Bhi06M000696 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06M000696
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Protein Ycf2
Location	chr6 : 19613506 .. 19613894 (-)
Sequence length	389

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCACCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCTTATTGGGCTAGGTCATTCTGGGACAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGAAGTTCTTGCAGAGTAGAATCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGACTTTTTTCAAATAAGCCAATCCAAAATAGTATCTTTTAAGTCACTCTACAATCCTTTGATTCTATGTAAGGCATTTGAGAAGACACATATTTTGAAGCTTGAAGGAGATCAACAATGA

mRNA sequence

GGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCACCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCTTATTGGGCTAGGTCATTCTGGGACAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGAAGTTCTTGCAGAGTAGAATCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGACTTTTTTCAAATAAGCCAATCCAAAATAGTATCTTTTAAGTCACTCTACAATCCTTTGATTCTATGTAAGGCATTTGAGAAGACACATATTTTGAAGCTTGAAGGAGATCAACAATGA

Coding sequence (CDS)

GGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCACCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCTTATTGGGCTAGGTCATTCTGGGACAAGCGGATCATTTATGATGAAGAGGATGAGCTTCAAGAGAATGATTCGAAGTTCTTGCAGAGTAGAATCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGACTTTTTTCAAATAAGCCAATCCAAAATAGTATCTTTTAAGTCACTCTACAATCCTTTGATTCTATGTAAGGCATTTGAGAAGACACATATTTTGAAGCTTGAAGGAGATCAACAATGA

Protein sequence

EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDEEDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQSKIVSFKSLYNPLILCKAFEKTHILKLEGDQQ

Homology

[Close]

BLAST of Bhi06M000696 vs. Swiss-Prot
Match: sp|B1A978|YCF2_CARPA (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.7e-46
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2074 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2133

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            +DELQ NDS+FLQS  VQYQTRDRSSKEQ FF+ISQ
Sbjct: 2134 KDELQANDSEFLQSGTVQYQTRDRSSKEQGFFRISQ 2169

[Close]

BLAST of Bhi06M000696 vs. Swiss-Prot
Match: sp|Q0G9Q1|YCF2_DAUCA (Protein Ycf2 OS=Daucus carota OX=4039 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.7e-46
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIWHPWG LFDCIERPNELGFPYW+RSF  KRI+YDE
Sbjct: 1851 EGEGALDPQQIEEDLFNHIVWAPRIWHPWGILFDCIERPNELGFPYWSRSFRGKRILYDE 1910

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+ISQ
Sbjct: 1911 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQ 1946

[Close]

BLAST of Bhi06M000696 vs. Swiss-Prot
Match: sp|Q2QD30|YCF2_CUCSA (Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-45
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELG PYWARSF  KRIIYDE
Sbjct: 1762 EGEGVLDPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNELGVPYWARSFRGKRIIYDE 1821

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQ FF I+Q
Sbjct: 1822 EDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQ 1857

[Close]

BLAST of Bhi06M000696 vs. Swiss-Prot
Match: sp|Q49KT6|YCF2_EUCGG (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-45
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPN LGFPYWARSF  KRIIYDE
Sbjct: 2056 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARSFRGKRIIYDE 2115

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            ++ELQENDS+FLQS  +QYQTRDRSSKEQ FF+ISQ
Sbjct: 2116 KEELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQ 2151

[Close]

BLAST of Bhi06M000696 vs. Swiss-Prot
Match: sp|P08973|YCF2_SPIOL (Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-45
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIW+PWGFLFDCIERPNELGFPYWARSF  KR IYD+
Sbjct: 1891 EGEGALDPQQIEEDLFNHIVWAPRIWNPWGFLFDCIERPNELGFPYWARSFRGKRSIYDK 1950

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+ISQ
Sbjct: 1951 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQ 1986

[Close]

BLAST of Bhi06M000696 vs. TAIR10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core)

HSP 1 Score: 166.8 bits (421), Expect = 8.9e-42
Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW P GFLFDCIERPNELGFPY A SF  KRIIYDE
Sbjct: 2070 EGEGVLDPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSAGSFRGKRIIYDE 2129

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            + ELQENDS+FLQS  +QYQ RDRSSKEQ FF+ISQ
Sbjct: 2130 KYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQ 2165

[Close]

BLAST of Bhi06M000696 vs. TAIR10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core)

