Bhi04M001516 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCAATGGTTTGGAATTTCCAAGAAGAAGTCACAATCCAAAACGTCGATTGCAACATCTTCTTATGTATATTCAAAGCACCAAATGATAAGCAAACGGTTCTAGAAAACGGGCCATGGTTCTTTGACAAAGAGCTGCTGGTTTTCGAACACCCACCAAGAGGAACCTGCAAGTTCATAGACCTGGACTTCCAATACGTCTCTTTCTGGGTTCATTTTCACCACCTTCCAATGGCTTGCTTCTCGAGGAAAATGGCCATAGTATTTGGGAATATGGTTGGGAGGTTCGAAACGGTTGAAACCGATGAGGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTGAGTGTTGATGTGAAAAAGCCTTTGAGAAGAGTGGTGAAGTTGAAAGTTGGATCTATGGGGGAAGAAATTTTGATACCTATCACTTATGAAAAGCTCATGGATTTCTGCTATCAATGTGGAAAGCTTGGGCACGTCCTCGACGCCTGCAATTCTTCTTCTGATAGTGAAGAGAAAGACGATTTATGCTATAAATGTGGGAAGGTAGGACTCGTCCTTCAAGATTGCAATTCGCGTTTTGGCACTGGAGAGGAAGACTTACAGTATGGAGACTGGCCTAGAGGGATGAGAAGAGAAGGGGATGAGAAGTTTGAAGGGATAGAGTTCGGAAAGGGGGAGGGCTGGGAAGAGGACTACAATGACAGTGATAATCAGGAACTTCAGGTGGTCAGAATCAGCCCCGAATGGTTAGCGGGGCTCTCCGGAATGTGA ATGATGCCAATGGTTTGGAATTTCCAAGAAGAAGTCACAATCCAAAACGTCGATTGCAACATCTTCTTATGTATATTCAAAGCACCAAATGATAAGCAAACGGTTCTAGAAAACGGGCCATGGTTCTTTGACAAAGAGCTGCTGGTTTTCGAACACCCACCAAGAGGAACCTGCAAGTTCATAGACCTGGACTTCCAATACGTCTCTTTCTGGGTTCATTTTCACCACCTTCCAATGGCTTGCTTCTCGAGGAAAATGGCCATAGTATTTGGGAATATGGTTGGGAGGTTCGAAACGGTTGAAACCGATGAGGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTGAGTGTTGATGTGAAAAAGCCTTTGAGAAGAGTGGTGAAGTTGAAAGTTGGATCTATGGGGGAAGAAATTTTGATACCTATCACTTATGAAAAGCTCATGGATTTCTGCTATCAATGTGGAAAGCTTGGGCACGTCCTCGACGCCTGCAATTCTTCTTCTGATAGTGAAGAGAAAGACGATTTATGCTATAAATGTGGGAAGGTAGGACTCGTCCTTCAAGATTGCAATTCGCGTTTTGGCACTGGAGAGGAAGACTTACAGTATGGAGACTGGCCTAGAGGGATGAGAAGAGAAGGGGATGAGAAGTTTGAAGGGATAGAGTTCGGAAAGGGGGAGGGCTGGGAAGAGGACTACAATGACAGTGATAATCAGGAACTTCAGGTGGTCAGAATCAGCCCCGAATGGTTAGCGGGGCTCTCCGGAATGTGA ATGATGCCAATGGTTTGGAATTTCCAAGAAGAAGTCACAATCCAAAACGTCGATTGCAACATCTTCTTATGTATATTCAAAGCACCAAATGATAAGCAAACGGTTCTAGAAAACGGGCCATGGTTCTTTGACAAAGAGCTGCTGGTTTTCGAACACCCACCAAGAGGAACCTGCAAGTTCATAGACCTGGACTTCCAATACGTCTCTTTCTGGGTTCATTTTCACCACCTTCCAATGGCTTGCTTCTCGAGGAAAATGGCCATAGTATTTGGGAATATGGTTGGGAGGTTCGAAACGGTTGAAACCGATGAGGAAGGAATGTGTTGGGGAAGAACTATGAGAGTTAGAGTGAGTGTTGATGTGAAAAAGCCTTTGAGAAGAGTGGTGAAGTTGAAAGTTGGATCTATGGGGGAAGAAATTTTGATACCTATCACTTATGAAAAGCTCATGGATTTCTGCTATCAATGTGGAAAGCTTGGGCACGTCCTCGACGCCTGCAATTCTTCTTCTGATAGTGAAGAGAAAGACGATTTATGCTATAAATGTGGGAAGGTAGGACTCGTCCTTCAAGATTGCAATTCGCGTTTTGGCACTGGAGAGGAAGACTTACAGTATGGAGACTGGCCTAGAGGGATGAGAAGAGAAGGGGATGAGAAGTTTGAAGGGATAGAGTTCGGAAAGGGGGAGGGCTGGGAAGAGGACTACAATGACAGTGATAATCAGGAACTTCAGGTGGTCAGAATCAGCCCCGAATGGTTAGCGGGGCTCTCCGGAATGTGA MMPMVWNFQEEVTIQNVDCNIFLCIFKAPNDKQTVLENGPWFFDKELLVFEHPPRGTCKFIDLDFQYVSFWVHFHHLPMACFSRKMAIVFGNMVGRFETVETDEEGMCWGRTMRVRVSVDVKKPLRRVVKLKVGSMGEEILIPITYEKLMDFCYQCGKLGHVLDACNSSSDSEEKDDLCYKCGKVGLVLQDCNSRFGTGEEDLQYGDWPRGMRREGDEKFEGIEFGKGEGWEEDYNDSDNQELQVVRISPEWLAGLSGM
BLAST of Bhi04M001516 vs. TAIR10
