Bhi04M000251 (mRNA) Wax gourd

NameBhi04M000251
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 6663794 .. 6664954 (+)
Sequence length1161
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTGACATTTGACAATTTCTGTTCCTTTAAGAACAAACACTGTATTTGACGACGGACTTCTATGAACTAAAGTATCAACATCTTCCTCTTCTCTCTGTGCAAACTACAACTACAAAAAGAAAACTTTACAGTGATACCCCATTCCCATCAAAACAAAAACATGAACAGAGCAAAACCCATTTCAGAAATTCGCAGGCTTCTTATAAATCAAACCCGAACAATTTTCCTTGTAGAATTTCACGAACAGCAAAAGGATAACGGAATTAAGCACAGAATTGCAAGCCCAAGCGCCAATGCCGTTGCACCCGCCTTTCAGAACGTGAAATGAATACATCCCAAGATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGATTGGGAGTGGCTCCATCTGAAATTGACAATGGAAGGGTGCTCCGACAGCCAGTATCGAGAAACCGTCGGCATTGTAATTTTGGGGGCTTTCACAATCAAAACAATTTGAGTACATTATATATATAAAAAAACTACTGAAGATGGAAATTACATAAATTTATTATTTGTTTTGAAAATGGAAAAATATGAATATTAAATTTAAATTAGAC

mRNA sequence

CTTTTTGACATTTGACAATTTCTGTTCCTTTAAGAACAAACACTGTATTTGACGACGGACTTCTATGAACTAAAGTATCAACATCTTCCTCTTCTCTCTGTGCAAACTACAACTACAAAAAGAAAACTTTACAGTGATACCCCATTCCCATCAAAACAAAAACATGAACAGAGCAAAACCCATTTCAGAAATTCGCAGGCTTCTTATAAATCAAACCCGAACAATTTTCCTTGTAGAATTTCACGAACAGCAAAAGGATAACGGAATTAAGCACAGAATTGCAAGCCCAAGCGCCAATGCCGTTGCACCCGCCTTTCAGAACGTGAAATGAATACATCCCAAGATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGATTGGGAGTGGCTCCATCTGAAATTGACAATGGAAGGGTGCTCCGACAGCCAGTATCGAGAAACCGTCGGCATTGTAATTTTGGGGGCTTTCACAATCAAAACAATTTGAGTACATTATATATATAAAAAAACTACTGAAGATGGAAATTACATAAATTTATTATTTGTTTTGAAAATGGAAAAATATGAATATTAAATTTAAATTAGAC

Coding sequence (CDS)

ATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGA

Protein sequence

MIEQVTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDGGEEVERDGADEERPRGAP
BLAST of Bhi04M000251 vs. TrEMBL
Match: tr|A0A2P5FXT1|A0A2P5FXT1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_015860 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 71/168 (42.26%), Postives = 95/168 (56.55%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D G+ E  GE GE+L+RL E EPEE  E E
Sbjct: 86  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGGVGERGGEYGEHLERLGELEPEERHEGE 145

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSG 124
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+        
Sbjct: 146 DRLVEELAKRQPAAPCDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEXXXXXXXX 205

Query: 125 SAPS--PEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRA 171
             P+  PEPP V +LG  GEE + ED GGD  H E V+G + A+ DRA
Sbjct: 206 XXPAAEPEPPRVADLGGGGEECSGEDRGGDQGHREAVDGGDGAQGDRA 253

BLAST of Bhi04M000251 vs. TrEMBL
Match: tr|A0A2P5ALW9|A0A2P5ALW9_PARAD (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_320400 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D  + E  GE GE+L+RL E EPEE  E E
Sbjct: 84  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGCVGERGGEYGEHLERLGELEPEERHEGE 143

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWG 122
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+PL+ G
Sbjct: 144 DRVVEELAKRQPAAPYDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEPLERG 200

BLAST of Bhi04M000251 vs. NCBI nr
Match: POO02602.1 (hypothetical protein TorRG33x02_015860 [Trema orientalis])

HSP 1 Score: 97.4 bits (241), Expect = 5.7e-17
Identity = 71/168 (42.26%), Postives = 95/168 (56.55%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D G+ E  GE GE+L+RL E EPEE  E E
Sbjct: 86  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGGVGERGGEYGEHLERLGELEPEERHEGE 145

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSG 124
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+        
Sbjct: 146 DRLVEELAKRQPAAPCDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEXXXXXXXX 205

Query: 125 SAPS--PEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRA 171
             P+  PEPP V +LG  GEE + ED GGD  H E V+G + A+ DRA
Sbjct: 206 XXPAAEPEPPRVADLGGGGEECSGEDRGGDQGHREAVDGGDGAQGDRA 253

BLAST of Bhi04M000251 vs. NCBI nr
Match: RAL40495.1 (hypothetical protein DM860_006565 [Cuscuta australis])

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11
Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 0

Query: 25  PDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDEDGMIEEVEQWEATAAEDGEK 84
           P   QE   +  G  E  GE+  +L+RL E +PEEG   EDG++EEVE  EA   +D + 
Sbjct: 145 PHVPQEPAPVHGGEPESGGEDRHHLERLGELQPEEGHAYEDGVVEEVEGREAAPPQDHQV 204

Query: 85  GAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEED 144
           GA+ +E +  V+ VRPE+    G+  + KT++PL+  G G  P P PP V + G  G E 
Sbjct: 205 GAQHVEEAGHVERVRPEKDPTRGSGPHGKTQEPLE-RGRGPGPLPHPPRVADFGCGGGEG 264

Query: 145 TSEDDGGDYSHGETVNGR 163
             ED      HGE + GR
Sbjct: 265 PEEDXXXXXGHGEAMEGR 281

BLAST of Bhi04M000251 vs. NCBI nr
Match: PON37451.1 (hypothetical protein PanWU01x14_320400, partial [Parasponia andersonii])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D  + E  GE GE+L+RL E EPEE  E E
Sbjct: 84  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGCVGERGGEYGEHLERLGELEPEERHEGE 143

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWG 122
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+PL+ G
Sbjct: 144 DRVVEELAKRQPAAPYDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEPLERG 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2P5FXT1|A0A2P5FXT1_9ROSA3.8e-1742.26Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_015860 PE=4 S... [more]
tr|A0A2P5ALW9|A0A2P5ALW9_PARAD1.1e-0841.88Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
Match NameE-valueIdentityDescription
POO02602.15.7e-1742.26hypothetical protein TorRG33x02_015860 [Trema orientalis][more]
RAL40495.11.6e-1139.86hypothetical protein DM860_006565 [Cuscuta australis][more]
PON37451.11.7e-0841.88hypothetical protein PanWU01x14_320400, partial [Parasponia andersonii][more]

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi04G000251Bhi04G000251gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M000251.utr5p1Bhi04M000251.utr5p1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M000251.exon1Bhi04M000251.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi04M000251cds.Bhi04M000251CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M000251.utr3p1Bhi04M000251.utr3p1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi04M000251Bhi04M000251-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..76