HSP 1 Score: 166.8 bits (421), Expect = 8.9e-42
Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW P GFLFDCIERPNELGFPY A SF  KRIIYDE
Sbjct: 2070 EGEGVLDPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSAGSFRGKRIIYDE 2129

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            + ELQENDS+FLQS  +QYQ RDRSSKEQ FF+ISQ
Sbjct: 2130 KYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQ 2165

[Close]

BLAST of Bhi06M000696 vs. TrEMBL
Match: tr|A0A2S0STM0|A0A2S0STM0_GRISI (Uncharacterized protein OS=Griffonia simplicifolia OX=3850 GN=ycf2 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.4e-46
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSFW KRIIYDE
Sbjct: 2049 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFWGKRIIYDE 2108

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+I+Q
Sbjct: 2109 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRITQ 2144

[Close]

BLAST of Bhi06M000696 vs. TrEMBL
Match: tr|A0A291IAS5|A0A291IAS5_9ROSI (Protein Ycf2 OS=Gynostemma pentagynum OX=555432 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2055 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2114

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQDFF+ISQ
Sbjct: 2115 EDELQENDSEFLQSGTVQYQTRDRSSKEQDFFRISQ 2150

[Close]

BLAST of Bhi06M000696 vs. TrEMBL
Match: tr|G0YEK9|G0YEK9_9CARY (Protein Ycf2 OS=Rhabdodendron amazonicum OX=63102 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-45
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2064 EGEGALDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2123

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQ FF+ISQ
Sbjct: 2124 EDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQ 2159

[Close]

BLAST of Bhi06M000696 vs. TrEMBL
Match: tr|G0YEI1|G0YEI1_NEPAL (Protein Ycf2 OS=Nepenthes alata OX=4376 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.1e-45
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2057 EGEGALDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2116

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+ISQ
Sbjct: 2117 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQ 2152

[Close]

BLAST of Bhi06M000696 vs. TrEMBL
Match: tr|A0A2I6C0C4|A0A2I6C0C4_LAGSI (Protein Ycf2 OS=Lagenaria siceraria OX=3668 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.9e-45
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2058 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2117

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQ FF+ISQ
Sbjct: 2118 EDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQ 2153

[Close]

BLAST of Bhi06M000696 vs. NCBI nr
Match: YP_009486587.1 (hypothetical protein RF2 (chloroplast) [Griffonia simplicifolia] >YP_009486604.1 hypothetical protein RF2 (chloroplast) [Griffonia simplicifolia] >AWB12810.1 hypothetical protein RF2 (chloroplast) [Griffonia simplicifolia] >AWB12827.1 hypothetical protein RF2 (chloroplast) [Griffonia simplicifolia])

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSFW KRIIYDE
Sbjct: 2049 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFWGKRIIYDE 2108

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+I+Q
Sbjct: 2109 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRITQ 2144

[Close]

BLAST of Bhi06M000696 vs. NCBI nr
Match: YP_009440041.1 (hypothetical chloroplast RF2 (chloroplast) [Gynostemma pentagynum] >YP_009440021.1 hypothetical chloroplast RF2 (chloroplast) [Gynostemma pentagynum] >ATG86801.1 hypothetical chloroplast RF2 (chloroplast) [Gynostemma pentagynum] >ATG86802.1 hypothetical chloroplast RF2 (chloroplast) [Gynostemma pentagynum])

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2055 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2114

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQDFF+ISQ
Sbjct: 2115 EDELQENDSEFLQSGTVQYQTRDRSSKEQDFFRISQ 2150

[Close]

BLAST of Bhi06M000696 vs. NCBI nr
Match: AEK78268.1 (hypothetical chloroplast RF2 (plastid) [Rhabdodendron amazonicum])

HSP 1 Score: 190.3 bits (482), Expect = 4.1e-45
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2064 EGEGALDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2123

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  VQYQTRDRSSKEQ FF+ISQ
Sbjct: 2124 EDELQENDSEFLQSGTVQYQTRDRSSKEQGFFRISQ 2159

[Close]

BLAST of Bhi06M000696 vs. NCBI nr
Match: AEK78240.1 (hypothetical chloroplast RF2 (plastid) [Nepenthes alata])

HSP 1 Score: 189.1 bits (479), Expect = 9.2e-45
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEG LDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSF  KRIIYDE
Sbjct: 2057 EGEGALDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFRGKRIIYDE 2116

