Bhi03M000578 (mRNA) Wax gourd

Overview
NameBhi03M000578
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionProtein kinase
Locationchr3 : 14423448 .. 14423633 (-)
Sequence length186
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGATGCCCCATGAAGACTCGCTTTCGCTACGGCTCCGGTGGATCCCTTAACCAAGCCACTGCCTATGAGTTCACCGGCTCATTCTTCAACAGGCACGCGGTCAGATTCCTGGTCTCCTCCAACTCTTGGAAGCTTACGGTTTCAATGTTCTAA

mRNA sequence

ATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGATGCCCCATGAAGACTCGCTTTCGCTACGGCTCCGGTGGATCCCTTAACCAAGCCACTGCCTATGAGTTCACCGGCTCATTCTTCAACAGGCACGCGGTCAGATTCCTGGTCTCCTCCAACTCTTGGAAGCTTACGGTTTCAATGTTCTAA

Coding sequence (CDS)

ATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGATGCCCCATGAAGACTCGCTTTCGCTACGGCTCCGGTGGATCCCTTAACCAAGCCACTGCCTATGAGTTCACCGGCTCATTCTTCAACAGGCACGCGGTCAGATTCCTGGTCTCCTCCAACTCTTGGAAGCTTACGGTTTCAATGTTCTAA

Protein sequence

MDRSPRFGSISRCPMKTRFRYGSGGSLNQATAYEFTGSFFNRHAVRFLVSSNSWKLTVSMF
Homology
[Close]
BLAST of Bhi03M000578 vs. TrEMBL
Match: tr|A0A287U4L0|A0A287U4L0_HORVV (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-05
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 1  MDRSPRFGSIS--RCPMKTRFRYGSGG--SLNQATAYE 35
          MDRSPRFGSIS    P+KTRFRYGSGG  SLNQATAYE
Sbjct: 1  MDRSPRFGSISSDNRPIKTRFRYGSGGFRSLNQATAYE 38

[Close]
BLAST of Bhi03M000578 vs. TrEMBL
Match: tr|T2ASC0|T2ASC0_WHEAT (Protein kinase OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-05
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 1  MDRSPRFGSIS--RCPMKTRFRYGSGG--SLNQATAYE 35
          MDRSPRFGSIS    P+KTRFRYGSGG  SLNQATAYE
Sbjct: 1  MDRSPRFGSISSDNRPIKTRFRYGSGGFRSLNQATAYE 38

[Close]
BLAST of Bhi03M000578 vs. TrEMBL
Match: tr|A0A287HU18|A0A287HU18_HORVV (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-04
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 1  MDRSPRFGSIS--RCPMKTRFRYGSGG--SLNQATAYE 35
          MDRSPRFGSIS    P+KTRF YGSGG  SLNQATAYE
Sbjct: 5  MDRSPRFGSISSDNRPIKTRFCYGSGGFRSLNQATAYE 42

[Close]
BLAST of Bhi03M000578 vs. NCBI nr
Match: AGU99598.1 (protein kinase [Triticum aestivum])

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-05
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 1  MDRSPRFGSIS--RCPMKTRFRYGSGG--SLNQATAYE 35
          MDRSPRFGSIS    P+KTRFRYGSGG  SLNQATAYE
Sbjct: 1  MDRSPRFGSISSDNRPIKTRFRYGSGGFRSLNQATAYE 38

The following BLAST results are available for this feature:
BLAST of Bhi03M000578 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi03M000578 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi03M000578 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A287U4L0|A0A287U4L0_HORVV2.9e-0581.58Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1[more]
tr|T2ASC0|T2ASC0_WHEAT2.9e-0581.58Protein kinase OS=Triticum aestivum OX=4565 PE=2 SV=1[more]
tr|A0A287HU18|A0A287HU18_HORVV2.5e-0478.95Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1[more]
BLAST of Bhi03M000578 vs. NCBI nr
Match NameE-valueIdentityDescription
AGU99598.14.4e-0581.58protein kinase [Triticum aestivum][more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi03G000578Bhi03G000578gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi03M000578cds.Bhi03M000578CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi03M000578.exon1Bhi03M000578.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi03M000578Bhi03M000578-proteinpolypeptide