGGATTTGGACTTGGAATGGGAGCAGTGAGGAGGTTGACGGCGGGATTTGTGGAGAGCGCAGCCGCAGTTGCGGTGGTATGGACGACGGTGGATTTCGGAGTCGCAGCCGGCGATGCAAGCCTCGTAGACGGGGCGGAGGAGGCCGTCGGCGGCCATGGAAGAAGAGGAATCGGACCACCGCGTGCGGAAGGTGTTTGGAGAAAAGCGTGA

Protein sequence

MIQKQERIQYFFFRSQKLKKNHKYNNKSSHLVHNYSTPRAGKSSKTRKKKEEEEGSNSIPGKENRSIVIIIVAQSGTRLRSLTDDRGGGRGRGSRGKDERQAAFAPGSTNGIGDGFGLGMGAVRRLTAGFVESAAAVAVVWTTVDFGVAAGDASLVDGAEEAVGGHGRRGIGPPRAEGVWRKA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi06G001578Bhi06G001578gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi06M001578.exon1Bhi06M001578.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi06M001578cds.Bhi06M001578CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi06M001578Bhi06M001578-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..108