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQS  +QYQTRDRSSKEQ FF+ISQ
Sbjct: 2117 EDELQENDSEFLQSGTMQYQTRDRSSKEQGFFRISQ 2152

[Close]

BLAST of Bhi06M000696 vs. NCBI nr
Match: AHY33430.1 (hypothetical chloroplast RF21 (chloroplast) [Robinia pseudoacacia] >AHY33448.1 hypothetical chloroplast RF21 (chloroplast) [Robinia pseudoacacia])

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1    EGEGVLDPQQIEEDLFNHIVWAPRIWHPWGFLFDCIERPNELGFPYWARSFWDKRIIYDE 60
            EGEGVLDPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNELGFPYWARSF DKRIIYDE
Sbjct: 2048 EGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARSFRDKRIIYDE 2107

Query: 61   EDELQENDSKFLQSRIVQYQTRDRSSKEQDFFQISQ 97
            EDELQENDS+FLQ   +QYQTRDRSSKEQ FF+ISQ
Sbjct: 2108 EDELQENDSEFLQGGTMQYQTRDRSSKEQGFFRISQ 2143

The following BLAST results are available for this feature:

BLAST of Bhi06M000696 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B1A978\|YCF2_CARPA	5.7e-46	89.58	Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1	[more]
sp\|Q0G9Q1\|YCF2_DAUCA	5.7e-46	87.50	Protein Ycf2 OS=Daucus carota OX=4039 GN=ycf2-A PE=3 SV=1	[more]
sp\|Q2QD30\|YCF2_CUCSA	1.7e-45	89.58	Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1	[more]
sp\|Q49KT6\|YCF2_EUCGG	2.8e-45	87.50	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
sp\|P08973\|YCF2_SPIOL	2.8e-45	87.50	Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2	[more]

BLAST of Bhi06M000696 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00860.1	8.9e-42	84.38	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	8.9e-42	84.38	Chloroplast Ycf2;ATPase, AAA type, core	[more]

BLAST of Bhi06M000696 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2S0STM0\|A0A2S0STM0_GRISI	9.4e-46	90.63	Uncharacterized protein OS=Griffonia simplicifolia OX=3850 GN=ycf2 PE=4 SV=1	[more]
tr\|A0A291IAS5\|A0A291IAS5_9ROSI	1.2e-45	92.71	Protein Ycf2 OS=Gynostemma pentagynum OX=555432 GN=ycf2 PE=3 SV=1	[more]
tr\|G0YEK9\|G0YEK9_9CARY	2.7e-45	91.67	Protein Ycf2 OS=Rhabdodendron amazonicum OX=63102 GN=ycf2 PE=3 SV=1	[more]
tr\|G0YEI1\|G0YEI1_NEPAL	6.1e-45	90.63	Protein Ycf2 OS=Nepenthes alata OX=4376 GN=ycf2 PE=3 SV=1	[more]
tr\|A0A2I6C0C4\|A0A2I6C0C4_LAGSI	7.9e-45	91.67	Protein Ycf2 OS=Lagenaria siceraria OX=3668 GN=ycf2 PE=3 SV=1	[more]

BLAST of Bhi06M000696 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009486587.1	1.4e-45	90.63	hypothetical protein RF2 (chloroplast) [Griffonia simplicifolia] >YP_009486604.1...	[more]
YP_009440041.1	1.9e-45	92.71	hypothetical chloroplast RF2 (chloroplast) [Gynostemma pentagynum] >YP_009440021...	[more]
AEK78268.1	4.1e-45	91.67	hypothetical chloroplast RF2 (plastid) [Rhabdodendron amazonicum]	[more]
AEK78240.1	9.2e-45	90.63	hypothetical chloroplast RF2 (plastid) [Nepenthes alata]	[more]
AHY33430.1	1.2e-44	90.63	hypothetical chloroplast RF21 (chloroplast) [Robinia pseudoacacia] >AHY33448.1 h...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast

Vocabulary: **INTERPRO**
Term	Definition
IPR008543	Uncharacterised_Ycf2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi06G000696	Bhi06G000696	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi06M000696	cds.Bhi06M000696	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M000696.exon1	Bhi06M000696.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi06M000696	Bhi06M000696-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078	FAMILY NOT NAMED	coord: 1..96