Match: AT3G31430.1 (unknown protein) HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10 Identity = 45/166 (27.11%), Postives = 72/166 (43.37%), Query Frame = 0
BLAST of Bhi04M001516 vs. TAIR10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding) HSP 1 Score: 55.5 bits (132), Expect = 5.8e-08 Identity = 36/166 (21.69%), Postives = 68/166 (40.96%), Query Frame = 0
BLAST of Bhi04M001516 vs. TrEMBL
Match: tr|A0A1S8AC25|A0A1S8AC25_CITLI (Uncharacterized protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30 Identity = 63/166 (37.95%), Postives = 101/166 (60.84%), Query Frame = 0
BLAST of Bhi04M001516 vs. TrEMBL
Match: tr|A0A2P5DYF4|A0A2P5DYF4_PARAD (Zinc knuckle CX2CX4HX4C OS=Parasponia andersonii OX=3476 GN=PanWU01x14_019600 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26 Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = 0
BLAST of Bhi04M001516 vs. TrEMBL
Match: tr|A0A2I4F5K7|A0A2I4F5K7_9ROSI (uncharacterized protein At4g02000-like OS=Juglans regia OX=51240 GN=LOC108995767 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25 Identity = 57/167 (34.13%), Postives = 88/167 (52.69%), Query Frame = 0
BLAST of Bhi04M001516 vs. TrEMBL
Match: tr|A0A2I4GBZ4|A0A2I4GBZ4_9ROSI (uncharacterized protein LOC109006560 OS=Juglans regia OX=51240 GN=LOC109006560 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25 Identity = 62/176 (35.23%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of Bhi04M001516 vs. TrEMBL
Match: tr|A0A2I4HQ86|A0A2I4HQ86_9ROSI (uncharacterized protein LOC109020332 OS=Juglans regia OX=51240 GN=LOC109020332 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24 Identity = 71/242 (29.34%), Postives = 106/242 (43.80%), Query Frame = 0
BLAST of Bhi04M001516 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 147.5 bits (371), Expect = 6.2e-32 Identity = 64/165 (38.79%), Postives = 101/165 (61.21%), Query Frame = 0
BLAST of Bhi04M001516 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 69/170 (40.59%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of Bhi04M001516 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30 Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = 0
BLAST of Bhi04M001516 vs. NCBI nr
Match: XP_024041282.1 (uncharacterized protein LOC112098886 [Citrus clementina]) HSP 1 Score: 142.1 bits (357), Expect = 2.6e-30 Identity = 65/165 (39.39%), Postives = 103/165 (62.42%), Query Frame = 0
BLAST of Bhi04M001516 vs. NCBI nr
Match: XP_024953751.1 (uncharacterized protein LOC112498094 [Citrus sinensis]) HSP 1 Score: 141.4 bits (355), Expect = 4.5e-30 Identity = 64/166 (38.55%), Postives = 102/166 (61.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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