Bhi06M000051 (mRNA) Wax gourd

NameBhi06M000051
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 1289920 .. 1290493 (+)
Sequence length266
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATATTCACCAAGTCTTTCTCAAGTTCTAAGCTCCTTACTTTTGTGTTTTCAAAATTCATTACAAAATAAATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGTTCACTTAGTCATAGCTATTTAAATTTAACCACACCATCATTTTATCGATTACATATTAGATTATTATATTTTTAAATACTGTATGGTAATTGAATATAAGATGAATGTGATAACAGTTGTCTAATATAGTAATTTCATTCTCAATAGATTTCGTGTTATCTTATCCTTCCCTTGTTTATTCTTTTATTTAAAAGGTTCTATATTGCTTTTATTGGATATCGTTGGAGATGCCCCATATTGTTTGGTTGCTATTTTATGTGATTAAGGAGTGATAAGGATAACATGTTAGTTTGTGTCATTATGTAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA

mRNA sequence

CTATATTCACCAAGTCTTTCTCAAGTTCTAAGCTCCTTACTTTTGTGTTTTCAAAATTCATTACAAAATAAATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA

Coding sequence (CDS)

ATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA

Protein sequence

MDNSQKMSYHAGEAKGQAQEKVSNMMDKANDAAQSTKESMQEAGQQIKAKAQGAAEAVKDAVNK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi06G000051Bhi06G000051gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi06M000051.utr5p1Bhi06M000051.utr5p1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi06M000051.exon1Bhi06M000051.exon1exon
Bhi06M000051.exon2Bhi06M000051.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi06M000051cds.Bhi06M000051CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi06M000051Bhi06M000051-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableGENE3DG3DSA:1.20.120.20coord: 2..64
e-value: 1.5E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..64
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR34191:SF4SUBFAMILY NOT NAMEDcoord: 1..63