Bhi05M000593 (mRNA) Wax gourd

NameBhi05M000593
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 24268177 .. 24269414 (-)
Sequence length1085
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGAGTATTGGGTTTTGTCCAGATTAACGATTGGTTACTTGGCCTGACATTTCGTAATACATATCACATAGAACGTTTATTATAAATATATTATGAAAGAAGTTACATTGACATTGTAGTAGTTTATTTGATAAGCTAAAATAGAAAAGTTCAAACAACTGAAAATTCAACGTGAAAGTAAAGATTATGCTTTAGAGTCTGAACAACCAAAACATTAGTATTTTGACTGTGGAGAAGGTTAAACAACCGGTTGAACTTTGGGACGAGGTGATGAAATAATTATTGGAATGCTAAGACCAGGTGGAGAAGCAATTGGCGATGTTATCGGACGAGGGGGTGAAGCCTTTGGTGGAATTCTAGGATTAGGCAGTGAAGTTGGCGGAATGATGGGACGAGTGGGTGAAGCTATAGGTGAAATATTGGGTCAAGGGGATGAAGCTATCGGTGAAATATTAGGACGTGGGGGTGAAGCTGTTGGTGAAATGATTGGACGAGTGGGTGAAGGCAATGGTGAAGGAGGTGGAGGTGATGTTTTTGGTGGAAAAGTAGGTGGAGGGAGAGGTCGTGGGATCAGAGGAGGAGGGGGTTTAGGCGTTTGTGGTATAGTTGGTGGAGGAGGACGAAGAGGAATTATTGGTGGTAATATAATAGGAGGAAGAGGAGGGAGACGAATAGGAGGTAAAGGAGGGAGACGAATAGGAGGGAGAGGAGTGAGCGGAGGAATAGGAGGGAGACGAATAGGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGAGAGACGAATAGGAGGGAGACGAATGGGAGGAAGAGGAGGGAGACGAATAGGAGGAAGAGGAGAGAGACGAATAGGAGGGAGAGGAGTGAGCGGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGACGAATAGGAGTTAAAGGAGGGAGCGGAGGAAGGGGAAAGAGACGAATAGGAGGGAGAGGAGTGAGCAGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGAAGAGGAAGAGGTGGGAGAAAAAATGGAGGTAATGTTGAAAATTTTACGGGCAGAGAAAAAGATTGTGAATTCTTCCCATGTTTTGACGATGCTGATGTTTGTTGGAGATGAAGGGAAACTTCATTCCCCTTAATGCCCAAACAACATAAACTCACAATTAGACCAAACAAAAGTAAGGTCTTGTAGGAAGCCATGATATATGATTATCTCAAGCTTCC

mRNA sequence

GGTGAGTATTGGGTTTTGTCCAGATTAACGATTGGTTACTTGGCCTGACATTTCGTAATACATATCACATAGAACGTTTATTATAAATATATTATGAAAGAAGTTACATTGACATTGTAGTAGTTTATTTGATAAGCTAAAATAGAAAAGTTCAAACAACTGAAAATTCAACGTGAAAGTAAAGATTATGCTTTAGAGTCTGAACAACCAAAACATTAGTATTTTGACTGTGGAGAAGGTTAAACAACCGGTTGAACTTTGGGACGAGGTGATGAAATAATTATTGGAATGCTAAGACCAGGTGGAGAAGCAATTGGCGATGTTATCGGACGAGGGGGTGAAGCCTTTGGTGGAATTCTAGGATTAGGCAGTGAAGTTGGCGGAATGATGGGACGAGTGGGTGAAGCTATAGGTGAAATATTGGGTCAAGGGGATGAAGCTATCGGTGAAATATTAGGACGTGGGGGTGAAGCTGTTGGTGAAATGATTGGACGAGTGGGTGAAGGCAATGGTGAAGGAGGTGGAGGTGATGTTTTTGGTGGAAAAGTAGGTGGAGGGAGAGGTCGTGGGATCAGAGGAGGAGGGGGTTTAGGCGTTTGTGGTATAGTTGGTGGAGGAGGACGAAGAGGAATTATTGGTGGTAATATAATAGGAGGAAGAGGAGGGAGACGAATAGGAGGAAGAGGAGAGAGACGAATAGGAGGGAGAGGAGTGAGCGGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGACGAATAGGAGTTAAAGGAGGGAGCGGAGGAAGGGGAAAGAGACGAATAGGAGGGAGAGGAGTGAGCAGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGAAGAGGAAGAGGTGGGAGAAAAAATGGAGGTAATGTTGAAAATTTTACGGGCAGAGAAAAAGATTGTGAATTCTTCCCATGTTTTGACGATGCTGATGTTTGTTGGAGATGAAGGGAAACTTCATTCCCCTTAATGCCCAAACAACATAAACTCACAATTAGACCAAACAAAAGTAAGGTCTTGTAGGAAGCCATGATATATGATTATCTCAAGCTTCC

Coding sequence (CDS)

ATGCTAAGACCAGGTGGAGAAGCAATTGGCGATGTTATCGGACGAGGGGGTGAAGCCTTTGGTGGAATTCTAGGATTAGGCAGTGAAGTTGGCGGAATGATGGGACGAGTGGGTGAAGCTATAGGTGAAATATTGGGTCAAGGGGATGAAGCTATCGGTGAAATATTAGGACGTGGGGGTGAAGCTGTTGGTGAAATGATTGGACGAGTGGGTGAAGGCAATGGTGAAGGAGGTGGAGGTGATGTTTTTGGTGGAAAAGTAGGTGGAGGGAGAGGTCGTGGGATCAGAGGAGGAGGGGGTTTAGGCGTTTGTGGTATAGTTGGTGGAGGAGGACGAAGAGGAATTATTGGTGGTAATATAATAGGAGGAAGAGGAGGGAGACGAATAGGAGGAAGAGGAGAGAGACGAATAGGAGGGAGAGGAGTGAGCGGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGACGAATAGGAGTTAAAGGAGGGAGCGGAGGAAGGGGAAAGAGACGAATAGGAGGGAGAGGAGTGAGCAGAGGGAGAGGAGGGAGACGAATAGGAGGAAGAGGAGGGAGAAGAGGAAGAGGTGGGAGAAAAAATGGAGGTAATGTTGAAAATTTTACGGGCAGAGAAAAAGATTGTGAATTCTTCCCATGTTTTGACGATGCTGATGTTTGTTGGAGATGA

Protein sequence

MLRPGGEAIGDVIGRGGEAFGGILGLGSEVGGMMGRVGEAIGEILGQGDEAIGEILGRGGEAVGEMIGRVGEGNGEGGGGDVFGGKVGGGRGRGIRGGGGLGVCGIVGGGGRRGIIGGNIIGGRGGRRIGGRGERRIGGRGVSGGRGGRRIGGRGGRRIGVKGGSGGRGKRRIGGRGVSRGRGGRRIGGRGGRRGRGGRKNGGNVENFTGREKDCEFFPCFDDADVCWR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi05G000593Bhi05G000593gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi05M000593.utr3p1Bhi05M000593.utr3p1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi05M000593.exon2Bhi05M000593.exon2exon
Bhi05M000593.exon1Bhi05M000593.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi05M000593cds.Bhi05M000593CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi05M000593.utr5p1Bhi05M000593.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi05M000593Bhi05M000593-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..205