Bhi05M000394 (mRNA) Wax gourd

NameBhi05M000394
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 13838078 .. 13838938 (+)
Sequence length534
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTTGTGGTCCTATTGAGGATGTGGGTCGAGAACAAGTTGATGGACCTACGACGGGTGGCTGTGTTGCAAATTCAGATAACACCGTGGGTAAGCTACATGTAGTACGCCCTCAGGCCTAAATACTTCCACCAGTGATGACCACAACTAGTGGATCACGGATGACATGTGAATGCAATAAGCACTTACAGCACTTGGAAGGGAAGTTAGATCGTATTAAGTCATCCTTTATGGCTAAGCTGAAGGCCAAAAAGGAAATGTTGATGTTGATTATGAAGGTATGTTACATAAAATATTCTTCAATTATGTAGTTATTCTTGTTTTCTTATTTCATTTACATTATTTATAGGATAAATCGGTCGAATCACAATAGTATTATGACGTTGGAGAAGGTCCACATTTTTTCGGGACCCACCTACTGAGAATCAACCTACTGAGGATCCACTGGTTGATGATCCACCTACCGAGGACCCAGATGTGGGGGACACAACTGCTAAGTTCGTTGTTCACGGTGAGGATCCACCTGTTGGGGATCCCCCTTCTACCCATGATGGTGAAGGTGGTGTCCCCATAGAGATATCATTAGGGGACAAAGATACGACTAGTCCATCAGTATCTACACTAATAAAGCTGAAGGATGAGGTATGGTATTTTGATGTTCGTATAATTGATTATTTACAGTTTATGCTATTATTTGATGACAAATATTTATGAATTTTGCAGCCACTGGACGATGACAACGAAGTGATTCCATTGTCTCAGTTTTTAGATGTGGTCCATAGGGAAAGGACCAGCAGGAAAAGGACAGTCCCATGGAAACTTCATATTCCTATTGGAGTTGAACCCGTTGAGAACTAG

mRNA sequence

ATGTTCTTTGTGGTCCTATTGAGGATGTGGGTCGAGAACAAGTTGATGGACCTACGACGGGTGGCTGTGTTGCAAATTCAGATAACACCGTGGCACTTGGAAGGGAAGTTAGATCGTATTAAGTCATCCTTTATGGCTAAGCTGAAGGCCAAAAAGGAAATGTTGATGTTGATTATGAAGAATCAACCTACTGAGGATCCACTGGTTGATGATCCACCTACCGAGGACCCAGATGTGGGGGACACAACTGCTAAGTTCGTTGTTCACGGTGAGGATCCACCTGTTGGGGATCCCCCTTCTACCCATGATGGTGAAGGTGGTGTCCCCATAGAGATATCATTAGGGGACAAAGATACGACTAGTCCATCAGTATCTACACTAATAAAGCTGAAGGATGAGCCACTGGACGATGACAACGAAGTGATTCCATTGTCTCAGTTTTTAGATGTGGTCCATAGGGAAAGGACCAGCAGGAAAAGGACAGTCCCATGGAAACTTCATATTCCTATTGGAGTTGAACCCGTTGAGAACTAG

Coding sequence (CDS)

ATGTTCTTTGTGGTCCTATTGAGGATGTGGGTCGAGAACAAGTTGATGGACCTACGACGGGTGGCTGTGTTGCAAATTCAGATAACACCGTGGCACTTGGAAGGGAAGTTAGATCGTATTAAGTCATCCTTTATGGCTAAGCTGAAGGCCAAAAAGGAAATGTTGATGTTGATTATGAAGAATCAACCTACTGAGGATCCACTGGTTGATGATCCACCTACCGAGGACCCAGATGTGGGGGACACAACTGCTAAGTTCGTTGTTCACGGTGAGGATCCACCTGTTGGGGATCCCCCTTCTACCCATGATGGTGAAGGTGGTGTCCCCATAGAGATATCATTAGGGGACAAAGATACGACTAGTCCATCAGTATCTACACTAATAAAGCTGAAGGATGAGCCACTGGACGATGACAACGAAGTGATTCCATTGTCTCAGTTTTTAGATGTGGTCCATAGGGAAAGGACCAGCAGGAAAAGGACAGTCCCATGGAAACTTCATATTCCTATTGGAGTTGAACCCGTTGAGAACTAG

Protein sequence

MFFVVLLRMWVENKLMDLRRVAVLQIQITPWHLEGKLDRIKSSFMAKLKAKKEMLMLIMKNQPTEDPLVDDPPTEDPDVGDTTAKFVVHGEDPPVGDPPSTHDGEGGVPIEISLGDKDTTSPSVSTLIKLKDEPLDDDNEVIPLSQFLDVVHRERTSRKRTVPWKLHIPIGVEPVEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi05G000394Bhi05G000394gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi05M000394.exon1Bhi05M000394.exon1exon
Bhi05M000394.exon2Bhi05M000394.exon2exon
Bhi05M000394.exon3Bhi05M000394.exon3exon
Bhi05M000394.exon4Bhi05M000394.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi05M000394cds.Bhi05M000394CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi05M000394Bhi05M000394-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..121