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Name | Bhi06M000051 |
Type | mRNA |
Organism | Benincasa hispida (Wax gourd) |
Description | Unknown protein |
Location | chr6 : 1289920 .. 1290493 (+) |
Sequence length | 266 |
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. CTATATTCACCAAGTCTTTCTCAAGTTCTAAGCTCCTTACTTTTGTGTTTTCAAAATTCATTACAAAATAAATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGTTCACTTAGTCATAGCTATTTAAATTTAACCACACCATCATTTTATCGATTACATATTAGATTATTATATTTTTAAATACTGTATGGTAATTGAATATAAGATGAATGTGATAACAGTTGTCTAATATAGTAATTTCATTCTCAATAGATTTCGTGTTATCTTATCCTTCCCTTGTTTATTCTTTTATTTAAAAGGTTCTATATTGCTTTTATTGGATATCGTTGGAGATGCCCCATATTGTTTGGTTGCTATTTTATGTGATTAAGGAGTGATAAGGATAACATGTTAGTTTGTGTCATTATGTAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA mRNA sequence CTATATTCACCAAGTCTTTCTCAAGTTCTAAGCTCCTTACTTTTGTGTTTTCAAAATTCATTACAAAATAAATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA Coding sequence (CDS) ATGGATAATTCCCAAAAGATGAGCTACCATGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGATAAGGCAAACGATGCAGCCCAGTCGACTAAGGAATCAATGCAAGAAGCAGGACAACAGATAAAGGCCAAAGCACAAGGAGCCGCTGAAGCTGTTAAGGATGCAGTTAACAAATGA Protein sequence MDNSQKMSYHAGEAKGQAQEKVSNMMDKANDAAQSTKESMQEAGQQIKAKAQGAAEAVKDAVNK
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi06M000051.utr5p1 | Bhi06M000051.utr5p1 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi06M000051.exon1 | Bhi06M000051.exon1 | exon |
Bhi06M000051.exon2 | Bhi06M000051.exon2 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Bhi06M000051 | cds.Bhi06M000051 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Bhi06M000051 | Bhi06M000051-protein | polypeptide |
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 26..46 |
None | No IPR available | GENE3D | G3DSA:1.20.120.20 | | coord: 2..64 e-value: 1.5E-5 score: 26.7 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..46 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..64 |
None | No IPR available | PANTHER | PTHR34191 | FAMILY NOT NAMED | coord: 1..63 |
None | No IPR available | PANTHER | PTHR34191:SF4 | SUBFAMILY NOT NAMED | coord: 1..63 |
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