Bhi03M001889 (mRNA) Wax gourd

NameBhi03M001889
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr3 : 52136724 .. 52137191 (-)
Sequence length468
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAACATACAACAAAAATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTCTACATACTATCAAGCAGATGATAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACAAATTCCTCCATCTGCACCGAGTCAAAGAGCTTCAGACAATCTACCTCCTTCACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGAATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTACATCTGGGCCGAGTAAAAAAACTTCAGACTACCCACCACCTCCACCTCATTCTCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAAAATGCCTATTCCACCATTTACTGCAAATGGACGAGTGCCATTATGA

mRNA sequence

ATGGGCAAACATACAACAAAAATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTCTACATACTATCAAGCAGATGATAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACAAATTCCTCCATCTGCACCGAGTCAAAGAGCTTCAGACAATCTACCTCCTTCACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGAATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTACATCTGGGCCGAGTAAAAAAACTTCAGACTACCCACCACCTCCACCTCATTCTCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAAAATGCCTATTCCACCATTTACTGCAAATGGACGAGTGCCATTATGA

Coding sequence (CDS)

ATGGGCAAACATACAACAAAAATGATGTTGATTAATCCTTCAAATGTGTTTTTCGGAGCTTGTGCTCTCATACTCCTTGGGATGCATTCTACATACTATCAAGCAGATGATAGAAATGTTGTTGTAGTCGATCAAGACTATGTAGCTCCACCTTTCAGCTTAGGAATACTATCAAAAGAGGTACAAATTCCTCCATCTGCACCGAGTCAAAGAGCTTCAGACAATCTACCTCCTTCACCACATTTCCCACCAGTCATTTTACATAAGGAATCTAGAATCAACTTTGGAATATTACCAAAAGGCGTGCATATTCCTACATCTGGGCCGAGTAAAAAAACTTCAGACTACCCACCACCTCCACCTCATTCTCCTTCTATTATTTTAAATAAAGAATCTAAGTTTAATTTTGTCATGTATCCTAAAATGCCTATTCCACCATTTACTGCAAATGGACGAGTGCCATTATGA

Protein sequence

MGKHTTKMMLINPSNVFFGACALILLGMHSTYYQADDRNVVVVDQDYVAPPFSLGILSKEVQIPPSAPSQRASDNLPPSPHFPPVILHKESRINFGILPKGVHIPTSGPSKKTSDYPPPPPHSPSIILNKESKFNFVMYPKMPIPPFTANGRVPL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi03G001889Bhi03G001889gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi03M001889cds.Bhi03M001889CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi03M001889.exon1Bhi03M001889.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi03M001889Bhi03M001889-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..124
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 6.0